##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936341.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 181127 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86519955611256 31.0 31.0 34.0 30.0 34.0 2 31.9691597608308 33.0 31.0 34.0 30.0 34.0 3 31.696505766672004 33.0 31.0 34.0 30.0 34.0 4 35.5641014315922 37.0 35.0 37.0 33.0 37.0 5 35.71835231633053 37.0 35.0 37.0 35.0 37.0 6 35.69198959845854 37.0 35.0 37.0 35.0 37.0 7 27.013211724370194 35.0 18.0 37.0 0.0 37.0 8 31.222286020306193 35.0 23.0 37.0 17.0 37.0 9 35.93506213872035 39.0 32.0 39.0 32.0 39.0 10 36.61716916859441 38.0 35.0 39.0 32.0 39.0 11 36.9771155045907 39.0 37.0 39.0 33.0 39.0 12 37.03264560225698 39.0 37.0 39.0 33.0 39.0 13 36.97606099587582 39.0 37.0 39.0 33.0 39.0 14 38.07311996554903 40.0 37.0 41.0 33.0 41.0 15 38.157419931871004 40.0 37.0 41.0 33.0 41.0 16 38.14026070105506 40.0 37.0 41.0 33.0 41.0 17 38.04896012190341 40.0 37.0 41.0 33.0 41.0 18 37.91372904094917 40.0 37.0 41.0 33.0 41.0 19 37.7520689902665 40.0 37.0 41.0 33.0 41.0 20 37.7788623452053 40.0 36.0 41.0 33.0 41.0 21 37.741507340153596 40.0 36.0 41.0 33.0 41.0 22 37.78287058251945 39.0 36.0 41.0 33.0 41.0 23 37.73206092962396 39.0 36.0 41.0 33.0 41.0 24 37.64903079055028 39.0 36.0 41.0 33.0 41.0 25 37.55064678374842 39.0 35.0 41.0 33.0 41.0 26 37.430002153185335 39.0 35.0 41.0 33.0 41.0 27 37.33193284270153 39.0 35.0 41.0 33.0 41.0 28 37.32462305454184 39.0 35.0 41.0 33.0 41.0 29 37.25515798307265 39.0 35.0 41.0 32.0 41.0 30 37.13669966377183 39.0 35.0 41.0 32.0 41.0 31 36.98976408818122 39.0 35.0 41.0 31.0 41.0 32 36.83292938104203 39.0 35.0 41.0 31.0 41.0 33 36.65008529926516 39.0 35.0 41.0 30.0 41.0 34 36.39391697538191 39.0 35.0 41.0 30.0 41.0 35 36.249846792582 39.0 35.0 40.0 30.0 41.0 36 36.03754823963296 39.0 35.0 40.0 29.0 41.0 37 35.93881641058484 39.0 35.0 40.0 29.0 41.0 38 35.752748071794926 39.0 35.0 40.0 27.0 41.0 39 35.6412793233477 39.0 35.0 40.0 27.0 41.0 40 35.380633478167255 38.0 35.0 40.0 25.0 41.0 41 35.315309147725074 38.0 34.0 40.0 25.0 41.0 42 35.27104738664031 38.0 34.0 40.0 25.0 41.0 43 35.323656881635536 38.0 34.0 40.0 25.0 41.0 44 35.123366477664845 38.0 34.0 40.0 24.0 41.0 45 35.00272184710176 38.0 34.0 40.0 24.0 41.0 46 34.870085630524436 38.0 34.0 40.0 23.0 41.0 47 34.64658499285032 38.0 34.0 40.0 23.0 41.0 48 34.58402667741419 38.0 33.0 40.0 23.0 41.0 49 34.43496552142972 38.0 33.0 40.0 23.0 41.0 50 34.18895029454471 37.0 33.0 40.0 22.0 41.0 51 31.95039392249637 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 9.0 10 15.0 11 10.0 12 7.0 13 3.0 14 5.0 15 12.0 16 23.0 17 41.0 18 72.0 19 140.0 20 249.0 21 395.0 22 597.0 23 890.0 24 1363.0 25 1973.0 26 2499.0 27 2803.0 28 3072.0 29 3479.0 30 4156.0 31 4976.0 32 6511.0 33 8403.0 34 12546.0 35 15262.0 36 17414.0 37 26440.0 38 32996.0 39 34753.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.870472099686964 19.76403297134055 23.220723580692002 14.144771348280488 2 32.65112324501593 25.01449259359455 24.97971036896763 17.35467379242189 3 29.94749540377746 25.791847709066012 28.327637514009506 15.933019373147017 4 26.88169074737615 24.359151313719103 30.85404163929177 17.905116299612978 5 25.14257951603019 28.60810370623927 27.203564349876054 19.045752427854488 6 23.49842927890375 34.98098019621592 27.571814251878518 13.948776273001817 7 59.096103838742984 27.02799693033065 9.760554748877858 4.115344482048507 8 79.06220497220183 5.783787066533427 10.72893605039558 4.4250719108691685 9 73.76260855642725 6.887984673737211 12.120225035472348 7.2291817343631815 10 38.28253104175523 29.792907738768932 18.893373158060367 13.031188061415472 11 27.89037526155681 25.68584473877445 28.56448790075472 17.859292098914022 12 26.472033435103548 22.04751362303798 32.31047828319356 19.169974658664916 13 23.449292485383182 23.666267315198727 34.3344724971981 18.549967702219988 14 20.11130311880614 26.67244530081103 32.32648914849802 20.889762431884808 15 18.192759776289567 26.344498611471508 36.48820993004908 18.974531682189845 16 22.756960585666413 25.958581547753784 31.00145201985347 20.28300584672633 17 22.85854676552916 24.63299232030564 30.59731569561689 21.911145218548313 18 22.847504789457123 25.523527690515497 31.575634775599443 20.053332744427944 19 22.760825277291623 27.20301225107245 29.22148547704097 20.81467699459495 20 22.696229717270203 27.749590066638323 30.25391023977651 19.30026997631496 21 23.337216428252 26.548775168804212 31.63967823681726 18.474330166126528 22 21.928812380263572 23.59615076714129 31.297929077387685 23.17710777520745 23 20.82295847664898 26.167274895515302 31.63912613801366 21.37064048982206 24 21.734473601395706 25.41642052261673 30.789446079270345 22.05965979671722 25 20.98582762371154 28.171393552590175 29.333561534172155 21.509217289526134 26 20.29515202040557 27.335515963936906 29.08677336896211 23.28255864669541 27 20.45802116746813 27.5955545004334 29.58642278622182 22.36000154587665 28 18.975083780993447 25.67811535552402 31.264251050367974 24.082549813114554 29 21.138758992309263 26.803292717264682 29.05309534194239 23.004852948483663 30 21.640616804783384 26.09494995224345 30.031414421924946 22.233018821048216 31 22.15517288974035 25.822765242067717 28.476152092178413 23.545909776013517 32 23.245015928050485 27.15718805037349 26.854637905999656 22.743158115576364 33 22.78014873541769 25.358450148238525 27.67560882695567 24.185792289388107 34 20.45802116746813 26.479210719550373 30.363225802889687 22.699542310091815 35 20.25429670893903 27.84786365367946 28.08581823803188 23.81202139934963 36 21.717358538484046 28.922247925488747 27.285827071612733 22.07456646441447 37 19.7491263036433 27.58175203034335 29.044261761084766 23.624859904928584 38 21.49320642422168 27.30239003572079 27.50059350621387 23.703810033843656 39 21.930468676674376 26.260027494520422 28.66110519138505 23.148398637420154 40 22.94080948726584 26.205369712963833 29.76364650217803 21.0901742975923 41 19.794950504342257 27.49672881458866 28.88856989846903 23.819750782600053 42 19.788877417502636 27.318400901025246 30.169991221629022 22.722730459843092 43 20.649047353514387 26.456022569799092 28.913414344631118 23.98151573205541 44 21.209979737973907 25.611863499091797 28.341439984099555 24.83671677883474 45 20.290183131173155 25.40537854654469 28.329293810420314 25.975144511861842 46 22.446128959238546 26.67244530081103 27.5972107968442 23.284214943106218 47 18.94416624799174 26.16451440149729 31.313939942692144 23.577379407818825 48 20.55132586527685 26.474793929121553 29.138670656500686 23.83520954910091 49 20.49335549089865 25.00841950675493 30.53658482722068 23.96164017512574 50 20.22227497833012 25.198341495193983 30.165022332396607 24.41436119407929 51 19.656925803441784 25.716762271776155 28.303345166651024 26.322966758131034 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 60.0 1 194.5 2 329.0 3 1462.0 4 2595.0 5 1792.0 6 989.0 7 851.0 8 713.0 9 703.0 10 693.0 11 708.5 12 724.0 13 704.0 14 684.0 15 663.0 16 642.0 17 604.0 18 566.0 19 577.5 20 589.0 21 693.5 22 798.0 23 853.5 24 909.0 25 1089.0 26 1617.5 27 1966.0 28 2344.5 29 2723.0 30 3121.5 31 3520.0 32 3994.5 33 4469.0 34 5063.5 35 5658.0 36 6090.0 37 6522.0 38 7156.5 39 7791.0 40 8434.0 41 9077.0 42 9789.5 43 10502.0 44 11497.5 45 12493.0 46 15359.5 47 18226.0 48 17254.0 49 16282.0 50 15395.5 51 14509.0 52 12963.5 53 11418.0 54 10206.0 55 8994.0 56 8431.0 57 7868.0 58 7381.5 59 6895.0 60 6197.5 61 5500.0 62 4918.0 63 4336.0 64 4001.0 65 3666.0 66 3107.0 67 2548.0 68 2138.0 69 1728.0 70 1382.0 71 1036.0 72 887.5 73 739.0 74 604.0 75 377.5 76 286.0 77 227.0 78 168.0 79 127.0 80 86.0 81 68.0 82 50.0 83 36.5 84 23.0 85 17.0 86 11.0 87 8.0 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 181127.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.766291055447276 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8558603804382 38.970998249846794 2 10.17222257099211 10.735009137235199 3 5.0683240211773075 8.023099813942704 4 3.118002804109904 6.58101773893456 5 2.165861008223994 5.714222617279589 6 1.467972461129596 4.647567728720732 7 1.1090882457572144 4.096573122726043 8 0.8464645196392324 3.573183456911449 9 0.6079059158348504 2.8869246440342966 >10 1.549584615062674 10.504783936133212 >50 0.020926193316173857 0.709446962628432 >100 0.013602025655513005 1.2968800896608457 >500 0.0031389289974260784 1.4658223235630248 >1k 0.0010463096658086927 0.7944701783831234 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1439 0.7944701783831234 No Hit GAATCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC 968 0.5344316418866321 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCG 883 0.48750324358047115 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGC 804 0.4438874380959216 No Hit GCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 318 0.17556741954540184 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 229 0.1264306260248334 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCG 228 0.1258785272212315 No Hit GAATCTATCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC 208 0.11483655114919367 No Hit GAATGACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCT 203 0.1120760571311842 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14023309611488072 0.0 2 0.0 0.0 0.0 0.6349136241421764 0.0 3 0.0 0.0 0.0 0.8336691934388578 0.0 4 0.0 0.0 0.0 1.1654805744035952 0.0 5 0.0 0.0 0.0 2.450766589188801 0.0 6 0.0 0.0 0.0 3.0304703329707885 0.0 7 0.0 0.0 0.0 3.6162471635923965 0.0 8 0.0 0.0 0.0 4.657505507185566 0.0 9 0.0 0.0 0.0 5.093663562031061 0.0 10 0.0 0.0 0.0 6.585434529363375 0.0 11 0.0 0.0 0.0 7.551607435666687 0.0 12 0.0 0.0 0.0 8.936823333903835 0.0 13 0.0 0.0 0.0 9.357522622248478 0.0 14 0.0 0.0 0.0 9.551309302312742 0.0 15 0.0 0.0 0.0 9.853307347882977 0.0 16 0.0 0.0 0.0 10.362342444803922 0.0 17 0.0 0.0 0.0 10.926035323281454 0.0 18 0.0 0.0 0.0 11.605668950515383 0.0 19 0.0 0.0 0.0 12.011461571162775 0.0 20 0.0 0.0 0.0 12.469151479348744 0.0 21 0.0 0.0 0.0 12.94671694446438 0.0 22 0.0 0.0 0.0 13.512066119352719 0.0 23 0.0 0.0 0.0 14.043737267221342 0.0 24 0.0 0.0 0.0 14.482655816084847 0.0 25 0.0 0.0 0.0 14.884031646303422 0.0 26 0.0 0.0 0.0 15.271605006431951 0.0 27 0.0 0.0 0.0 15.71162775290266 0.0 28 0.0 0.0 0.0 16.104722101067207 0.0 29 0.0 0.0 0.0 16.53149447625147 0.0 30 0.0 0.0 0.0 17.059300932494878 0.0 31 5.520988036018926E-4 0.0 0.0 17.49656318494758 0.0 32 5.520988036018926E-4 0.0 0.0 17.942659018257906 0.0 33 5.520988036018926E-4 0.0 0.0 18.367775097031366 0.0 34 5.520988036018926E-4 0.0 0.0 18.798964262644443 0.0 35 5.520988036018926E-4 0.0 0.0 19.254445775616006 0.0 36 5.520988036018926E-4 0.0 0.0 19.649748518994958 0.0 37 5.520988036018926E-4 0.0 0.0 20.105782130770123 0.0 38 5.520988036018926E-4 0.0 0.0 20.58886858392178 0.0 39 5.520988036018926E-4 0.0 0.0 21.22157381284955 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAG 20 7.0175383E-4 45.0 6 CTCACGA 20 7.0175383E-4 45.0 24 TTGGCAA 20 7.0175383E-4 45.0 1 TAGACGG 40 6.7611836E-9 45.0 2 TACGGTT 20 7.0175383E-4 45.0 33 ATATGAG 20 7.0175383E-4 45.0 1 ATCAACC 20 7.0175383E-4 45.0 10 CGTTAAG 20 7.0175383E-4 45.0 2 AATGCGG 20 7.0175383E-4 45.0 2 TCTCGTG 20 7.0175383E-4 45.0 43 TCGTACG 20 7.0175383E-4 45.0 30 CGTCACG 20 7.0175383E-4 45.0 36 GTACGGT 20 7.0175383E-4 45.0 32 ACGGTTA 20 7.0175383E-4 45.0 34 CGTTTTA 90 0.0 42.5 1 CGTTTTT 545 0.0 42.11009 1 GACGGGA 65 0.0 41.538464 4 CTCGTCC 60 3.6379788E-12 41.249996 37 AAGGGCG 45 1.9128493E-8 40.0 5 AGGCGAT 40 3.4367622E-7 39.375 7 >>END_MODULE