##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936338.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 136260 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.900733891090564 33.0 31.0 34.0 30.0 34.0 2 32.02984001174226 33.0 31.0 34.0 30.0 34.0 3 31.56443563775136 33.0 31.0 34.0 28.0 34.0 4 35.481704095112285 37.0 35.0 37.0 33.0 37.0 5 35.71467782181124 37.0 35.0 37.0 35.0 37.0 6 35.74524438573316 37.0 35.0 37.0 35.0 37.0 7 27.001218259210333 35.0 16.0 37.0 0.0 37.0 8 31.27172317628064 36.0 23.0 37.0 17.0 37.0 9 36.05581241743725 39.0 32.0 39.0 32.0 39.0 10 36.748745046235136 38.0 35.0 39.0 33.0 39.0 11 37.00743431674739 39.0 37.0 39.0 34.0 39.0 12 37.187098194627914 39.0 37.0 39.0 34.0 39.0 13 37.233083810362544 39.0 37.0 39.0 34.0 39.0 14 38.51282107735212 40.0 38.0 41.0 34.0 41.0 15 38.56196976368707 40.0 38.0 41.0 34.0 41.0 16 38.49178775869661 40.0 38.0 41.0 34.0 41.0 17 38.384683692939966 40.0 38.0 41.0 34.0 41.0 18 38.2228533685601 40.0 37.0 41.0 34.0 41.0 19 38.03986496403934 40.0 37.0 41.0 34.0 41.0 20 38.011478056656394 40.0 36.0 41.0 34.0 41.0 21 37.98483047115808 40.0 36.0 41.0 33.0 41.0 22 37.99671950682519 40.0 36.0 41.0 34.0 41.0 23 37.94147952443857 40.0 36.0 41.0 34.0 41.0 24 37.874445912226626 40.0 36.0 41.0 33.0 41.0 25 37.77140026420079 40.0 36.0 41.0 33.0 41.0 26 37.700051372376336 40.0 36.0 41.0 33.0 41.0 27 37.59431234404814 39.0 36.0 41.0 33.0 41.0 28 37.52197269925143 40.0 36.0 41.0 33.0 41.0 29 37.481256421547045 40.0 36.0 41.0 33.0 41.0 30 37.37261852341113 40.0 36.0 41.0 33.0 41.0 31 37.246183766329075 39.0 35.0 41.0 32.0 41.0 32 37.0618816967562 39.0 35.0 41.0 32.0 41.0 33 36.83628357551739 39.0 35.0 41.0 31.0 41.0 34 36.61086158814032 39.0 35.0 41.0 30.0 41.0 35 36.398899163364156 39.0 35.0 41.0 30.0 41.0 36 36.14351974167034 39.0 35.0 41.0 29.0 41.0 37 36.050983414061356 39.0 35.0 41.0 28.0 41.0 38 35.89140613532952 39.0 35.0 41.0 27.0 41.0 39 35.77768971084691 39.0 35.0 41.0 26.0 41.0 40 35.56978570380156 39.0 35.0 41.0 25.0 41.0 41 35.46339351240276 39.0 35.0 41.0 24.0 41.0 42 35.39929546455306 39.0 35.0 40.0 24.0 41.0 43 35.29014384265375 39.0 35.0 40.0 23.0 41.0 44 35.10851313665052 39.0 35.0 40.0 23.0 41.0 45 34.995435197416704 38.0 34.0 40.0 23.0 41.0 46 34.77796125055042 38.0 34.0 40.0 22.0 41.0 47 34.60144576544841 38.0 34.0 40.0 21.0 41.0 48 34.53103625421987 38.0 34.0 40.0 20.0 41.0 49 34.38088947600176 38.0 34.0 40.0 20.0 41.0 50 34.20934977249376 38.0 33.0 40.0 19.0 41.0 51 32.1471304858359 36.0 30.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 11.0 10 8.0 11 6.0 12 1.0 13 1.0 14 2.0 15 6.0 16 12.0 17 24.0 18 43.0 19 87.0 20 153.0 21 290.0 22 515.0 23 749.0 24 1120.0 25 1710.0 26 2147.0 27 2381.0 28 2440.0 29 2474.0 30 2781.0 31 3300.0 32 4133.0 33 5412.0 34 7957.0 35 10556.0 36 12065.0 37 19694.0 38 25678.0 39 30495.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.114633788345806 21.14853955672978 24.452517246440628 16.28430940848378 2 34.020989285190076 24.9398209305739 25.435931307793926 15.603258476442097 3 29.291795097607515 24.470864523704684 30.935711140466754 15.301629238221048 4 25.220167327168646 24.66020842506972 32.61191839131073 17.507705856450904 5 24.272713929252898 28.51460443270219 29.511228533685603 17.701453104359313 6 23.860267136356963 33.4155291354763 29.179509760751504 13.544693967415236 7 60.04036400998092 26.343020695728754 10.369881109643329 3.246734184646998 8 82.02333773667988 4.189050344928813 10.997357992073976 2.7902539263173343 9 76.35109349772495 6.729781300455012 12.104799647732277 4.814325554087773 10 35.366211654190515 35.89167767503302 18.300308234258036 10.44180243651842 11 21.532364597093792 26.14120064582416 35.33465433729634 16.991780419785705 12 22.818141787758698 22.82988404520769 36.26302656685748 18.088947600176134 13 20.78379568472039 25.266402465874066 36.525025686188165 17.424776163217377 14 18.07060032291208 28.51533832379275 33.18875678849258 20.22530456480258 15 16.539703507999413 28.601937472479083 36.834727726405404 18.0236312931161 16 20.46602084250697 28.769998532217816 33.18728900631147 17.576691618963746 17 21.02451196242478 26.94994862762366 32.32643475708205 19.699104652869515 18 20.58784676354029 26.761338617349185 33.72669895787465 18.92411566123587 19 20.22530456480258 29.27711727579627 31.585204755614267 18.912373403786876 20 21.05239982386614 28.47130485835902 32.691178629091446 17.7851166886834 21 21.238808160868928 28.387641274034937 33.93659180977543 16.43695875532071 22 20.93057390283282 25.410245119624246 32.76970497578159 20.889476001761338 23 18.61001027447527 27.588433876412736 33.91163951269632 19.889916336415673 24 18.97695581975635 26.574930280346397 34.60076324673418 19.84735065316307 25 18.246000293556435 30.243651842066637 32.11947746954352 19.390870394833406 26 18.91677675033025 29.67708792015265 31.238808160868924 20.16732716864817 27 18.925583443416997 29.15529135476295 31.868486716571258 20.05063848524879 28 17.713195361808307 28.49919271980038 34.09951563188023 19.68809628651108 29 18.37589901658594 27.5407309555262 33.78687802730075 20.29649200058711 30 19.26317334507559 28.915308968149127 32.88492587699985 18.93659180977543 31 21.410538676060472 28.687068838984292 31.119917804197854 18.782474680757375 32 20.62821077352121 29.815793336268896 31.075150447673565 18.480845442536328 33 19.90826361367973 28.710553353882283 31.282107735212094 20.09907529722589 34 20.47776309995597 27.963452223690005 31.704095112285337 19.854689564068693 35 20.113019227946573 28.67752825480699 30.943050051372378 20.266402465874066 36 20.818288565976808 28.676794363716425 30.079260237780716 20.425656832526055 37 20.2443857331572 29.810656098634965 31.241009834140616 18.703948334067224 38 20.10127697049758 29.15529135476295 30.76838397181858 19.975047702920886 39 20.569499486276236 28.891824453251136 30.643622486423016 19.895053574049612 40 22.61558784676354 27.42844561867019 30.531337149567005 19.424629384999268 41 20.234111257889328 27.803463965947454 30.710406575664173 21.252018200499045 42 20.899750477029208 27.822545134302068 30.1027447526787 21.174959635990017 43 20.57463672391017 28.153530016145606 29.505357404961103 21.76647585498312 44 20.129898723029502 28.67459269044474 29.45545281080288 21.740055775722883 45 19.851753999706442 28.317187729340965 29.763687068838983 22.067371202113605 46 21.26229267576692 29.004843681197713 28.82797592837223 20.904887714663147 47 19.299134008513136 27.756494936151476 31.98077205342727 20.96359900190812 48 20.213562307353587 27.322031410538678 31.133127843827975 21.33127843827976 49 19.77249376192573 26.748128577719065 31.798767062967855 21.680610597387346 50 19.275649493615145 26.83105827095259 32.17011595479231 21.72317628063995 51 20.04403346543373 26.79656538969617 30.269338030236316 22.890063114633787 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 47.0 1 123.0 2 199.0 3 1549.0 4 2899.0 5 2033.5 6 1168.0 7 1020.5 8 873.0 9 838.5 10 804.0 11 797.5 12 791.0 13 794.5 14 798.0 15 766.5 16 735.0 17 726.5 18 718.0 19 728.0 20 738.0 21 782.5 22 827.0 23 936.5 24 1046.0 25 1224.5 26 1669.0 27 1935.0 28 2242.0 29 2549.0 30 2958.0 31 3367.0 32 3876.5 33 4386.0 34 4991.0 35 5596.0 36 6024.0 37 6452.0 38 6876.0 39 7300.0 40 7974.0 41 8648.0 42 9285.0 43 9922.0 44 10361.5 45 10801.0 46 12054.5 47 13308.0 48 12452.0 49 11596.0 50 10763.0 51 9930.0 52 8692.5 53 7455.0 54 6356.5 55 5258.0 56 4632.0 57 4006.0 58 3550.0 59 3094.0 60 2781.5 61 2469.0 62 2229.5 63 1990.0 64 1615.0 65 1240.0 66 1029.0 67 818.0 68 640.5 69 463.0 70 369.0 71 275.0 72 214.5 73 154.0 74 116.0 75 63.5 76 49.0 77 37.5 78 26.0 79 21.5 80 17.0 81 15.0 82 13.0 83 8.0 84 3.0 85 5.0 86 7.0 87 5.5 88 4.0 89 2.5 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 136260.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.04902392484955 #Duplication Level Percentage of deduplicated Percentage of total 1 74.32816620569885 42.40349332159107 2 10.802084003344696 12.324966974900924 3 5.363092558049785 9.178775869660942 4 3.2340644497330673 7.380008806693087 5 2.0093908792693123 5.7316894172904735 6 1.3893355631311508 4.7556142668428 7 0.9532385669260951 3.806693086745927 8 0.634205956133016 2.8944664611771613 9 0.38335370167878047 1.9682959048877144 >10 0.8799125233163955 6.49787171583737 >50 0.009004952723998198 0.35006605019815057 >100 0.012864218177140285 1.5404373990899751 >500 0.0 0.0 >1k 0.0012864218177140283 1.1676207250843975 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1591 1.1676207250843975 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGC 381 0.27961250550418315 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTC 362 0.2656685747835021 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCG 359 0.2634669015118156 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 280 0.20548950535740496 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 153 0.11228533685601057 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10494642595038896 0.0 2 0.0 0.0 0.0 0.4652869514164098 0.0 3 0.0 0.0 0.0 0.6715103478643769 0.0 4 0.0 0.0 0.0 0.996624100983414 0.0 5 0.0 0.0 0.0 1.964626449434904 0.0 6 0.0 0.0 0.0 2.5627476882430646 0.0 7 0.0 0.0 0.0 3.004550124761485 0.0 8 0.0 0.0 0.0 3.7450462351387053 0.0 9 0.0 0.0 0.0 4.0415382357258185 0.0 10 0.0 0.0 0.0 5.085865257595772 0.0 11 0.0 0.0 0.0 5.889476001761339 0.0 12 0.0 0.0 0.0 6.850873330397769 0.0 13 0.0 0.0 0.0 7.235432261852341 0.0 14 0.0 0.0 0.0 7.41156612358726 0.0 15 0.0 0.0 0.0 7.627330104212535 0.0 16 0.0 0.0 0.0 8.017760164391603 0.0 17 0.0 0.0 0.0 8.543226185234111 0.0 18 0.0 0.0 0.0 9.150154117129018 0.0 19 0.0 0.0 0.0 9.498018494055483 0.0 20 0.0 0.0 0.0 9.872302950242185 0.0 21 0.0 0.0 0.0 10.255394099515632 0.0 22 0.0 0.0 0.0 10.718479377660355 0.0 23 0.0 0.0 0.0 11.205049170703068 0.0 24 0.0 0.0 0.0 11.581535300161455 0.0 25 0.0 0.0 0.0 11.905915162189931 0.0 26 0.0 0.0 0.0 12.206810509320416 0.0 27 0.0 0.0 0.0 12.517246440628211 0.0 28 0.0 0.0 0.0 12.835021282841627 0.0 29 0.0 0.0 0.0 13.174078966681344 0.0 30 0.0 0.0 0.0 13.568912373403787 0.0 31 0.0 0.0 0.0 13.949067958314986 0.0 32 0.0 0.0 0.0 14.338030236312932 0.0 33 0.0 0.0 0.0 14.704975781594012 0.0 34 0.0 0.0 0.0 15.06091296051666 0.0 35 0.0 0.0 0.0 15.460883604873036 0.0 36 0.0 0.0 0.0 15.833700278878615 0.0 37 0.0 0.0 0.0 16.19257302216351 0.0 38 0.0 0.0 0.0 16.57859973579921 0.0 39 0.0 0.0 0.0 16.99691765741964 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGCGG 35 1.2014061E-7 45.000004 2 CGGTTTT 70 0.0 45.000004 1 GGCGATC 35 1.2014061E-7 45.000004 8 AGACTAT 20 7.011392E-4 45.0 34 GATAATT 20 7.011392E-4 45.0 9 CTCGTCC 45 3.8016879E-10 45.0 37 GGGTATC 20 7.011392E-4 45.0 8 TAGCGGG 85 0.0 45.0 3 GACCGAT 25 3.8726685E-5 45.0 9 TCCTCGT 45 3.8016879E-10 45.0 35 CCTCGTC 45 3.8016879E-10 45.0 36 ACGGGTA 20 7.011392E-4 45.0 5 CTACGAA 20 7.011392E-4 45.0 11 TACGAAT 25 3.8726685E-5 45.0 12 GCGATGT 25 3.8726685E-5 45.0 9 GCGATGA 25 3.8726685E-5 45.0 9 TCGAGGG 25 3.8726685E-5 45.0 3 ATAGTGG 20 7.011392E-4 45.0 1 AGCTACG 20 7.011392E-4 45.0 9 CGTCCCC 45 3.8016879E-10 45.0 39 >>END_MODULE