SRR2936326.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936326.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	107119
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCG	636	0.5937322043708398	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTC	549	0.5125141198106778	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGC	432	0.40328979919528746	No Hit
GCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	238	0.2221828060381445	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	224	0.20911322921237127	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCT	142	0.13256285066141393	No Hit
CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGCT	132	0.1232274386430045	Illumina Single End Adapter 1 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	131	0.12229389744116356	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCG	121	0.11295848542275412	No Hit
GAATCTATCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTC	113	0.10549015580802658	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCGAT	30	2.1470478E-6	45.000004	8
GCACGGG	35	1.1981865E-7	45.000004	3
AATGAAT	30	2.1470478E-6	45.000004	2
TCTATCT	70	0.0	45.000004	4
AGCGTGG	20	7.00464E-4	45.0	2
ATGGGAT	40	6.715709E-9	45.0	5
CTCACGA	20	7.00464E-4	45.0	24
ACACGGG	25	3.8670794E-5	45.0	3
ATAGGTC	20	7.00464E-4	45.0	5
CGACGGT	20	7.00464E-4	45.0	28
GGCACGG	20	7.00464E-4	45.0	2
CACGACG	20	7.00464E-4	45.0	26
CTACGAA	20	7.00464E-4	45.0	11
TACGAAT	20	7.00464E-4	45.0	12
CGAATAT	20	7.00464E-4	45.0	14
CGGGACC	20	7.00464E-4	45.0	6
CGGGAAC	25	3.8670794E-5	45.0	6
CATACGA	45	3.783498E-10	45.0	18
CGGTCTA	20	7.00464E-4	45.0	31
GCTACGA	20	7.00464E-4	45.0	10