##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936344.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 77210 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72257479601088 31.0 31.0 34.0 30.0 34.0 2 31.827936795751846 31.0 31.0 34.0 30.0 34.0 3 31.76705090014247 31.0 31.0 34.0 30.0 34.0 4 35.54592669343349 37.0 35.0 37.0 33.0 37.0 5 35.60277166170185 37.0 35.0 37.0 33.0 37.0 6 35.541030954539565 37.0 35.0 37.0 33.0 37.0 7 27.009869187929024 35.0 19.0 37.0 0.0 37.0 8 30.98570133402409 35.0 23.0 37.0 17.0 37.0 9 35.52902473772827 38.0 32.0 39.0 30.0 39.0 10 36.42271726460303 37.0 35.0 39.0 32.0 39.0 11 36.73445149592022 38.0 35.0 39.0 33.0 39.0 12 36.700297888874495 39.0 35.0 39.0 33.0 39.0 13 36.50450718818806 39.0 35.0 39.0 32.0 39.0 14 37.77710141173423 39.0 36.0 41.0 33.0 41.0 15 37.707732159046756 39.0 36.0 41.0 33.0 41.0 16 37.73671804170444 39.0 36.0 41.0 33.0 41.0 17 37.534671674653545 39.0 36.0 41.0 32.0 41.0 18 37.452415490221476 39.0 36.0 41.0 32.0 41.0 19 37.34713120062168 39.0 36.0 41.0 32.0 41.0 20 37.49664551223935 39.0 36.0 41.0 32.0 41.0 21 37.52506152052843 39.0 36.0 41.0 33.0 41.0 22 37.55328325346458 39.0 36.0 41.0 33.0 41.0 23 37.61973837585805 39.0 36.0 41.0 33.0 41.0 24 37.5216293226266 39.0 36.0 41.0 33.0 41.0 25 37.48305918922419 39.0 36.0 41.0 33.0 41.0 26 37.24685921512757 39.0 35.0 41.0 32.0 41.0 27 37.18558476881233 39.0 35.0 40.0 32.0 41.0 28 37.18593446444761 39.0 35.0 40.0 32.0 41.0 29 37.1289599792773 39.0 35.0 40.0 32.0 41.0 30 37.034671674653545 39.0 35.0 40.0 32.0 41.0 31 36.89077839658076 39.0 35.0 40.0 31.0 41.0 32 36.82721150110089 39.0 35.0 40.0 31.0 41.0 33 36.732651210983036 39.0 35.0 40.0 31.0 41.0 34 36.471260199456026 38.0 35.0 40.0 30.0 41.0 35 36.59040279756508 39.0 35.0 40.0 30.0 41.0 36 36.165431938868025 38.0 35.0 40.0 30.0 41.0 37 36.06496567802098 38.0 35.0 40.0 30.0 41.0 38 35.93811682424556 38.0 35.0 40.0 30.0 41.0 39 35.53797435565341 38.0 34.0 40.0 27.0 41.0 40 35.28283901049087 38.0 34.0 40.0 25.0 41.0 41 35.1298277425204 38.0 34.0 40.0 25.0 41.0 42 35.037883693822046 38.0 34.0 40.0 24.0 41.0 43 35.0853904934594 38.0 34.0 40.0 25.0 41.0 44 34.59162025644346 38.0 33.0 40.0 23.0 41.0 45 34.61678539049346 38.0 33.0 40.0 23.0 41.0 46 34.051210983033286 37.0 33.0 40.0 22.0 41.0 47 33.693498251521824 37.0 32.0 40.0 21.0 41.0 48 33.631097008159564 37.0 32.0 40.0 20.0 41.0 49 33.35688382333895 37.0 32.0 40.0 18.0 41.0 50 33.14821914259811 36.0 31.0 40.0 17.0 41.0 51 30.22157751586582 34.0 26.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 6.0 11 1.0 12 0.0 13 0.0 14 2.0 15 2.0 16 9.0 17 8.0 18 31.0 19 42.0 20 62.0 21 121.0 22 170.0 23 300.0 24 470.0 25 689.0 26 963.0 27 1217.0 28 1467.0 29 1862.0 30 2350.0 31 2786.0 32 3389.0 33 4323.0 34 6167.0 35 7777.0 36 7520.0 37 10521.0 38 12653.0 39 12297.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.86931744592669 18.500194275352932 21.08405646936925 11.546431809351121 2 26.01735526486206 34.39450848335708 22.333894573241807 17.25424167853905 3 27.853904934593963 34.18598627120839 23.666623494366014 14.293485299831628 4 26.429219013081205 21.052972412899884 35.70651470016838 16.811293873850538 5 30.055692267840957 24.788239865302423 22.756119673617405 22.399948193239215 6 22.11760134697578 37.52363683460692 26.702499676207747 13.656262142209558 7 53.81168242455641 26.60277166170185 14.341406553555238 5.244139360186504 8 66.98873202952986 12.200492164227432 13.649786297111774 7.160989509130941 9 62.57997668695765 6.536718041704442 13.442559253982644 17.440746017355266 10 40.52583862194016 21.21616370936407 22.45564046108017 15.802357207615595 11 29.518197124724775 22.87268488537754 27.176531537365626 20.432586452532057 12 26.926563916591117 19.408107758062425 32.039891205802356 21.6254371195441 13 18.904287009454734 25.876181841730343 37.83706773733972 17.382463411475197 14 19.309674912576092 30.47532703017744 27.842248413417952 22.37274964382852 15 15.295946120968788 24.030565988861547 43.75080948063722 16.922678409532445 16 16.4926822950395 26.451236886413675 30.181323662737984 26.874757155808833 17 17.228338298147907 23.604455381427275 32.69783706773734 26.469369252687475 18 17.38634891853387 26.636446056210332 33.468462634373786 22.508742390882013 19 18.581789923585028 27.909597202434917 28.144022794974745 25.36459007900531 20 20.32508742390882 27.90441652635669 33.16021240771921 18.610283642015283 21 20.323792254889263 30.6242714674265 30.084185986271205 18.96775029141303 22 17.39930060872944 23.73915295946121 29.923585027846133 28.937961403963218 23 17.171350861287397 29.825152182359798 30.121745887838365 22.88175106851444 24 22.91801580106204 21.927211501100892 28.416008289081724 26.738764408755344 25 17.541769200880715 32.67452402538532 26.917497733454216 22.866209040279756 26 17.480896256961532 26.829426240124338 28.605102965937057 27.084574536977073 27 22.524284419116693 28.909467685532963 25.779044165263564 22.787203730086777 28 15.071881880585417 23.974873721020593 36.05361999740966 24.89962440098433 29 20.77321590467556 25.795881362517807 27.379873073436084 26.05102965937055 30 22.41808055951302 27.076803522859734 29.453438673746923 21.051677243880327 31 22.29762984069421 26.278979406812592 27.67128610283642 23.75210464965678 32 23.38039114104391 26.83719725424168 22.822173293614817 26.960238311099598 33 19.257868151793808 22.480248672451754 23.710659241030953 34.55122393472348 34 18.919829037689418 29.975391788628414 26.530242196606658 24.57453697707551 35 19.1918145317964 23.372620126926563 23.550058282605878 33.88550705867115 36 19.71765315373656 26.457712731511464 28.296852739282475 25.527781375469498 37 20.452013987825413 24.325864525320554 30.085481155290765 25.13664033156327 38 16.297111773086385 24.38932780727885 26.49786297111773 32.815697448517035 39 20.3678280015542 26.203859603678282 27.110477917368215 26.3178344773993 40 19.79406812589043 22.476363165393085 28.375858049475454 29.353710659241035 41 17.49125760911799 28.510555627509387 24.19505245434529 29.803134309027328 42 18.1453179639943 21.077580624271466 31.994560290117864 28.782541121616372 43 23.37909597202435 21.460950654060355 24.86465483745629 30.295298536459008 44 19.82126667530113 22.305400854811552 29.51301644864655 28.360316021240774 45 18.34347882398653 22.31576220696801 26.830721409143894 32.51003755990157 46 26.105426758191946 25.692267840953242 24.56029011786038 23.64201528299443 47 16.33726201269266 21.67335837326771 36.59629581660407 25.393083797435565 48 21.209687864266286 23.034581012822173 26.44087553425722 29.31485558865432 49 17.9251392306696 18.934075896904545 36.514700168371974 26.62608470405388 50 19.89509130941588 20.10102318352545 31.845615852868796 28.158269654189873 51 18.439321331433753 20.463670509001425 26.242714674264995 34.854293485299834 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 41.0 1 82.0 2 123.0 3 232.5 4 342.0 5 259.0 6 176.0 7 155.5 8 135.0 9 147.0 10 159.0 11 151.0 12 143.0 13 145.0 14 147.0 15 152.0 16 157.0 17 152.0 18 147.0 19 184.5 20 222.0 21 229.0 22 236.0 23 311.0 24 386.0 25 429.5 26 528.5 27 584.0 28 751.5 29 919.0 30 1065.0 31 1211.0 32 1244.5 33 1278.0 34 1504.5 35 1731.0 36 1930.5 37 2130.0 38 2321.5 39 2513.0 40 2846.5 41 3180.0 42 3634.0 43 4088.0 44 4593.0 45 5098.0 46 5703.5 47 6309.0 48 10407.0 49 14505.0 50 11384.0 51 8263.0 52 7771.5 53 7280.0 54 5921.0 55 4562.0 56 3788.0 57 3014.0 58 2632.0 59 2250.0 60 1959.0 61 1668.0 62 1489.5 63 1311.0 64 1103.5 65 896.0 66 733.0 67 570.0 68 464.5 69 359.0 70 304.5 71 250.0 72 204.0 73 158.0 74 122.5 75 65.5 76 44.0 77 37.5 78 31.0 79 23.5 80 16.0 81 11.5 82 7.0 83 6.5 84 6.0 85 3.5 86 1.0 87 1.0 88 1.0 89 2.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 77210.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.803263825929285 #Duplication Level Percentage of deduplicated Percentage of total 1 75.09089461532338 36.6468074083668 2 9.936042037100925 9.698225618443207 3 4.588519412966747 6.71804170444243 4 2.79716568031634 5.460432586452532 5 1.942623603407553 4.740318611578811 6 1.374698123722831 4.025385312783318 7 1.0854276691170617 3.7080689029918403 8 0.7775802128393621 3.0358761818417306 9 0.6024256256468777 2.6460303069550575 >10 1.7303150128712081 11.115140525838623 >50 0.03184628858045169 1.0775806242714674 >100 0.034500145962156 4.583603160212408 >500 0.0 0.0 >1k 0.007961572145112922 6.544489055821785 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCG 1747 2.2626602771661704 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGC 1686 2.1836549669731897 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1620 2.0981738116824244 RNA PCR Primer, Index 16 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 450 0.5828260588006734 Illumina PCR Primer Index 7 (95% over 22bp) GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGC 412 0.5336096360575056 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCT 410 0.5310192980183914 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCG 410 0.5310192980183914 No Hit GAATCTATCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 350 0.45330915684496825 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTC 273 0.3535811423390752 No Hit GAACTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCT 228 0.2952985364590079 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTT 216 0.2797565082243233 RNA PCR Primer, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 168 0.21758839528558477 RNA PCR Primer, Index 16 (96% over 25bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTCCACCTCGTA 167 0.2162932262660277 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 163 0.2111125501877995 No Hit CTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGCT 162 0.20981738116824244 RNA PCR Primer, Index 16 (96% over 26bp) GAATGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTT 130 0.1683719725424168 RNA PCR Primer, Index 16 (95% over 21bp) GAATGAATGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCT 94 0.1217458878383629 No Hit GAATCTATCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTT 88 0.1139748737210206 No Hit GCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTTC 87 0.11267970470146353 No Hit GCTGTCACTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 86 0.1113845356819065 Illumina PCR Primer Index 7 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3496956352804041 0.0 2 0.0 0.0 0.0 2.0968786426628676 0.0 3 0.0 0.0 0.0 2.605880067348789 0.0 4 0.0 0.0 0.0 3.4606916202564433 0.0 5 0.0 0.0 0.0 7.655744074601736 0.0 6 0.0 0.0 0.0 8.577904416526357 0.0 7 0.0 0.0 0.0 10.137287916073047 0.0 8 0.0 0.0 0.0 12.001036135215646 0.0 9 0.0 0.0 0.0 12.524284419116695 0.0 10 0.0 0.0 0.0 16.90713638129776 0.0 11 0.0 0.0 0.0 18.579199585545915 0.0 12 0.0 0.0 0.0 22.976298406942107 0.0 13 0.0 0.0 0.0 23.62517808574019 0.0 14 0.0 0.0 0.0 23.98134956611838 0.0 15 0.0 0.0 0.0 24.739023442559255 0.0 16 0.0 0.0 0.0 25.6844968268359 0.0 17 0.0 0.0 0.0 26.672710788757932 0.0 18 0.0 0.0 0.0 27.70237015930579 0.0 19 0.0 0.0 0.0 28.3745628804559 0.0 20 0.0 0.0 0.0 28.97293096749126 0.0 21 0.0 0.0 0.0 29.694340111384534 0.0 22 0.0 0.0 0.0 30.415749255277813 0.0 23 0.0 0.0 0.0 31.08405646936925 0.0 24 0.0 0.0 0.0 31.754954021499806 0.0 25 0.0 0.0 0.0 32.23287138971636 0.0 26 0.0 0.0 0.0 32.70431291283513 0.0 27 0.0 0.0 0.0 33.16021240771921 0.0 28 0.0 0.0 0.0 33.675689677502916 0.0 29 0.0 0.0 0.0 34.13417951042611 0.0 30 0.0 0.0 0.0 34.640590597072915 0.0 31 0.0 0.0 0.0 35.14441134568061 0.0 32 0.0 0.0 0.0 35.617148037818936 0.0 33 0.0 0.0 0.0 36.09377023701593 0.0 34 0.0 0.0 0.0 36.548374562880454 0.0 35 0.0 0.0 0.0 36.98484652247118 0.0 36 0.0 0.0 0.0 37.46017355264862 0.0 37 0.0 0.0 0.0 37.903121357337135 0.0 38 0.0 0.0 0.0 38.36679186633856 0.0 39 0.0 0.0 0.0 38.81362517808574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTCACT 40 6.673872E-9 45.0 3 CGTGGGG 40 6.673872E-9 45.0 4 CAACGCA 35 1.1923476E-7 45.0 17 ACGCAAG 35 1.1923476E-7 45.0 19 TTATGAC 35 1.1923476E-7 45.0 27 GGGTAAT 20 6.9924275E-4 45.0 8 AATGGGC 20 6.9924275E-4 45.0 4 ACTTATA 40 6.673872E-9 45.0 7 TGAAACC 50 2.1827873E-11 45.0 4 GACCCGC 25 3.856979E-5 45.0 31 ACGGGAC 25 3.856979E-5 45.0 5 AAACGGC 80 0.0 45.0 6 TCGTGGG 20 6.9924275E-4 45.0 3 TGACCCG 25 3.856979E-5 45.0 30 CTTATGA 35 1.1923476E-7 45.0 26 AACGCAA 35 1.1923476E-7 45.0 18 ACTAATC 20 6.9924275E-4 45.0 10 GACGGGA 20 6.9924275E-4 45.0 4 AGGGGTT 25 3.856979E-5 45.0 6 TGTAGGG 35 1.1923476E-7 45.0 3 >>END_MODULE