##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936333.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 226765 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89658016007761 33.0 31.0 34.0 30.0 34.0 2 32.007889224527595 33.0 31.0 34.0 30.0 34.0 3 31.48985513637466 33.0 31.0 34.0 28.0 34.0 4 35.455489162789675 37.0 35.0 37.0 33.0 37.0 5 35.699583269022995 37.0 35.0 37.0 35.0 37.0 6 35.73606156152845 37.0 35.0 37.0 35.0 37.0 7 26.980936211496484 35.0 16.0 37.0 0.0 37.0 8 31.27577889004035 36.0 23.0 37.0 17.0 37.0 9 36.054898242674135 39.0 32.0 39.0 32.0 39.0 10 36.75338345864662 38.0 35.0 39.0 33.0 39.0 11 37.05438229003594 39.0 37.0 39.0 34.0 39.0 12 37.17224439397614 39.0 37.0 39.0 34.0 39.0 13 37.205719577536215 39.0 37.0 39.0 34.0 39.0 14 38.47558926642118 40.0 38.0 41.0 34.0 41.0 15 38.51706833065067 40.0 38.0 41.0 34.0 41.0 16 38.43351487222455 40.0 38.0 41.0 34.0 41.0 17 38.30849998897537 40.0 38.0 41.0 34.0 41.0 18 38.130875576036864 40.0 37.0 41.0 33.0 41.0 19 37.94183405728397 40.0 37.0 41.0 34.0 41.0 20 37.909805305051485 40.0 36.0 41.0 34.0 41.0 21 37.857478005865104 40.0 36.0 41.0 33.0 41.0 22 37.85610213216325 40.0 36.0 41.0 33.0 41.0 23 37.79265318722025 40.0 36.0 41.0 33.0 41.0 24 37.731501774965274 40.0 35.0 41.0 33.0 41.0 25 37.634066103675615 39.0 35.0 41.0 33.0 41.0 26 37.53069036226931 39.0 35.0 41.0 33.0 41.0 27 37.437069212621 39.0 35.0 41.0 33.0 41.0 28 37.36935153132097 39.0 35.0 41.0 33.0 41.0 29 37.34619981037638 39.0 35.0 41.0 33.0 41.0 30 37.25637113311137 39.0 35.0 41.0 33.0 41.0 31 37.10222917998809 39.0 35.0 41.0 32.0 41.0 32 36.87517033051838 39.0 35.0 41.0 31.0 41.0 33 36.61662073071241 39.0 35.0 41.0 30.0 41.0 34 36.315692456948824 39.0 35.0 41.0 30.0 41.0 35 36.064877736864155 39.0 35.0 41.0 28.0 41.0 36 35.83994884572134 39.0 35.0 41.0 27.0 41.0 37 35.754948955967635 39.0 35.0 41.0 26.0 41.0 38 35.60284435428748 39.0 35.0 41.0 25.0 41.0 39 35.5448592154874 39.0 35.0 41.0 25.0 41.0 40 35.37384076025842 39.0 35.0 40.0 24.0 41.0 41 35.298308821908144 39.0 35.0 40.0 24.0 41.0 42 35.24169514695831 39.0 35.0 40.0 24.0 41.0 43 35.21024408528653 39.0 35.0 40.0 24.0 41.0 44 35.04014728904372 38.0 34.0 40.0 23.0 41.0 45 34.95354221330452 38.0 34.0 40.0 23.0 41.0 46 34.83731616431107 38.0 34.0 40.0 23.0 41.0 47 34.711189998456554 38.0 34.0 40.0 23.0 41.0 48 34.63568010936432 38.0 34.0 40.0 22.0 41.0 49 34.49336537825502 38.0 34.0 40.0 21.0 41.0 50 34.268114567944785 38.0 34.0 40.0 20.0 41.0 51 32.37943245209799 36.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 21.0 10 7.0 11 12.0 12 16.0 13 4.0 14 8.0 15 14.0 16 28.0 17 51.0 18 95.0 19 158.0 20 263.0 21 480.0 22 803.0 23 1208.0 24 1965.0 25 2969.0 26 3825.0 27 4116.0 28 4180.0 29 4249.0 30 4558.0 31 5562.0 32 7035.0 33 9317.0 34 14410.0 35 17960.0 36 19941.0 37 32315.0 38 42127.0 39 49049.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.432738738341456 19.816550173086675 24.203911538376733 17.546799550195136 2 35.12667298745397 24.259475668643752 24.73221176107424 15.881639582828038 3 30.317729808391945 23.64165545829383 30.82750865433378 15.213106078980443 4 25.783079399378213 24.303133199567835 32.20646925230966 17.707318148744296 5 23.97856812118272 28.815293365378253 29.680947236125505 17.525191277313517 6 24.43895662910943 32.628933036403325 29.6827111767689 13.249399157718342 7 58.79566952572046 26.873194716997773 10.978325579344254 3.3528101779375126 8 80.23813198685865 4.456596035543404 12.32641721606068 2.9788547615372742 9 74.22177143739113 7.270522346923027 13.713315546931845 4.794390668753996 10 36.79359689546447 32.97466540250921 19.672348025488944 10.559389676537384 11 25.98901946949485 24.8578925319163 32.98613101669129 16.16695698189756 12 25.40295019072608 22.167883050735345 34.31129142504355 18.11787533349503 13 21.764822613719048 23.555663351928207 36.148876590302734 18.530637444050008 14 18.333958062311204 26.46351950256874 34.86825568319626 20.3342667519238 15 18.053491500011024 27.294776530769738 37.11816197384958 17.533569995369653 16 21.829647432363902 27.16115802703239 34.06742663109386 16.941767909509846 17 21.580490816484023 26.440147289043725 32.867506008422815 19.111855886049433 18 22.154653495909862 26.440588274204575 33.73227790884837 17.6724803210372 19 21.741009415033183 28.68564372808855 31.882786144246246 17.69056071263202 20 23.98474191343461 26.98211805172756 32.82737635878553 16.2057636760523 21 23.188763698101557 27.01430996846956 32.92130619804644 16.875620135382444 22 22.17626176879148 24.648424580512867 32.91998324256389 20.255330408131766 23 21.136859744669593 26.59669702114524 33.696558110819566 18.569885123365598 24 21.174343483341783 25.188190417392452 34.1776729213062 19.45979317795956 25 19.988975370978768 27.637862985910523 32.036248980221814 20.336912662888892 26 20.13538244438075 27.52011994796375 31.91938791259674 20.42510969505876 27 20.034837827707097 27.75957489030494 32.583952549996695 19.621634731991268 28 18.15006725023703 28.051066081626352 34.02597402597402 19.77289264216259 29 20.315304390007277 26.078539457147265 33.20485965647256 20.401296496372897 30 20.931360659713803 26.339161687209224 32.936299693515316 19.79317795956166 31 21.541684122329283 26.50849998897537 31.580270323903605 20.369545564791743 32 21.898000132295547 26.971975393028025 31.922033823561836 19.20799065111459 33 21.207858355566337 27.446916411262762 31.380504046038848 19.964721187132053 34 19.49683593147091 27.902895067580975 32.55528851454149 20.044980486406633 35 19.88710779882257 28.395034507088834 31.589090027120587 20.128767666968006 36 19.925473507816463 30.202632681410268 30.45575816373779 19.416135647035475 37 20.4656803298569 29.82382642824069 31.096068617291028 18.61442462461138 38 19.911361982669284 29.75547372830904 30.121050426653145 20.21211386236853 39 21.05792340087756 28.60450245849227 30.857495645271538 19.480078495358633 40 20.849778404956673 28.436487112208674 31.062994730227327 19.650739752607326 41 18.98882102617247 28.614645117191806 31.2826053403303 21.113928516305428 42 20.171102242409546 27.796176658655437 30.544837166229357 21.487883932705664 43 21.074680836989835 27.18100235927061 30.513968204969906 21.230348598769652 44 20.3003108945384 27.87996383921681 29.683593147090598 22.13613211915419 45 20.683526999316474 27.385178488743854 29.479417017617358 22.451877494322318 46 20.39115383767336 29.339624721628116 28.80029986990938 21.468921570789142 47 19.743346636385688 27.7860339999559 31.388882764094987 21.081736599563424 48 20.43216545763235 26.875399642802016 31.227482195224134 21.4649527043415 49 20.064383833484005 26.772209115163275 31.689634643794236 21.473772407558485 50 18.886953454016272 26.974621303993118 32.20558728198796 21.932837960002647 51 19.245474389786786 26.806164972548675 30.220272087844247 23.7280885498203 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 224.5 2 375.0 3 3123.0 4 5871.0 5 4087.5 6 2304.0 7 1944.5 8 1585.0 9 1561.5 10 1538.0 11 1529.5 12 1521.0 13 1479.5 14 1438.0 15 1438.0 16 1438.0 17 1340.0 18 1242.0 19 1291.0 20 1340.0 21 1378.5 22 1417.0 23 1576.0 24 1735.0 25 2051.0 26 2790.0 27 3213.0 28 3815.0 29 4417.0 30 5010.0 31 5603.0 32 6398.0 33 7193.0 34 7952.5 35 8712.0 36 9289.5 37 9867.0 38 10422.0 39 10977.0 40 11895.5 41 12814.0 42 14024.0 43 15234.0 44 17120.5 45 19007.0 46 18326.0 47 17645.0 48 16914.0 49 16183.0 50 14622.0 51 13061.0 52 12013.0 53 10965.0 54 9976.0 55 8987.0 56 8604.0 57 8221.0 58 7983.5 59 7746.0 60 7426.0 61 7106.0 62 6302.5 63 5499.0 64 4603.5 65 3708.0 66 3002.0 67 2296.0 68 1903.0 69 1510.0 70 1251.0 71 992.0 72 814.5 73 637.0 74 496.5 75 305.0 76 254.0 77 200.0 78 146.0 79 108.5 80 71.0 81 57.0 82 43.0 83 33.5 84 24.0 85 17.0 86 10.0 87 10.0 88 10.0 89 7.0 90 4.0 91 4.5 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 226765.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.59836929472822 #Duplication Level Percentage of deduplicated Percentage of total 1 66.65972443907975 31.728941809361388 2 12.526282485004387 11.924612392226495 3 6.854203594855216 9.787467417875169 4 4.179318174684731 7.957149195152533 5 2.877189691209858 6.847476872659593 6 1.9830878955763291 5.663504999852853 7 1.4218397796267692 4.737407843602696 8 1.0128919884535157 3.8569605537665628 9 0.7094214341410972 3.0390573067059288 >10 1.7461910975048547 10.765278341351218 >50 0.015919690593845546 0.5773117807870848 >100 0.010944787283268814 1.1011073751681477 >500 0.0019899613242306932 0.5692606730976832 >1k 9.949806621153466E-4 1.444463438392624 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3050 1.3450047405904793 No Hit GAATCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTC 681 0.30031089453839876 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 521 0.2297532688025048 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCG 426 0.18785967852181773 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGC 388 0.17110224240954292 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 341 0.15037593984962408 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.045421471567481754 0.0 2 0.0 0.0 0.0 0.2676779926355478 0.0 3 0.0 0.0 0.0 0.41540802152007583 0.0 4 0.0 0.0 0.0 0.6473662161268273 0.0 5 0.0 0.0 0.0 1.3604392212202059 0.0 6 0.0 0.0 0.0 1.802306352391242 0.0 7 0.0 0.0 0.0 2.1824355610433708 0.0 8 0.0 0.0 0.0 2.8536149758560625 0.0 9 0.0 0.0 0.0 3.2130178819482724 0.0 10 0.0 0.0 0.0 4.053094613366261 0.0 11 0.0 0.0 0.0 4.6969329482062925 0.0 12 0.0 0.0 0.0 5.435583092628933 0.0 13 0.0 0.0 0.0 5.733248076202236 0.0 14 0.0 0.0 0.0 5.8686305205829825 0.0 15 0.0 0.0 0.0 6.060900050713293 0.0 16 0.0 0.0 0.0 6.357242078804048 0.0 17 0.0 0.0 0.0 6.738253257777876 0.0 18 0.0 0.0 0.0 7.151456353493705 0.0 19 0.0 0.0 0.0 7.43412784159813 0.0 20 0.0 0.0 0.0 7.695191056820938 0.0 21 0.0 0.0 0.0 8.022843031331996 0.0 22 0.0 0.0 0.0 8.36592948647278 0.0 23 0.0 0.0 0.0 8.736357021586224 0.0 24 0.0 0.0 0.0 9.037108901285471 0.0 25 0.0 0.0 0.0 9.294644235221485 0.0 26 0.0 0.0 0.0 9.559235331731088 0.0 27 0.0 0.0 0.0 9.830441205653429 0.0 28 0.0 0.0 0.0 10.106056931184266 0.0 29 0.0 0.0 0.0 10.401957974114172 0.0 30 0.0 0.0 0.0 10.74195753312901 0.0 31 0.0 0.0 0.0 11.036094635415518 0.0 32 4.409851608493374E-4 0.0 0.0 11.35492690670959 0.0 33 4.409851608493374E-4 0.0 0.0 11.658324697373933 0.0 34 4.409851608493374E-4 0.0 0.0 11.930412541617974 0.0 35 4.409851608493374E-4 0.0 0.0 12.25189072387714 0.0 36 4.409851608493374E-4 0.0 0.0 12.579983683549049 0.0 37 4.409851608493374E-4 0.0 0.0 12.890437236786982 0.0 38 4.409851608493374E-4 0.0 0.0 13.245430291270699 0.0 39 4.409851608493374E-4 0.0 0.0 13.619385707670936 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGGCGG 20 7.021299E-4 45.0 2 CGGTTTA 20 7.021299E-4 45.0 1 TAGCGGA 20 7.021299E-4 45.0 1 CGACCCC 20 7.021299E-4 45.0 20 ACGGGCT 25 3.880872E-5 45.0 5 TATTGCG 20 7.021299E-4 45.0 1 TACGAAT 25 3.880872E-5 45.0 12 ACTACTA 20 7.021299E-4 45.0 23 AGCTCGG 20 7.021299E-4 45.0 2 TAGTGCG 20 7.021299E-4 45.0 1 TAAGCGG 25 3.880872E-5 45.0 2 CGTTTTA 225 0.0 43.0 1 CGTTTTT 1190 0.0 42.542015 1 GCACGGG 80 0.0 42.1875 3 ACGAGCG 65 0.0 41.53846 16 GGCGATT 80 0.0 39.375 8 CGGTTTT 75 0.0 39.000004 1 ACAACGA 70 0.0 38.571426 13 AGCGACT 70 0.0 38.571426 19 GCGATCA 35 6.2261333E-6 38.571426 9 >>END_MODULE