##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936327.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 139013 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.67544042643494 31.0 31.0 34.0 30.0 34.0 2 31.783480681662866 31.0 31.0 34.0 30.0 34.0 3 31.65044276434578 31.0 31.0 34.0 30.0 34.0 4 35.46163308467553 37.0 35.0 37.0 33.0 37.0 5 35.58816801306352 37.0 35.0 37.0 33.0 37.0 6 35.551998733931356 37.0 35.0 37.0 33.0 37.0 7 27.039521483602254 35.0 19.0 37.0 0.0 37.0 8 31.18136433283218 35.0 25.0 37.0 17.0 37.0 9 35.82410278175423 39.0 32.0 39.0 32.0 39.0 10 36.4343838346054 37.0 35.0 39.0 32.0 39.0 11 36.73845611561509 38.0 35.0 39.0 33.0 39.0 12 36.9233956536439 39.0 37.0 39.0 33.0 39.0 13 36.90585053196464 39.0 37.0 39.0 33.0 39.0 14 38.057196089574354 40.0 37.0 41.0 33.0 41.0 15 38.07840993288397 40.0 37.0 41.0 33.0 41.0 16 38.00672598965564 40.0 37.0 41.0 33.0 41.0 17 37.89762108579773 40.0 37.0 41.0 33.0 41.0 18 37.77932999072029 39.0 36.0 41.0 33.0 41.0 19 37.68925208433743 39.0 36.0 41.0 33.0 41.0 20 37.772992453943154 39.0 36.0 41.0 33.0 41.0 21 37.743621100184875 39.0 36.0 41.0 33.0 41.0 22 37.77072647881853 39.0 36.0 41.0 33.0 41.0 23 37.742772258709614 39.0 36.0 41.0 33.0 41.0 24 37.69521555537971 39.0 36.0 41.0 33.0 41.0 25 37.62208570421471 39.0 36.0 41.0 33.0 41.0 26 37.53188550711084 39.0 36.0 41.0 33.0 41.0 27 37.4288303971571 39.0 36.0 41.0 32.0 41.0 28 37.42178069676937 39.0 36.0 41.0 32.0 41.0 29 37.4378007812219 39.0 36.0 41.0 33.0 41.0 30 37.33976678440146 39.0 36.0 41.0 32.0 41.0 31 37.09491198664873 39.0 36.0 41.0 31.0 41.0 32 36.98515966132664 39.0 35.0 41.0 31.0 41.0 33 36.95005503082446 39.0 35.0 40.0 31.0 41.0 34 36.79651543380835 39.0 35.0 40.0 30.0 41.0 35 36.76797134080985 39.0 35.0 40.0 30.0 41.0 36 36.55788307568357 39.0 35.0 40.0 30.0 41.0 37 36.46585571133635 39.0 35.0 40.0 30.0 41.0 38 36.291692143900214 39.0 35.0 40.0 30.0 41.0 39 36.21538273398891 39.0 35.0 40.0 30.0 41.0 40 36.053239625071036 38.0 35.0 40.0 29.0 41.0 41 36.06335378705589 38.0 35.0 40.0 29.0 41.0 42 36.0572392510053 39.0 35.0 40.0 29.0 41.0 43 36.05102400494918 38.0 35.0 40.0 29.0 41.0 44 35.81057167315287 38.0 35.0 40.0 28.0 41.0 45 35.70619294598347 38.0 35.0 40.0 28.0 41.0 46 35.47223640954443 38.0 34.0 40.0 27.0 41.0 47 35.28175062763914 38.0 34.0 40.0 26.0 41.0 48 35.19308266133383 38.0 34.0 40.0 26.0 41.0 49 34.93615705006007 38.0 34.0 40.0 24.0 41.0 50 34.641788897441245 38.0 33.0 40.0 23.0 41.0 51 32.09745131750268 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 6.0 11 2.0 12 1.0 13 6.0 14 1.0 15 3.0 16 8.0 17 11.0 18 37.0 19 70.0 20 119.0 21 200.0 22 331.0 23 481.0 24 698.0 25 1078.0 26 1328.0 27 1744.0 28 2083.0 29 2472.0 30 3211.0 31 4049.0 32 5278.0 33 6749.0 34 9784.0 35 12437.0 36 14183.0 37 20592.0 38 26167.0 39 25868.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.90705905203111 21.495111967945444 26.131369008653866 12.466459971369584 2 28.972110522037507 27.73481616827203 25.815571205570702 17.477502104119758 3 29.259134037823802 26.69822246840224 28.292317984648918 15.750325509125046 4 26.333508376914388 24.76099357614036 30.852510196888062 18.05298785005719 5 25.61343183731018 29.012394524253125 26.58312531921475 18.791048319221943 6 22.80937754023005 35.39884758979376 27.370102076784185 14.421672793192004 7 59.98431801342321 26.34142130592103 9.199859005992245 4.474401674663521 8 79.25373885895564 5.6232150949911155 9.514937451892989 5.608108594160258 9 74.19953529526015 6.565573003963658 11.101839396315452 8.133052304460733 10 35.91750411831987 33.42205405249869 18.128520354211478 12.531921474969968 11 22.694999748224987 25.853697136239056 31.026594635034133 20.424708480501824 12 22.730967607346074 22.389272945695726 34.4888607540302 20.390898692928 13 20.18444318157295 26.43421838245344 35.65925488983045 17.722083546143168 14 18.101184781279446 29.787861566903818 30.336011739909218 21.77494191190752 15 15.339572557962205 28.298792199290713 37.55332235114702 18.808312891600064 16 18.57596052167783 29.175688604662874 30.926603986677502 21.321746886981792 17 18.737815887722732 27.5456252292951 30.46693474710998 23.249624135872185 18 19.016207117319965 27.771503384575542 32.770316445224545 20.44197305287995 19 18.5550991633876 29.760525993971786 28.87211987368088 22.81225496895974 20 20.621812348485395 28.902332875342594 31.442383086473928 19.033471689698086 21 20.16573989482998 30.100781941257292 31.163272499694273 18.570205664218452 22 18.85147432254537 25.537899333155895 29.812319711106156 25.79830663319258 23 16.859574284419445 29.44472819088862 31.13018206930287 22.565515455389065 24 19.78879673124096 25.730687058044932 31.445260515203614 23.035255695510493 25 16.88259371425694 30.854668268435326 29.42386683259839 22.838871184709344 26 17.822793551682217 28.49373799572702 29.260572752188647 24.42289570040212 27 19.20827548502658 28.08298504456418 28.874277945228144 23.834461525181098 28 15.81578701272543 27.2880953579881 33.07028839029444 23.825829238992036 29 19.27085955989728 23.76324516412134 30.55757375209513 26.408321523886258 30 18.76227403192507 26.8456906907987 30.828771409868143 23.563263867408086 31 19.266543416802744 27.901707034593887 28.79946479825628 24.03228475034709 32 21.567047686187625 28.474315351801632 26.675922395747158 23.28271456626359 33 18.95506175681411 25.58609626437815 29.37638925855855 26.082452720249183 34 17.730715832332226 26.88093919273737 30.632386899066994 24.755958075863408 35 17.314208023710012 27.232704854941623 28.314618057303992 27.13846906404437 36 18.658686597656335 26.169494939322224 29.979210577428013 25.192607885593432 37 17.994719918281024 28.070755972463008 31.006452633926322 22.928071475329645 38 17.72711904642012 28.59157057253638 30.5798738247502 23.101436556293294 39 20.83258400293498 25.95440714177811 30.98487191845367 22.228136936833245 40 19.61327357873005 26.9082747656694 31.67401609921374 21.80443555638681 41 16.940142288850684 28.494457352909443 27.606770589800956 26.958629768438925 42 19.219065842762905 25.068159093034463 30.386366742678746 25.326408321523886 43 20.868551862056066 23.58124779696863 29.276398610201927 26.273801730773382 44 19.527670074021856 24.848755152395817 29.943962075489345 25.679612698092985 45 19.42480199693554 24.263198405904486 29.663412774344845 26.648586822815133 46 21.86414220252782 26.71260961205067 28.66206757641372 22.76118060900779 47 16.50061505039097 25.70694827102501 33.23861797098113 24.553818707602886 48 18.642860739643055 24.73293864602591 30.28349866559243 26.34070194873861 49 19.242085272600402 22.6295382446246 33.36378612072252 24.76459036205247 50 18.875932466747713 22.84174861343903 32.581125506247616 25.701193413565637 51 18.28318214843216 23.101436556293294 28.9850589513211 29.63032234395344 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 66.0 1 112.0 2 158.0 3 586.0 4 1014.0 5 704.5 6 395.0 7 350.5 8 306.0 9 313.5 10 321.0 11 347.5 12 374.0 13 380.5 14 387.0 15 388.0 16 389.0 17 390.5 18 392.0 19 407.0 20 422.0 21 496.5 22 571.0 23 651.0 24 731.0 25 929.5 26 1367.5 27 1607.0 28 1784.5 29 1962.0 30 2443.5 31 2925.0 32 3454.5 33 3984.0 34 4329.5 35 4675.0 36 4979.5 37 5284.0 38 5802.5 39 6321.0 40 7007.5 41 7694.0 42 8466.5 43 9239.0 44 10807.5 45 12376.0 46 15789.0 47 19202.0 48 17740.5 49 16279.0 50 15018.0 51 13757.0 52 11324.5 53 8892.0 54 7371.0 55 5850.0 56 4892.5 57 3935.0 58 3382.5 59 2830.0 60 2431.0 61 2032.0 62 1694.5 63 1357.0 64 1125.5 65 894.0 66 705.0 67 516.0 68 417.5 69 319.0 70 251.0 71 183.0 72 153.0 73 123.0 74 96.5 75 49.5 76 29.0 77 19.5 78 10.0 79 7.5 80 5.0 81 3.5 82 2.0 83 2.0 84 2.0 85 1.5 86 1.0 87 1.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 139013.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.986037277089196 #Duplication Level Percentage of deduplicated Percentage of total 1 76.92317402610517 43.83546862523649 2 10.207276124113207 11.633444354125153 3 4.353808477871191 7.44318876651824 4 2.630715241485521 5.996561472668024 5 1.7420283268954024 4.9635645587103365 6 1.0919235527279154 3.733463776769079 7 0.8659648059784392 3.4543531899894253 8 0.6400060592289631 2.917712731902772 9 0.44308111792774374 2.272449339270428 >10 1.0578403898103965 8.256781739837281 >50 0.021459769244363654 0.8855286915612209 >100 0.016410411775101618 1.814218814067749 >500 0.0037870181019465272 1.2970009999064835 >1k 0.002524678734631018 1.4962629394373188 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCG 1042 0.749570184083503 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTC 1038 0.7466927553538159 Illumina PCR Primer Index 2 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGC 707 0.508585527972204 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 571 0.41075295116284083 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 525 0.37766252077143864 Illumina PCR Primer Index 2 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 325 0.2337910842870811 Illumina PCR Primer Index 2 (95% over 24bp) CTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGCT 290 0.2086135829023185 Illumina PCR Primer Index 2 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCT 273 0.1963845108011481 No Hit GAATCTATCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTC 246 0.17696186687575982 Illumina PCR Primer Index 2 (95% over 21bp) GAATGAAACCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCG 241 0.17336508096365089 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTC 199 0.1431520793019358 No Hit TCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 186 0.13380043593045254 Illumina PCR Primer Index 2 (95% over 24bp) GAATGAAACGGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGC 177 0.12732622128865645 No Hit GAACTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCT 167 0.12013264946443858 Illumina PCR Primer Index 2 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.32371073208980455 0.0 2 0.0 0.0 0.0 1.637976304374411 0.0 3 0.0 0.0 0.0 2.095487472394668 0.0 4 0.0 0.0 0.0 2.773121938235992 0.0 5 0.0 0.0 0.0 5.0527648493306385 0.0 6 0.0 0.0 0.0 5.992964686755915 0.0 7 0.0 0.0 0.0 7.125232891887809 0.0 8 0.0 0.0 0.0 9.151662074769986 0.0 9 0.0 0.0 0.0 9.834332040888262 0.0 10 0.0 0.0 0.0 12.282304532669606 0.0 11 0.0 0.0 0.0 14.284275571349442 0.0 12 0.0 0.0 0.0 16.5049311934855 0.0 13 0.0 0.0 0.0 17.193356017063152 0.0 14 0.0 0.0 0.0 17.4623956032889 0.0 15 0.0 0.0 0.0 17.94076812959939 0.0 16 0.0 0.0 0.0 18.832051678619987 0.0 17 0.0 0.0 0.0 20.02906203016984 0.0 18 0.0 0.0 0.0 21.22031752426032 0.0 19 0.0 0.0 0.0 22.02383949702546 0.0 20 0.0 0.0 0.0 22.746793465359357 0.0 21 0.0 0.0 0.0 23.671167444771353 0.0 22 0.0 0.0 0.0 24.706322430276305 0.0 23 0.0 0.0 0.0 25.73356448677462 0.0 24 0.0 0.0 0.0 26.45076359764914 0.0 25 0.0 0.0 0.0 27.070849488896723 0.0 26 0.0 0.0 0.0 27.6743901649486 0.0 27 0.0 0.0 0.0 28.26138562580478 0.0 28 0.0 0.0 0.0 28.87355858804572 0.0 29 7.193571824217879E-4 0.0 0.0 29.510909051671426 0.0 30 7.193571824217879E-4 0.0 0.0 30.29644709487602 0.0 31 7.193571824217879E-4 0.0 0.0 30.954658916791956 0.0 32 7.193571824217879E-4 0.0 0.0 31.54740923510751 0.0 33 7.193571824217879E-4 0.0 0.0 32.15310798270665 0.0 34 7.193571824217879E-4 0.0 0.0 32.70485494162416 0.0 35 7.193571824217879E-4 0.0 0.0 33.32206340414206 0.0 36 7.193571824217879E-4 0.0 0.0 33.88963622107285 0.0 37 7.193571824217879E-4 0.0 0.0 34.48814139684778 0.0 38 7.193571824217879E-4 0.0 0.0 35.1031917878184 0.0 39 7.193571824217879E-4 0.0 0.0 35.66500974728982 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACCT 20 7.011882E-4 45.0 11 ATAGGGC 20 7.011882E-4 45.0 4 CGCGCGG 20 7.011882E-4 45.0 2 TCGGGAA 25 3.8730737E-5 45.0 5 CAACAGG 20 7.011882E-4 45.0 2 CTGACTA 20 7.011882E-4 45.0 22 TGAAACG 25 3.8730737E-5 45.0 4 CCTCCGC 25 3.8730737E-5 45.0 45 GTGCTAG 20 7.011882E-4 45.0 1 CTACGAA 20 7.011882E-4 45.0 11 TACGAAT 20 7.011882E-4 45.0 12 TCATGCG 20 7.011882E-4 45.0 1 CGGGATC 35 1.2016426E-7 45.0 6 GCGATAG 25 3.8730737E-5 45.0 9 CGTAAGG 20 7.011882E-4 45.0 2 GGACCTA 20 7.011882E-4 45.0 8 GGACCCA 20 7.011882E-4 45.0 8 GCTACGA 20 7.011882E-4 45.0 10 GCTAAAG 20 7.011882E-4 45.0 1 TGAGCGG 20 7.011882E-4 45.0 2 >>END_MODULE