SRR2936331.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936331.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	77911
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG	292	0.37478661549716985	No Hit
GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	267	0.3426987203347409	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	244	0.3131778567853063	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC	231	0.2964921513008433	No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	213	0.27338886678389446	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC	208	0.26697128775140866	No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT	181	0.23231636097598543	No Hit
TCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	106	0.13605267548869865	No Hit
GCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCAGAAGCTAATGGCTG	86	0.11038235935875551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCTC	25	3.857302E-5	45.000004	5
AGGGTTC	25	3.857302E-5	45.000004	7
GTCTTTA	25	3.857302E-5	45.000004	29
TAGCTGG	25	3.857302E-5	45.000004	2
TCACGGG	20	6.992821E-4	45.0	3
GTTTCGT	20	6.992821E-4	45.0	10
CACGGGC	20	6.992821E-4	45.0	4
TGCCAAT	20	6.992821E-4	45.0	14
GGGTCCG	20	6.992821E-4	45.0	8
TTTCGTT	20	6.992821E-4	45.0	11
TAGGTAA	20	6.992821E-4	45.0	6
GTATGGG	20	6.992821E-4	45.0	3
GGGAACA	20	6.992821E-4	45.0	7
GCGATCT	20	6.992821E-4	45.0	9
GGTTGCC	20	6.992821E-4	45.0	11
TAAGGAG	20	6.992821E-4	45.0	5
ATAAACC	20	6.992821E-4	45.0	30
AGCTAGG	35	1.1925476E-7	45.0	2
CAATCTT	20	6.992821E-4	45.0	17
TTCGAGT	20	6.992821E-4	45.0	14