SRR2936323.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936323.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	71376
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCG	704	0.9863259358888142	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGC	676	0.9470970634386908	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTC	442	0.6192557722483748	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	174	0.24377942165433758	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGC	155	0.21715982963461106	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	153	0.21435776731674513	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCG	150	0.21015467383994618	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCT	137	0.19194126877381754	No Hit
AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	124	0.17372786370768886	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTT	119	0.166722707913024	No Hit
GCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTCTGC	110	0.1541134274826272	Illumina PCR Primer Index 8 (95% over 23bp)
GAATCTATCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTC	93	0.13029589778076667	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	88	0.12329074198610178	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTC	78	0.10928043039677203	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	78	0.10928043039677203	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCAGG	20	6.9888425E-4	45.000004	3
CAACGGG	20	6.9888425E-4	45.000004	3
TTATGAC	20	6.9888425E-4	45.000004	27
GAATCTA	20	6.9888425E-4	45.000004	1
TGACGGG	20	6.9888425E-4	45.000004	3
ATCAACG	20	6.9888425E-4	45.000004	15
AAACGGG	20	6.9888425E-4	45.000004	3
GCTTATG	20	6.9888425E-4	45.000004	25
CAAGGCG	20	6.9888425E-4	45.000004	5
TTGGTAG	20	6.9888425E-4	45.000004	1
CATACGA	35	1.1906377E-7	45.000004	18
TTCGGGT	20	6.9888425E-4	45.000004	26
CGCACTT	20	6.9888425E-4	45.000004	35
ACATACG	35	1.1906377E-7	45.000004	17
CACCCAT	35	1.1906377E-7	45.000004	31
TCAACGC	20	6.9888425E-4	45.000004	16
GGGATCA	35	1.1906377E-7	45.000004	7
TGATACC	100	0.0	45.0	4
GATACCT	100	0.0	45.0	5
TAAAGGG	25	3.8540154E-5	45.0	3