SRR2936343.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936343.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	125979
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCG	661	0.524690623040348	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGC	575	0.45642527722874443	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	510	0.4048293763246255	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTC	426	0.33815159669468725	No Hit
GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC	195	0.1547877027123568	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	186	0.14764365489486345	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTT	132	0.10477936798990307	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGATG	30	2.1500855E-6	45.000004	6
CTCTAAC	30	2.1500855E-6	45.000004	23
CCAGCGG	20	7.0093625E-4	45.0	2
TACGGTT	40	6.73208E-9	45.0	33
ACGGGCT	20	7.0093625E-4	45.0	5
AATGCGG	20	7.0093625E-4	45.0	2
CGGGCAA	20	7.0093625E-4	45.0	6
CGTACGG	40	6.73208E-9	45.0	31
GATTGTC	40	6.73208E-9	45.0	23
TTACGGG	25	3.8709888E-5	45.0	3
GCAATAG	20	7.0093625E-4	45.0	1
CGTTTTA	25	3.8709888E-5	45.0	1
GTACGGT	40	6.73208E-9	45.0	32
TAGTAGG	25	3.8709888E-5	45.0	2
ACGGTTA	40	6.73208E-9	45.0	34
TACGGCT	115	0.0	44.999996	7
ACATACG	50	1.0659278E-9	40.5	17
CGGCTGT	145	0.0	40.34483	9
CTATGGG	45	1.9050276E-8	40.0	3
CTCGTAC	45	1.9050276E-8	40.0	29