##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936332.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 102452 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.926629055557726 33.0 31.0 34.0 30.0 34.0 2 32.03833990551673 33.0 31.0 34.0 30.0 34.0 3 31.94427634404404 33.0 31.0 34.0 30.0 34.0 4 35.702602194198256 37.0 35.0 37.0 35.0 37.0 5 35.77789599031742 37.0 35.0 37.0 35.0 37.0 6 35.764553156600165 37.0 35.0 37.0 35.0 37.0 7 26.86245266075821 35.0 11.0 37.0 0.0 37.0 8 31.152032171163082 35.0 19.0 37.0 17.0 37.0 9 35.81923242103619 39.0 32.0 39.0 32.0 39.0 10 36.62846015695155 38.0 35.0 39.0 33.0 39.0 11 37.01090266661461 39.0 37.0 39.0 34.0 39.0 12 37.027027290828876 39.0 37.0 39.0 34.0 39.0 13 36.92577987740601 39.0 37.0 39.0 33.0 39.0 14 38.090588763518525 40.0 37.0 41.0 33.0 41.0 15 38.16864482879787 40.0 37.0 41.0 33.0 41.0 16 38.15013860149143 40.0 37.0 41.0 33.0 41.0 17 38.091213446296806 40.0 37.0 41.0 33.0 41.0 18 37.97394877601218 40.0 37.0 41.0 33.0 41.0 19 37.889177370866356 40.0 37.0 41.0 33.0 41.0 20 37.93236832858314 40.0 36.0 41.0 33.0 41.0 21 37.90283254597275 40.0 36.0 41.0 33.0 41.0 22 37.89861593721938 40.0 36.0 41.0 33.0 41.0 23 37.86610315074376 40.0 36.0 41.0 33.0 41.0 24 37.810564947487606 40.0 36.0 41.0 33.0 41.0 25 37.71973216725881 40.0 36.0 41.0 33.0 41.0 26 37.57415179791512 39.0 36.0 41.0 33.0 41.0 27 37.435667434505916 39.0 36.0 41.0 33.0 41.0 28 37.35054464529731 39.0 36.0 41.0 32.0 41.0 29 37.357806582594776 39.0 36.0 41.0 32.0 41.0 30 37.31082848553469 39.0 36.0 41.0 32.0 41.0 31 37.14674188888455 39.0 35.0 41.0 32.0 41.0 32 37.05497208448835 39.0 35.0 41.0 31.0 41.0 33 36.934291180260026 39.0 35.0 41.0 31.0 41.0 34 36.80536251122477 39.0 35.0 41.0 31.0 41.0 35 36.74271854136571 39.0 35.0 41.0 31.0 41.0 36 36.509497130363485 39.0 35.0 41.0 30.0 41.0 37 36.41380353726623 39.0 35.0 41.0 30.0 41.0 38 36.27810096435404 39.0 35.0 41.0 30.0 41.0 39 36.2290438449225 39.0 35.0 40.0 29.0 41.0 40 36.0483738726428 39.0 35.0 40.0 28.0 41.0 41 35.892437434115486 39.0 35.0 40.0 28.0 41.0 42 35.81715339866474 38.0 35.0 40.0 28.0 41.0 43 35.74100066372545 38.0 35.0 40.0 28.0 41.0 44 35.5002732987155 38.0 34.0 40.0 26.0 41.0 45 35.37346269472533 38.0 34.0 40.0 26.0 41.0 46 35.181128723695 38.0 34.0 40.0 26.0 41.0 47 35.001141998204034 38.0 34.0 40.0 24.0 41.0 48 34.89279857884668 38.0 34.0 40.0 24.0 41.0 49 34.70754109241401 38.0 34.0 40.0 24.0 41.0 50 34.4637195955179 37.0 33.0 40.0 23.0 41.0 51 32.223899972670125 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 10.0 10 10.0 11 11.0 12 5.0 13 3.0 14 4.0 15 3.0 16 14.0 17 21.0 18 47.0 19 77.0 20 122.0 21 226.0 22 312.0 23 452.0 24 620.0 25 853.0 26 1039.0 27 1332.0 28 1462.0 29 1759.0 30 2236.0 31 2784.0 32 3460.0 33 4790.0 34 7217.0 35 8972.0 36 9515.0 37 14794.0 38 19526.0 39 20767.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.16019208995432 19.507671885370712 23.938039276929686 12.394096747745285 2 31.809042283215554 25.909694295865382 24.686682544020613 17.59458087689845 3 32.65138796704798 25.08882208253621 24.938507789013393 17.32128216140241 4 28.899387030023817 25.82672861437551 26.095146995666262 19.17873735993441 5 26.14883067192441 29.371803381095535 24.349939483855852 20.129426463124194 6 24.92484285323859 36.53613399445594 25.09663061726467 13.442392535040801 7 58.81973997579354 28.455276617342758 7.9149260141334485 4.810057392730254 8 77.59926599773553 8.06816850817944 9.20723851169328 5.125326982391754 9 70.09233592316401 10.24284543005505 11.531253660250654 8.133564986530278 10 39.95041580447429 27.868660445867334 18.54722211377035 13.633701635888027 11 31.795377347440752 26.259126224963886 24.374341154882288 17.571155272713078 12 32.71776051223988 22.593019169952758 27.471401241557018 17.21781907625034 13 25.302580720727757 27.142466716120722 27.88720571584742 19.667746847304105 14 18.848826767657048 31.297583258501543 27.15710771873658 22.69648225510483 15 18.054308359036426 28.799828212235973 34.92464763987038 18.22121578885722 16 20.312927029242964 26.377230312731815 32.70995197751142 20.599890680513802 17 20.747276773513452 25.47534455159489 29.369851247413425 24.407527427478236 18 20.809745051341118 28.461133018389102 29.587514152969195 21.14160777730059 19 24.05809549837973 28.84765548744778 26.292312497559834 20.801936516612656 20 26.083434193573574 26.90235427322063 28.188810369734117 18.825401163471675 21 24.391910358021317 28.494319290985047 27.259594737047593 19.854175613946044 22 21.312419474485615 27.56217545777535 25.993636044196304 25.131769023542734 23 22.25237184242377 28.774450474368486 27.230312731815875 21.742864951391873 24 22.557880763674696 26.461172061062744 28.26494358333659 22.716003591925976 25 20.652598289930896 29.067270526685668 27.06633350251825 23.213797680865188 26 21.142583844141647 29.574825284035448 27.219575996564245 22.06301487525866 27 23.44805372271893 30.629953539218363 25.52805216101199 20.393940577050717 28 20.05817358372701 29.475266466247607 28.915004099480733 21.551555850544645 29 22.16354975988756 27.100495841955258 28.140007027681257 22.59594737047593 30 23.073244055752937 28.45820481786593 26.150782805606525 22.317768320774604 31 22.506149221098664 29.311287236949983 25.270370514972868 22.912193026978485 32 24.300160074961934 29.379611915823993 24.91020185062273 21.410026158591343 33 23.371920509116464 29.366923046890253 24.74231835396088 22.518838090032407 34 21.80338109553742 28.3674306016476 26.909186741108034 22.920001561706947 35 23.394370046460782 25.22156717292 27.13465818139226 24.249404599226956 36 23.54956467418889 29.861788935306286 25.76621247022996 20.82243392027486 37 22.23773083980791 30.225861867020654 27.919415921602308 19.616991371569124 38 20.45445672119627 28.794947878030687 26.912114941631206 23.83848045914184 39 21.584742123140593 26.719829773942923 27.866708312185217 23.82871979073127 40 22.59594737047593 25.026353804708545 31.016476008277046 21.36122281653848 41 19.91957209229688 27.64416507242416 29.8159137937766 22.620349041502365 42 21.014719087963144 28.053137078827156 28.64463358450787 22.28751024870183 43 24.44071370007418 26.915043142154378 26.376254245890756 22.267988911880686 44 22.034708936867997 27.786670831218522 26.295240698083006 23.883379533830475 45 20.916136337016358 27.155155585054462 26.516807871003007 25.41190020692617 46 22.077655877874516 29.153164408698707 26.564635146214812 22.20454456721196 47 21.348533947604732 27.086830906180452 30.178034591808846 21.386600554405966 48 21.630617264670285 24.997071799476828 29.842267598485144 23.530043337367744 49 20.09624019052825 26.55975481200953 29.120954202943818 24.223050794518407 50 19.502791551165423 26.29719283176512 29.41475032210206 24.7852652949674 51 19.708741654628508 25.719361261859213 27.888181782688477 26.683715300823803 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 67.0 1 184.0 2 301.0 3 377.5 4 454.0 5 348.0 6 242.0 7 230.5 8 219.0 9 218.5 10 218.0 11 220.5 12 223.0 13 225.0 14 227.0 15 240.0 16 253.0 17 271.0 18 289.0 19 299.5 20 310.0 21 373.0 22 436.0 23 522.0 24 608.0 25 796.0 26 1083.0 27 1182.0 28 1415.5 29 1649.0 30 1936.0 31 2223.0 32 2437.0 33 2651.0 34 2924.0 35 3197.0 36 3404.5 37 3612.0 38 4046.5 39 4481.0 40 4858.5 41 5236.0 42 5872.0 43 6508.0 44 7216.5 45 7925.0 46 8817.5 47 9710.0 48 9345.5 49 8981.0 50 8437.5 51 7894.0 52 6915.0 53 5936.0 54 5417.0 55 4898.0 56 4729.5 57 4561.0 58 4436.5 59 4312.0 60 4164.0 61 4016.0 62 3635.0 63 3254.0 64 2754.5 65 2255.0 66 1695.5 67 1136.0 68 947.5 69 759.0 70 645.5 71 532.0 72 402.0 73 272.0 74 222.0 75 143.5 76 115.0 77 95.0 78 75.0 79 56.5 80 38.0 81 29.5 82 21.0 83 14.5 84 8.0 85 8.0 86 8.0 87 4.0 88 0.0 89 0.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 102452.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.557880763674696 #Duplication Level Percentage of deduplicated Percentage of total 1 71.91938264510303 34.203334244329056 2 9.506608652819965 9.042283215554601 3 4.933913471800345 7.0393940577050715 4 3.3433215663738607 6.360051536329207 5 2.434118709465561 5.788076367469644 6 1.7301535177735818 4.9369460820677 7 1.4181922666447748 4.721235310194042 8 1.0631311058205402 4.04482098934135 9 0.8496839339955669 3.636825049779409 >10 2.754289467203021 17.632647483699685 >50 0.03283802643461128 1.0746495920040604 >100 0.014366636565142435 1.519736071526178 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG 353 0.3445515948932183 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC 265 0.258657712880178 No Hit GAATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 246 0.2401124429000898 No Hit GCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 192 0.1874048334829969 TruSeq Adapter, Index 23 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 189 0.18447663295982508 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 185 0.18057236559559597 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 127 0.12396048881427399 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15909889509233593 0.0 2 0.0 0.0 0.0 0.8198961464881115 0.0 3 0.0 0.0 0.0 1.059032522547144 0.0 4 0.0 0.0 0.0 1.3782063795728732 0.0 5 0.0 0.0 0.0 2.539725920431031 0.0 6 0.0 0.0 0.0 3.046304610939757 0.0 7 0.0 0.0 0.0 3.62218404716355 0.0 8 0.0 0.0 0.0 4.5113809393667275 0.0 9 0.0 0.0 0.0 4.876429937922149 0.0 10 0.0 0.0 0.0 6.151173232342951 0.0 11 0.0 0.0 0.0 7.292195369538906 0.0 12 0.0 0.0 0.0 8.532776324522704 0.0 13 0.0 0.0 0.0 8.978838870885879 0.0 14 0.0 0.0 0.0 9.17893257330262 0.0 15 0.0 0.0 0.0 9.528364502401125 0.0 16 0.0 0.0 0.0 10.229180494280248 0.0 17 0.0 0.0 0.0 10.960254558232148 0.0 18 0.0 0.0 0.0 11.734275563190566 0.0 19 0.0 0.0 0.0 12.172529574825283 0.0 20 0.0 0.0 0.0 12.623472455393745 0.0 21 0.0 0.0 0.0 13.14859641588256 0.0 22 0.0 0.0 0.0 13.72838011947058 0.0 23 0.0 0.0 0.0 14.254480146800454 0.0 24 0.0 0.0 0.0 14.710303361574201 0.0 25 0.0 0.0 0.0 15.121227501659314 0.0 26 0.0 0.0 0.0 15.533127708585484 0.0 27 0.0 0.0 0.0 15.88548783820716 0.0 28 0.0 0.0 0.0 16.271034240424783 0.0 29 0.0 0.0 0.0 16.669269511576154 0.0 30 0.0 0.0 0.0 17.09678678795924 0.0 31 0.0 0.0 0.0 17.56627493850779 0.0 32 0.0 0.0 0.0 17.993792214890874 0.0 33 9.760668410572756E-4 0.0 0.0 18.427165892320307 0.0 34 9.760668410572756E-4 0.0 0.0 18.85273103502128 0.0 35 9.760668410572756E-4 0.0 0.0 19.302697848748682 0.0 36 9.760668410572756E-4 0.0 0.0 19.77316206613829 0.0 37 9.760668410572756E-4 0.0 0.0 20.204583609885606 0.0 38 9.760668410572756E-4 0.0 0.0 20.645765822043494 0.0 39 9.760668410572756E-4 0.0 0.0 21.06645063053918 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 25 3.8658953E-5 45.0 13 GTGTTAT 20 7.003207E-4 45.0 21 TTGATAT 20 7.003207E-4 45.0 42 CATATCA 20 7.003207E-4 45.0 29 TCACATA 20 7.003207E-4 45.0 33 CCCTAGC 25 3.8658953E-5 45.0 21 CATGAGG 25 3.8658953E-5 45.0 2 TGAAACG 25 3.8658953E-5 45.0 4 CCTCGGG 20 7.003207E-4 45.0 3 TAGTTAA 20 7.003207E-4 45.0 38 AACGGCT 25 3.8658953E-5 45.0 7 ATATCAC 20 7.003207E-4 45.0 30 CAAGGGT 20 7.003207E-4 45.0 5 AACGAGC 25 3.8658953E-5 45.0 15 GACGGAA 20 7.003207E-4 45.0 5 GGACGGA 20 7.003207E-4 45.0 4 TTAACCA 20 7.003207E-4 45.0 14 CAGTCTC 25 3.8658953E-5 45.0 6 ATAGTTA 20 7.003207E-4 45.0 37 ATTATAC 25 3.8658953E-5 45.0 42 >>END_MODULE