SRR2936329.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936329.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	201218
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3031	1.5063264717868183	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC	615	0.30563866055720657	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	548	0.2723414406265841	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG	546	0.27134749376298345	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGC	366	0.18189227603892297	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	287	0.14263137492669642	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGCT	20	7.019403E-4	45.000004	5
CGAGTAT	20	7.019403E-4	45.000004	27
AATGCGG	20	7.019403E-4	45.000004	2
TACGAAT	30	2.1565502E-6	45.000004	12
TCTAAGG	30	2.1565502E-6	45.000004	3
AACGAAG	20	7.019403E-4	45.000004	1
GGCGATC	40	6.7666406E-9	45.000004	8
GCGCTCA	20	7.019403E-4	45.000004	33
TGTACGG	20	7.019403E-4	45.000004	2
CGGGATA	35	1.2052624E-7	45.0	6
GCTACGA	25	3.8793027E-5	45.0	10
CGTTTTT	1115	0.0	43.789234	1
CGTTTTA	210	0.0	42.857143	1
ATCTATC	50	1.0713848E-9	40.5	3
CGGTTTT	140	0.0	40.17857	1
TGCGAGG	45	1.9146682E-8	40.0	2
ACAGGAT	40	3.4392906E-7	39.375004	5
GGGTTAT	35	6.222632E-6	38.571426	7
AAAGCGG	35	6.222632E-6	38.571426	2
TCTATCT	65	9.094947E-12	38.07692	4