##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936340.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 86388 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.973086539797194 33.0 31.0 34.0 30.0 34.0 2 32.07227855720702 33.0 31.0 34.0 30.0 34.0 3 31.96524980321341 33.0 31.0 34.0 30.0 34.0 4 35.73107376024448 37.0 35.0 37.0 35.0 37.0 5 35.81440709357781 37.0 35.0 37.0 35.0 37.0 6 35.780177802472565 37.0 35.0 37.0 35.0 37.0 7 26.59309163309719 35.0 10.0 37.0 0.0 37.0 8 30.98393295365097 35.0 19.0 37.0 17.0 37.0 9 35.80989257767283 38.0 32.0 39.0 32.0 39.0 10 36.69792100754734 38.0 35.0 39.0 33.0 39.0 11 37.05707968699356 39.0 37.0 39.0 34.0 39.0 12 37.06005463721813 39.0 37.0 39.0 34.0 39.0 13 36.93500254665 39.0 37.0 39.0 33.0 39.0 14 38.137646432374865 40.0 37.0 41.0 33.0 41.0 15 38.201879890725564 40.0 37.0 41.0 33.0 41.0 16 38.16521970644071 40.0 37.0 41.0 33.0 41.0 17 38.05571375654026 40.0 37.0 41.0 33.0 41.0 18 37.953002731860906 40.0 37.0 41.0 33.0 41.0 19 37.83671343242117 40.0 36.0 41.0 33.0 41.0 20 37.921817845071075 40.0 36.0 41.0 33.0 41.0 21 37.89652498032134 40.0 36.0 41.0 33.0 41.0 22 37.93716719914803 40.0 36.0 41.0 33.0 41.0 23 37.91952586007316 40.0 36.0 41.0 33.0 41.0 24 37.86246932444321 40.0 36.0 41.0 33.0 41.0 25 37.76317312589712 40.0 36.0 41.0 33.0 41.0 26 37.55174329768023 39.0 36.0 41.0 33.0 41.0 27 37.46612955503079 39.0 36.0 41.0 33.0 41.0 28 37.42882113256471 39.0 36.0 41.0 33.0 41.0 29 37.379902301245544 39.0 36.0 41.0 33.0 41.0 30 37.373142103069874 39.0 36.0 41.0 33.0 41.0 31 37.19530490345881 39.0 35.0 41.0 32.0 41.0 32 37.071711348798445 39.0 35.0 41.0 32.0 41.0 33 36.99143399546233 39.0 35.0 41.0 31.0 41.0 34 36.76922720748252 39.0 35.0 41.0 31.0 41.0 35 36.708281242765196 39.0 35.0 41.0 31.0 41.0 36 36.47740426911145 39.0 35.0 41.0 30.0 41.0 37 36.318296522665186 39.0 35.0 41.0 30.0 41.0 38 36.22099134139001 39.0 35.0 40.0 30.0 41.0 39 36.21235588276149 39.0 35.0 40.0 30.0 41.0 40 35.89618928554892 38.0 35.0 40.0 29.0 41.0 41 35.834502477195905 38.0 35.0 40.0 28.0 41.0 42 35.70965874890031 38.0 35.0 40.0 28.0 41.0 43 35.666666666666664 38.0 35.0 40.0 28.0 41.0 44 35.40534564985877 38.0 34.0 40.0 26.0 41.0 45 35.30587581608557 38.0 34.0 40.0 26.0 41.0 46 35.15561189054035 38.0 34.0 40.0 26.0 41.0 47 34.94147335278048 38.0 34.0 40.0 24.0 41.0 48 34.816409686530534 38.0 34.0 40.0 24.0 41.0 49 34.656341158494236 38.0 34.0 40.0 24.0 41.0 50 34.43741028846599 37.0 33.0 40.0 23.0 41.0 51 32.038303931101545 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 4.0 11 2.0 12 0.0 13 9.0 14 7.0 15 5.0 16 4.0 17 17.0 18 36.0 19 55.0 20 106.0 21 142.0 22 249.0 23 325.0 24 520.0 25 715.0 26 855.0 27 1100.0 28 1378.0 29 1558.0 30 1861.0 31 2326.0 32 2957.0 33 4050.0 34 6298.0 35 7719.0 36 8282.0 37 12816.0 38 16118.0 39 16867.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.582719822197525 19.79673102745752 22.094503866277723 12.52604528406723 2 30.896652312821228 27.822151224707138 24.307774227902023 16.973422234569615 3 32.11209890262536 27.297772838820205 25.090290318099733 15.499837940454691 4 28.51784970134741 25.068296522665186 27.721442792980504 18.692410983006898 5 27.00953836180951 29.182293837107004 23.630596842154002 20.17757095892948 6 24.938648886419408 36.39047089873594 24.599481409455016 14.071398805389638 7 57.20354678890587 28.903319905542435 9.169097559846275 4.724035745705422 8 75.88669722646664 8.745427605685975 9.940037968236329 5.427837199611057 9 68.86604621012178 9.92267444552484 11.660184284854378 9.551095059499005 10 41.06125850812613 26.63101356669908 18.796592119275825 13.511135805898967 11 33.65397971940548 24.83562531833125 23.791498819280456 17.71889614298282 12 33.05204426540723 21.203176367088023 27.62536463397694 18.119414733527805 13 24.35870722785572 26.293003657915452 29.344353382414223 20.003935731814604 14 18.65305366486086 30.815622540167613 26.546511089503174 23.984812705468354 15 18.406491642357732 26.8335879983331 36.12191508079826 18.638005278510906 16 21.013335185442422 25.701486317544102 31.67222299393434 21.61295550307913 17 20.982080844561747 24.689771727554753 29.073482428115017 25.25466499976849 18 21.081631708107608 27.881187201926195 28.86627772375793 22.170903366208268 19 24.667777932120202 28.25855442885586 25.59846274945594 21.475204889567994 20 26.737509839329537 26.2744825670232 28.7655692920313 18.222438301615966 21 24.394591841459462 28.669491133027737 26.650692225772097 20.285224799740707 22 21.98916516182803 26.260591748854008 26.717831180256518 25.03241190906144 23 23.029818956336527 28.418298837801547 27.406584247812194 21.14529795804973 24 24.61800250034727 24.13645413714868 28.376626383293974 22.868916979210073 25 21.37102375329907 29.226281427976108 26.275640135203965 23.12705468352086 26 20.87442700375052 29.726350882066953 26.75255822567949 22.64666388850303 27 23.53104597860814 29.464740473213872 26.046441635412325 20.95777191276566 28 19.59184145946196 28.845441496504144 30.316710654257534 21.24600638977636 29 22.37926563874612 29.314256609714313 27.479511043200443 20.82696670833912 30 24.056581932675837 27.403111543269898 27.801314997453353 20.738991526600916 31 23.644487660323193 27.193591702551277 27.8198360883456 21.342084548779923 32 26.411075612353567 29.47863129138306 26.42149372598046 17.688799370282908 33 26.090429226281426 28.010834838171967 24.962957818215493 20.93577811733111 34 23.00666759272121 27.93559290642219 29.432328564152428 19.62541093670417 35 26.123998703523636 24.65157197758948 26.055702180858454 23.16872713802843 36 25.494281613187013 28.222669815252114 26.8301152937908 19.45293327777006 37 24.40964022780942 27.066259202667037 30.000694540908455 18.523406028615085 38 24.21401120525999 26.657637634856695 27.162337361670602 21.966013798212714 39 25.056720840857526 24.587905727647357 30.38616474510349 19.969208686391628 40 27.12413761170533 23.867898319211 29.3385655415104 19.66939852757327 41 21.043431958142335 27.239894429781913 28.950780200953837 22.765893411121915 42 23.587766819465667 26.081168680835304 28.71232115571607 21.61874334398296 43 26.584710839468446 24.95022456822707 26.85558179376765 21.609482798536835 44 22.999722183636617 26.539565680418576 28.137009769875444 22.323702366069362 45 23.01592813816734 25.480390795017826 26.401815066907442 25.101865999907396 46 24.197805250729267 28.362735565124787 25.629717090336623 21.809742093809326 47 22.927952956429134 25.280131499745334 31.030930221790065 20.76098532203547 48 22.924480251886838 24.811316386535168 28.719266564800666 23.54493679677733 49 21.210121776172617 24.934018613696345 31.115432698985966 22.740426911145068 50 20.690373663008753 25.845024771959068 29.732138722970785 23.7324628420614 51 21.447423253229616 24.864564522850397 27.253785247951107 26.434226975968883 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 61.0 1 151.0 2 241.0 3 388.5 4 536.0 5 381.5 6 227.0 7 191.5 8 156.0 9 165.5 10 175.0 11 190.0 12 205.0 13 205.0 14 205.0 15 213.0 16 221.0 17 225.5 18 230.0 19 239.5 20 249.0 21 331.5 22 414.0 23 417.0 24 420.0 25 544.0 26 839.5 27 1011.0 28 1220.0 29 1429.0 30 1634.5 31 1840.0 32 2064.5 33 2289.0 34 2399.0 35 2509.0 36 2644.5 37 2780.0 38 3007.0 39 3234.0 40 3785.5 41 4337.0 42 4669.5 43 5002.0 44 5462.0 45 5922.0 46 7341.5 47 8761.0 48 7963.0 49 7165.0 50 6962.0 51 6759.0 52 5852.5 53 4946.0 54 4619.0 55 4292.0 56 4159.5 57 4027.0 58 4000.0 59 3973.0 60 3960.5 61 3948.0 62 3519.0 63 3090.0 64 2502.0 65 1914.0 66 1527.0 67 1140.0 68 993.5 69 847.0 70 636.0 71 425.0 72 365.5 73 306.0 74 237.0 75 138.0 76 108.0 77 95.5 78 83.0 79 60.5 80 38.0 81 26.0 82 14.0 83 13.0 84 12.0 85 9.0 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 86388.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.23253229615224 #Duplication Level Percentage of deduplicated Percentage of total 1 70.55324351649385 34.735148400240774 2 10.789776868636993 10.624160763068945 3 5.645294020831864 8.337963606056396 4 3.719639792151607 7.325091447886281 5 2.649831887329242 6.522896698615549 6 1.9280054548447014 5.695235449367968 7 1.349603818391291 4.651108950317174 8 0.9969198937245775 3.9264712691577532 9 0.6818555876889798 3.0212529517988607 >10 1.6270485057957726 10.611427513080521 >50 0.03056594013778185 1.0927443626429596 >100 0.02351226164444758 2.0465805435940174 >500 0.0047024523288895165 1.4099180441728019 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCG 630 0.7292679538824837 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGC 588 0.6806500902903181 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTC 483 0.5591054313099041 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 224 0.2592952724915497 No Hit GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 203 0.23498634069546698 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGC 142 0.1643746816687503 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCG 139 0.16090197712645274 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 129 0.1493262953187943 No Hit CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 128 0.14816872713802842 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 109 0.12617493170347735 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 109 0.12617493170347735 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCT 102 0.11807195443811641 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 92 0.10649627263045794 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15164143168032598 0.0 2 0.0 0.0 0.0 0.9630967263971848 0.0 3 0.0 0.0 0.0 1.2015557716349492 0.0 4 0.0 0.0 0.0 1.5928138167338057 0.0 5 0.0 0.0 0.0 3.165948974394592 0.0 6 0.0 0.0 0.0 3.596564337639487 0.0 7 0.0 0.0 0.0 4.226281427976108 0.0 8 0.0 0.0 0.0 5.101402972635088 0.0 9 0.0 0.0 0.0 5.43825531323795 0.0 10 0.0 0.0 0.0 7.154928925313701 0.0 11 0.0 0.0 0.0 8.123813492614715 0.0 12 0.0 0.0 0.0 9.905310922813353 0.0 13 0.0 0.0 0.0 10.279205445200722 0.0 14 0.0 0.0 0.0 10.478307172292448 0.0 15 0.0 0.0 0.0 10.863777376487475 0.0 16 0.0 0.0 0.0 11.48423392137797 0.0 17 0.0 0.0 0.0 12.096587489003102 0.0 18 0.0 0.0 0.0 12.70778348844747 0.0 19 0.0 0.0 0.0 13.11177478353475 0.0 20 0.0 0.0 0.0 13.50766310135667 0.0 21 0.0 0.0 0.0 13.963744964578414 0.0 22 0.0 0.0 0.0 14.454553873223134 0.0 23 0.0 0.0 0.0 14.932629531879428 0.0 24 0.0 0.0 0.0 15.29726350882067 0.0 25 0.0 0.0 0.0 15.648006667592721 0.0 26 0.0 0.0 0.0 16.0045376672686 0.0 27 0.0 0.0 0.0 16.302032689725426 0.0 28 0.0 0.0 0.0 16.58216418947076 0.0 29 0.0 0.0 0.0 16.89123489373524 0.0 30 0.0 0.0 0.0 17.29291105246099 0.0 31 0.0 0.0 0.0 17.676066120294486 0.0 32 0.0 0.0 0.0 18.060378756308747 0.0 33 0.0 0.0 0.0 18.412279483261564 0.0 34 0.0 0.0 0.0 18.72019261934528 0.0 35 0.0 0.0 0.0 19.074408482659628 0.0 36 0.0 0.0 0.0 19.473769505023846 0.0 37 0.0 0.0 0.0 19.88586377737649 0.0 38 0.0 0.0 0.0 20.2447099134139 0.0 39 0.0 0.0 0.0 20.590822799462888 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATTC 30 2.1421783E-6 45.000004 43 GAATCTA 25 3.8608086E-5 45.000004 1 TATGCTT 30 2.1421783E-6 45.000004 37 ACGGGAG 25 3.8608086E-5 45.000004 5 TGATTCA 30 2.1421783E-6 45.000004 44 TACGAAT 30 2.1421783E-6 45.000004 12 CGGGATA 25 3.8608086E-5 45.000004 6 CGAATAT 30 2.1421783E-6 45.000004 14 ATGAAAC 25 3.8608086E-5 45.000004 3 GCTACGA 25 3.8608086E-5 45.000004 10 AGCTACG 25 3.8608086E-5 45.000004 9 AGGGCGA 30 2.1421783E-6 45.000004 6 AAGGAAC 25 3.8608086E-5 45.000004 6 TGACTAT 30 2.1421783E-6 45.000004 23 ACACGGG 20 6.997062E-4 45.0 3 TCCGCCC 20 6.997062E-4 45.0 35 CACGGGA 20 6.997062E-4 45.0 4 GGCCGAT 20 6.997062E-4 45.0 8 TTTCCGC 20 6.997062E-4 45.0 33 TAACGGG 20 6.997062E-4 45.0 3 >>END_MODULE