SRR2936322.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936322.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	147543
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG	450	0.3049958317236331	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	348	0.2358634431996096	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC	344	0.23315236913984397	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGC	296	0.20061948042265645	No Hit
GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC	191	0.12945378635380872	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTATT	30	2.1526084E-6	45.000004	8
CCCCATT	30	2.1526084E-6	45.000004	42
ATGGGTA	20	7.0132833E-4	45.0	5
AACCGGG	20	7.0132833E-4	45.0	3
ACTGCGC	20	7.0132833E-4	45.0	27
CGTATGG	20	7.0132833E-4	45.0	2
CTCGTCC	25	3.874235E-5	45.0	37
CCGATTG	20	7.0132833E-4	45.0	11
GATTTAC	20	7.0132833E-4	45.0	9
CAACAAT	45	3.8016879E-10	45.0	26
TACGGCT	35	1.2023156E-7	45.0	7
GTAGCAT	35	1.2023156E-7	45.0	29
ATATCAG	20	7.0132833E-4	45.0	37
TAGGGCG	25	3.874235E-5	45.0	5
AATACGG	20	7.0132833E-4	45.0	2
TACACGC	35	1.2023156E-7	45.0	35
TCAACGC	35	1.2023156E-7	45.0	16
ATTTCCG	20	7.0132833E-4	45.0	32
AATTATC	105	0.0	42.857143	45
GGCGATT	55	6.002665E-11	40.90909	8