SRR2936332.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936332.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	102452
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG	353	0.3445515948932183	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC	265	0.258657712880178	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC	246	0.2401124429000898	No Hit
GCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC	192	0.1874048334829969	TruSeq Adapter, Index 23 (95% over 22bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.18447663295982508	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	185	0.18057236559559597	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	127	0.12396048881427399	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACGA	25	3.8658953E-5	45.0	13
GTGTTAT	20	7.003207E-4	45.0	21
TTGATAT	20	7.003207E-4	45.0	42
CATATCA	20	7.003207E-4	45.0	29
TCACATA	20	7.003207E-4	45.0	33
CCCTAGC	25	3.8658953E-5	45.0	21
CATGAGG	25	3.8658953E-5	45.0	2
TGAAACG	25	3.8658953E-5	45.0	4
CCTCGGG	20	7.003207E-4	45.0	3
TAGTTAA	20	7.003207E-4	45.0	38
AACGGCT	25	3.8658953E-5	45.0	7
ATATCAC	20	7.003207E-4	45.0	30
CAAGGGT	20	7.003207E-4	45.0	5
AACGAGC	25	3.8658953E-5	45.0	15
GACGGAA	20	7.003207E-4	45.0	5
GGACGGA	20	7.003207E-4	45.0	4
TTAACCA	20	7.003207E-4	45.0	14
CAGTCTC	25	3.8658953E-5	45.0	6
ATAGTTA	20	7.003207E-4	45.0	37
ATTATAC	25	3.8658953E-5	45.0	42