##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936346.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 170271 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.816709833148334 31.0 31.0 34.0 30.0 34.0 2 31.92394477039543 33.0 31.0 34.0 30.0 34.0 3 31.73161607085176 33.0 31.0 34.0 30.0 34.0 4 35.56186902056134 37.0 35.0 37.0 33.0 37.0 5 35.665415719646916 37.0 35.0 37.0 35.0 37.0 6 35.64198835973243 37.0 35.0 37.0 33.0 37.0 7 26.93782264742675 35.0 17.0 37.0 0.0 37.0 8 31.121212655120367 35.0 23.0 37.0 17.0 37.0 9 35.791362005273946 38.0 32.0 39.0 32.0 39.0 10 36.52650187054754 37.0 35.0 39.0 32.0 39.0 11 36.87347816128407 39.0 37.0 39.0 33.0 39.0 12 36.944688173558625 39.0 37.0 39.0 33.0 39.0 13 36.90606738669533 39.0 37.0 39.0 33.0 39.0 14 38.09791450100135 40.0 37.0 41.0 33.0 41.0 15 38.12292756840566 40.0 37.0 41.0 33.0 41.0 16 38.092699285257034 40.0 37.0 41.0 33.0 41.0 17 37.93409917132101 40.0 37.0 41.0 33.0 41.0 18 37.8064497183901 40.0 36.0 41.0 33.0 41.0 19 37.63969789335823 39.0 36.0 41.0 32.0 41.0 20 37.72529673285527 39.0 36.0 41.0 33.0 41.0 21 37.72431594340786 39.0 36.0 41.0 33.0 41.0 22 37.73013020420389 39.0 36.0 41.0 33.0 41.0 23 37.71120155516794 39.0 36.0 41.0 33.0 41.0 24 37.64778500155634 39.0 36.0 41.0 33.0 41.0 25 37.553670325539876 39.0 36.0 41.0 33.0 41.0 26 37.42756546916386 39.0 35.0 41.0 33.0 41.0 27 37.301531088676285 39.0 35.0 41.0 32.0 41.0 28 37.27198994543992 39.0 35.0 41.0 32.0 41.0 29 37.228670766014176 39.0 35.0 41.0 32.0 41.0 30 37.08825343129482 39.0 35.0 41.0 32.0 41.0 31 36.96246571641677 39.0 35.0 41.0 31.0 41.0 32 36.842985593553806 39.0 35.0 41.0 31.0 41.0 33 36.69772891449513 39.0 35.0 41.0 31.0 41.0 34 36.57853656817661 39.0 35.0 41.0 30.0 41.0 35 36.33266968538389 39.0 35.0 41.0 30.0 41.0 36 36.156750121864555 39.0 35.0 40.0 29.0 41.0 37 36.101943372623644 39.0 35.0 40.0 29.0 41.0 38 35.99800318316096 39.0 35.0 40.0 29.0 41.0 39 36.00756441202554 39.0 35.0 40.0 29.0 41.0 40 35.76531529150589 38.0 35.0 40.0 28.0 41.0 41 35.703507937346934 38.0 35.0 40.0 27.0 41.0 42 35.63195141862091 38.0 35.0 40.0 27.0 41.0 43 35.61259991425434 38.0 35.0 40.0 27.0 41.0 44 35.408219837787996 38.0 34.0 40.0 26.0 41.0 45 35.32333750315673 38.0 34.0 40.0 26.0 41.0 46 35.084435987337834 38.0 34.0 40.0 25.0 41.0 47 34.88735016532469 38.0 34.0 40.0 24.0 41.0 48 34.773778271108995 38.0 34.0 40.0 23.0 41.0 49 34.59496919616376 38.0 34.0 40.0 23.0 41.0 50 34.362304796471506 37.0 33.0 40.0 23.0 41.0 51 31.915217506210688 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 9.0 10 9.0 11 11.0 12 8.0 13 2.0 14 10.0 15 9.0 16 24.0 17 48.0 18 73.0 19 117.0 20 221.0 21 342.0 22 518.0 23 796.0 24 1117.0 25 1613.0 26 2059.0 27 2359.0 28 2778.0 29 3139.0 30 3821.0 31 4799.0 32 6245.0 33 8280.0 34 12184.0 35 14927.0 36 16492.0 37 25176.0 38 30662.0 39 32405.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.84464177693207 20.02924749370122 23.504296092699285 13.621814636667432 2 31.16032677320272 27.707595538876262 24.102166546270357 17.029911141650665 3 30.19715629790158 27.344057414357113 26.54885447316337 15.909931814577938 4 27.5425645001204 23.748025206876097 30.88077241573727 17.82863787726624 5 26.896535522784266 28.01240375636485 25.055940236446606 20.035120484404274 6 23.47962953174645 35.69662479224295 26.438442247945922 14.385303428064674 7 57.72738751754556 27.07801093550869 10.571970564570595 4.622630982375155 8 75.36162940254066 7.758808017806908 11.44410968397437 5.435452895678066 9 69.7687803560207 7.6918559237920725 12.550581132430066 9.988782587757164 10 38.90915070681443 24.702386196122653 20.97303709968227 15.415425997380646 11 29.034891437766852 24.812798421340098 26.887138737659377 19.26517140323367 12 28.03295922382555 21.45462233733284 30.605329151763954 19.90708928707766 13 23.440280494035978 23.838469263703153 33.3621109877783 19.35913925448256 14 19.494218040652843 27.689976566767093 29.711459966758873 23.10434542582119 15 17.848018746586327 26.062570842950354 37.037428569750574 19.051981840712745 16 20.768657023215933 26.265776321276086 30.679328834622453 22.28623782088553 17 20.76219673344257 25.65498528815829 30.335171579423392 23.24764639897575 18 21.138068138438136 26.740901269153287 30.503139113530782 21.617891478877787 19 22.07950854813797 29.046637419172967 27.405723816739197 21.46813021594987 20 23.896024572593102 27.597183313658814 29.37141380505195 19.13537830869614 21 22.5681413746322 29.177605111851108 28.509258769843367 19.74499474367332 22 20.57249913373387 25.22214587334308 28.65255974299793 25.55279524992512 23 21.035878100204965 28.143958748113302 29.44658808605106 21.37357506563067 24 22.74609299293479 23.488439017801035 29.68385691045451 24.08161107880966 25 20.63710203146748 29.389032777161113 27.076836337368075 22.897028854003324 26 20.816815546980987 26.925313177229242 28.25554557147136 24.002325704318412 27 21.576780543956396 29.0713039801258 27.477961602386785 21.87395387353102 28 18.50520640625826 26.8472024008786 31.796371666343653 22.85121952651949 29 23.375677596302367 25.20393960216361 28.532750732655593 22.887632068878435 30 21.165083895672193 29.75139630353965 28.583845751772174 20.49967404901598 31 21.363590981435475 26.819599344574236 29.397842263215697 22.41896741077459 32 24.009373293162074 27.73989698774307 28.77001955705904 19.480710162035813 33 21.219115410140304 28.657845434630673 26.85659918600349 23.266439969225527 34 22.070699062083385 25.2133363872885 31.758784525844096 20.95718002478402 35 22.81656888137146 26.578219426678647 28.192704570948663 22.412507121001227 36 22.24865068038597 28.047054401512884 28.308402487798862 21.395892430302283 37 20.36694445912692 28.165101514644302 32.09765608941041 19.370297936818364 38 20.422737870805953 28.448179666531587 28.32132306734558 22.807759395316875 39 21.7036371431424 25.556906343417257 30.565392814983174 22.174063698457168 40 24.13446799513716 25.52460489455045 29.963411267919966 20.37751584239242 41 19.672756958025737 25.968602991701463 29.313271197091694 25.045368853181106 42 21.392368635880448 24.915575758643573 30.5577579270692 23.134297678406774 43 22.38020567213442 25.29555825713128 27.92019780232688 24.404038268407422 44 21.21852811107 25.982110870318493 28.143958748113302 24.655402270498207 45 20.768657023215933 24.509752101062425 28.725972126786125 25.995618748935524 46 22.72671212361471 27.6059927997134 26.97288440192399 22.694410674747903 47 19.818994426531823 24.29303874411967 33.55474508283854 22.333221746509977 48 20.895513622401936 24.991337338712995 30.212426073729524 23.900722965155545 49 20.281786093932613 23.74097761803243 32.34314710079814 23.634089187236818 50 19.4689641806297 23.691057197056455 31.20907259603808 25.630906026275763 51 19.57761450863623 23.65112086027568 28.532163433585282 28.2391011975028 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 77.0 1 206.5 2 336.0 3 1123.0 4 1910.0 5 1339.5 6 769.0 7 641.0 8 513.0 9 519.0 10 525.0 11 547.5 12 570.0 13 559.0 14 548.0 15 550.0 16 552.0 17 544.5 18 537.0 19 540.0 20 543.0 21 598.5 22 654.0 23 737.5 24 821.0 25 1040.5 26 1530.5 27 1801.0 28 2006.0 29 2211.0 30 2535.5 31 2860.0 32 3355.0 33 3850.0 34 4418.0 35 4986.0 36 5330.0 37 5674.0 38 6446.0 39 7218.0 40 7981.0 41 8744.0 42 10190.5 43 11637.0 44 16504.0 45 21371.0 46 18746.5 47 16122.0 48 15201.0 49 14280.0 50 12325.5 51 10371.0 52 9220.5 53 8070.0 54 7694.5 55 7319.0 56 6995.5 57 6672.0 58 6612.0 59 6552.0 60 6170.5 61 5789.0 62 5455.5 63 5122.0 64 4295.0 65 3468.0 66 2864.0 67 2260.0 68 1910.0 69 1560.0 70 1345.5 71 1131.0 72 899.0 73 667.0 74 539.5 75 305.5 76 199.0 77 167.0 78 135.0 79 102.5 80 70.0 81 59.5 82 49.0 83 40.0 84 31.0 85 20.0 86 9.0 87 6.5 88 4.0 89 3.5 90 3.0 91 4.0 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 170271.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.369117465687054 #Duplication Level Percentage of deduplicated Percentage of total 1 74.89039690312951 37.72163198665657 2 9.44335618674502 9.51307034080965 3 4.503054894827667 6.804447028560354 4 2.8776642880462666 5.797816422056604 5 2.0859568117158713 5.253390183883339 6 1.450492047945525 4.383600260760788 7 1.1286786996875144 3.9795385003905537 8 0.8570029382957884 3.4533185333967618 9 0.6949302737745441 3.1502722131190866 >10 2.015997388181521 13.299387447069671 >50 0.026817779021500864 1.0072179055740555 >100 0.020987827060305022 2.452560917596067 >500 0.001165990392239168 0.5820133786728215 >1k 0.003497971176717504 2.6017348814536825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCG 1629 0.9567101855277763 No Hit GAATCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTC 1500 0.8809486054583575 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGC 1301 0.7640760904675488 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 991 0.5820133786728215 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCG 431 0.2531258993017014 No Hit GAATGACTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCT 412 0.24196721696589557 No Hit GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 399 0.2343323290519231 Illumina Single End Adapter 2 (95% over 21bp) GAATCTATCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTC 339 0.1990943848335888 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGC 312 0.18323730993533838 No Hit CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 274 0.16091994526372663 Illumina Single End Adapter 2 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTC 266 0.15622155270128207 No Hit GAACTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 233 0.1368406833811982 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 226 0.1327295898890592 No Hit CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 213 0.12509470197508676 Illumina Single End Adapter 2 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTT 176 0.10336463637378061 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.872990703055717E-4 0.0 0.0 0.17266592666983807 0.0 2 5.872990703055717E-4 0.0 0.0 0.937916615277998 0.0 3 5.872990703055717E-4 0.0 0.0 1.2996928425862302 0.0 4 5.872990703055717E-4 0.0 0.0 1.7824526783774102 0.0 5 5.872990703055717E-4 0.0 0.0 3.74403157319802 0.0 6 5.872990703055717E-4 0.0 0.0 4.503996570173429 0.0 7 5.872990703055717E-4 0.0 0.0 5.38846897005362 0.0 8 5.872990703055717E-4 0.0 0.0 6.730447345701852 0.0 9 5.872990703055717E-4 0.0 0.0 7.183842227977753 0.0 10 5.872990703055717E-4 0.0 0.0 9.449054742146343 0.0 11 5.872990703055717E-4 0.0 0.0 10.779874435458769 0.0 12 5.872990703055717E-4 0.0 0.0 12.742040629349685 0.0 13 5.872990703055717E-4 0.0 0.0 13.213641782805057 0.0 14 5.872990703055717E-4 0.0 0.0 13.420958354622925 0.0 15 5.872990703055717E-4 0.0 0.0 13.850273975016298 0.0 16 5.872990703055717E-4 0.0 0.0 14.602016785007429 0.0 17 5.872990703055717E-4 0.0 0.0 15.418362492732173 0.0 18 5.872990703055717E-4 0.0 0.0 16.297549200979613 0.0 19 5.872990703055717E-4 0.0 0.0 16.820245373551575 0.0 20 5.872990703055717E-4 0.0 0.0 17.337068555420476 0.0 21 5.872990703055717E-4 0.0 0.0 17.98544672903783 0.0 22 5.872990703055717E-4 0.0 0.0 18.62971380916304 0.0 23 5.872990703055717E-4 0.0 0.0 19.32625050654545 0.0 24 5.872990703055717E-4 0.0 0.0 19.868914847507796 0.0 25 5.872990703055717E-4 0.0 0.0 20.37340474890028 0.0 26 5.872990703055717E-4 0.0 0.0 20.7862759953251 0.0 27 5.872990703055717E-4 0.0 0.0 21.224988400843362 0.0 28 5.872990703055717E-4 0.0 0.0 21.69071656359568 0.0 29 5.872990703055717E-4 0.0 0.0 22.208714343605195 0.0 30 5.872990703055717E-4 0.0 0.0 22.726124824544403 0.0 31 5.872990703055717E-4 0.0 0.0 23.223567137093223 0.0 32 5.872990703055717E-4 0.0 0.0 23.69986668311104 0.0 33 5.872990703055717E-4 0.0 0.0 24.1697059393555 0.0 34 5.872990703055717E-4 0.0 0.0 24.590799372764593 0.0 35 5.872990703055717E-4 0.0 0.0 25.077670302047913 0.0 36 5.872990703055717E-4 0.0 0.0 25.517557305706784 0.0 37 5.872990703055717E-4 0.0 0.0 26.01030122569316 0.0 38 5.872990703055717E-4 0.0 0.0 26.48131508007823 0.0 39 5.872990703055717E-4 0.0 0.0 26.963487616799103 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGG 25 3.8767706E-5 45.000004 3 CACATCC 25 3.8767706E-5 45.000004 45 AAACGGC 50 2.1827873E-11 45.000004 6 CGTTTTC 25 3.8767706E-5 45.000004 1 TCGGGAT 20 7.016348E-4 45.0 6 TGCGGGC 20 7.016348E-4 45.0 4 ATCGTTG 20 7.016348E-4 45.0 23 TGACCGG 20 7.016348E-4 45.0 2 AGTGACG 20 7.016348E-4 45.0 10 TACGAAT 45 3.8016879E-10 45.0 12 CGGCTTC 20 7.016348E-4 45.0 42 CCGGTCG 20 7.016348E-4 45.0 14 ATTATCC 20 7.016348E-4 45.0 45 GACGAGA 20 7.016348E-4 45.0 13 GGCGAAC 20 7.016348E-4 45.0 8 CTTAGGT 20 7.016348E-4 45.0 4 GACCTAT 40 6.7557266E-9 45.0 33 TGCATAT 65 0.0 44.999996 27 AGTTAAT 75 0.0 42.0 39 GCATATC 70 0.0 41.785717 28 >>END_MODULE