##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936321.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 88201 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.836237684379995 31.0 31.0 34.0 30.0 34.0 2 31.93190553395086 33.0 31.0 34.0 30.0 34.0 3 31.85911724356867 33.0 31.0 34.0 30.0 34.0 4 35.630673121619935 37.0 35.0 37.0 33.0 37.0 5 35.70739560775955 37.0 35.0 37.0 35.0 37.0 6 35.65274770127323 37.0 35.0 37.0 33.0 37.0 7 27.064477727009898 35.0 19.0 37.0 0.0 37.0 8 31.12544075463997 35.0 25.0 37.0 17.0 37.0 9 35.7460799764175 38.0 32.0 39.0 32.0 39.0 10 36.57050373578531 37.0 35.0 39.0 32.0 39.0 11 36.906679062595664 39.0 37.0 39.0 33.0 39.0 12 36.91357240847609 39.0 35.0 39.0 33.0 39.0 13 36.755830432761535 39.0 35.0 39.0 33.0 39.0 14 37.99869615990748 40.0 37.0 41.0 33.0 41.0 15 38.01104295869661 40.0 37.0 41.0 33.0 41.0 16 38.00250564052562 40.0 37.0 41.0 33.0 41.0 17 37.82308590605549 40.0 36.0 41.0 33.0 41.0 18 37.745909910318474 39.0 36.0 41.0 33.0 41.0 19 37.568678359655785 39.0 36.0 41.0 32.0 41.0 20 37.72509381979796 39.0 36.0 41.0 33.0 41.0 21 37.72477636307978 39.0 36.0 41.0 33.0 41.0 22 37.77722474801873 39.0 36.0 41.0 33.0 41.0 23 37.80483214476026 39.0 36.0 41.0 33.0 41.0 24 37.697112277638574 39.0 36.0 41.0 33.0 41.0 25 37.63430119839911 39.0 36.0 41.0 33.0 41.0 26 37.438702509041846 39.0 36.0 41.0 33.0 41.0 27 37.25996303896781 39.0 35.0 41.0 32.0 41.0 28 37.254192129340936 39.0 35.0 41.0 32.0 41.0 29 37.104862756658086 39.0 35.0 41.0 32.0 41.0 30 36.818618836521125 39.0 35.0 41.0 31.0 41.0 31 36.724912415959004 39.0 35.0 41.0 30.0 41.0 32 36.394031813698255 39.0 35.0 40.0 30.0 41.0 33 36.37504109930726 39.0 35.0 40.0 30.0 41.0 34 36.19108626886317 39.0 35.0 40.0 30.0 41.0 35 35.796952415505494 38.0 35.0 40.0 27.0 41.0 36 35.681999070305324 38.0 35.0 40.0 27.0 41.0 37 35.04888833459938 38.0 34.0 40.0 24.0 41.0 38 35.16852416639267 38.0 34.0 40.0 24.0 41.0 39 34.75970793981928 38.0 34.0 40.0 23.0 41.0 40 34.66126234396435 38.0 33.0 40.0 23.0 41.0 41 34.6537114091677 38.0 34.0 40.0 23.0 41.0 42 34.427455471026406 38.0 33.0 40.0 22.0 41.0 43 34.51602589539801 38.0 33.0 40.0 23.0 41.0 44 34.06335529075634 38.0 33.0 40.0 20.0 41.0 45 34.054840648065216 37.0 33.0 40.0 21.0 41.0 46 33.5099488667929 37.0 32.0 40.0 17.0 41.0 47 33.34692350426866 37.0 32.0 40.0 15.0 41.0 48 33.287026224192466 37.0 32.0 40.0 15.0 41.0 49 33.11130259294112 37.0 31.0 40.0 14.0 41.0 50 32.97672361991361 37.0 31.0 40.0 14.0 41.0 51 30.374236119771886 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 9.0 11 7.0 12 2.0 13 4.0 14 2.0 15 2.0 16 5.0 17 21.0 18 35.0 19 67.0 20 110.0 21 234.0 22 398.0 23 553.0 24 854.0 25 1161.0 26 1424.0 27 1740.0 28 1945.0 29 2119.0 30 2419.0 31 2741.0 32 3447.0 33 4344.0 34 6377.0 35 7993.0 36 7847.0 37 11629.0 38 14842.0 39 15862.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.941644652554956 19.35238829491729 22.055305495402546 11.650661557125202 2 27.568848425754812 31.235473520708386 23.33533633405517 17.86034171948164 3 28.998537431548392 31.128898765320123 25.181120395460372 14.691443407671114 4 25.716261720388655 24.017868278137435 33.45653677395948 16.80933322751443 5 28.989467239600458 26.573394859468713 23.606308318499792 20.830829582431036 6 22.28092652010748 37.84877722474802 26.460017460119502 13.410278795024999 7 56.39618598428589 26.755932472420945 12.303715377376674 4.5441661659164865 8 72.60688654323647 10.623462319021327 11.047493792587385 5.722157345154817 9 67.11601909275406 7.086087459325858 11.335472386934388 14.462421060985703 10 39.87823267309894 23.872745206970443 20.319497511366084 15.92952460856453 11 29.38288681534223 23.317195950159295 26.537114091676965 20.76280314282151 12 28.458861010646135 20.639221777530867 30.39081189555674 20.511105316266256 13 21.246924638042653 25.18565549143434 34.68894910488543 18.87847076563758 14 18.500924025804697 29.560889332320496 27.793335676466253 24.144850965408555 15 15.308216460130838 25.0031178784821 40.33741114046326 19.3512545209238 16 17.390959286175896 26.643688847065228 30.94749492636138 25.017856940397504 17 18.267366583145318 24.314917064432375 30.928220768472016 26.489495583950294 18 19.100690468362036 26.690173580798405 32.08467024183399 22.124465709005566 19 20.208387660003854 28.272922075713424 27.833017766238477 23.68567249804424 20 21.964603575923174 26.686772258817925 32.03478418612034 19.313839979138557 21 20.009977211142733 30.98604324214011 29.71735014342241 19.286629403294747 22 19.0916202764141 24.303579324497456 28.38403192707566 28.220768472012793 23 18.10637067606943 29.69127334157209 29.47812383079557 22.724232151562905 24 21.890908266346187 23.158467591070394 28.67881316538361 26.271810977199806 25 18.14718653983515 32.218455573066066 27.030305778846042 22.60405210825274 26 19.362592260858722 25.911270847269307 29.071098967131892 25.655037924740082 27 20.779809752723892 28.51554971032074 27.752519812700537 22.952120724254826 28 17.167605809457942 25.39880500221086 32.72752009614403 24.706069092187164 29 23.025816033831816 23.60177322252582 28.899899094114577 24.472511649527785 30 18.826317161936938 27.751386038707043 32.41233092595322 21.0099658734028 31 22.678881191823223 25.433951996009114 25.411276516139274 26.475890296028386 32 23.368215779866443 30.70940238772803 24.605163206766363 21.317218625639164 33 19.68118275303001 27.367036654913207 24.84212197140622 28.109658620650556 34 23.189079488894684 24.489518259430167 28.828471332524575 23.492930919150577 35 18.13131370392626 24.407886531898733 28.198092992142946 29.262706772032065 36 23.073434541558484 23.61084341447376 26.749129828459996 26.56659221550776 37 17.702747134386232 27.724175462863233 32.47695604358227 22.096121359168265 38 17.269645468872234 28.808063400641714 25.270688540946246 28.6516025895398 39 19.905670003741456 27.47814650627544 30.022335347671795 22.593848142311312 40 20.228795591886715 25.564336005260714 30.09489688325529 24.111971519597283 41 17.33086926452081 24.662985680434463 29.14366050271539 28.862484552329338 42 19.126767270212355 21.888640718359202 30.965635310257255 28.018956701171188 43 21.54170587635061 23.835330665185204 26.373850636614097 28.24911282185009 44 20.54511853607102 24.05755036790966 28.33187832337502 27.0654527726443 45 18.9328919173252 24.096098683688393 27.555243137832903 29.415766261153504 46 23.83873198716568 26.616478271221418 26.487228035963312 23.057561705649597 47 17.573496899128127 22.393170145463202 35.41229691273342 24.621036042675254 48 20.49296493237038 23.486128275189625 28.728699221097266 27.29220757134273 49 18.037210462466412 21.740116325211734 33.809140485935536 26.413532726386325 50 19.065543474563782 21.983877733812545 32.34657203433068 26.604006757293003 51 18.715207310574712 21.870500334463326 28.36022267321232 31.05406968174964 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 60.0 1 119.0 2 178.0 3 320.0 4 462.0 5 351.0 6 240.0 7 211.0 8 182.0 9 198.5 10 215.0 11 199.0 12 183.0 13 191.5 14 200.0 15 192.0 16 184.0 17 170.0 18 156.0 19 182.5 20 209.0 21 241.5 22 274.0 23 331.0 24 388.0 25 453.0 26 683.5 27 849.0 28 956.0 29 1063.0 30 1231.5 31 1400.0 32 1691.0 33 1982.0 34 2355.0 35 2728.0 36 2917.5 37 3107.0 38 3221.0 39 3335.0 40 3712.0 41 4089.0 42 4822.5 43 5556.0 44 6325.0 45 7094.0 46 9800.0 47 12506.0 48 10588.0 49 8670.0 50 8289.5 51 7909.0 52 6748.0 53 5587.0 54 4841.0 55 4095.0 56 3658.5 57 3222.0 58 3100.5 59 2979.0 60 2780.5 61 2582.0 62 2289.5 63 1997.0 64 1718.0 65 1439.0 66 1177.5 67 916.0 68 810.5 69 705.0 70 569.5 71 434.0 72 352.0 73 270.0 74 191.0 75 92.5 76 73.0 77 47.5 78 22.0 79 17.5 80 13.0 81 10.0 82 7.0 83 6.0 84 5.0 85 4.0 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 88201.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.42914479427671 #Duplication Level Percentage of deduplicated Percentage of total 1 74.0349106589903 36.594823187945714 2 9.402023074982225 9.294679198648542 3 4.699864669587357 6.969308737996167 4 3.082780925293025 6.09516898901373 5 2.257036034589536 5.578168047981316 6 1.7478266853223845 5.183614698246052 7 1.2409110718627427 4.293602113354724 8 0.9931876046516961 3.9273931134567635 9 0.6674771199853201 2.9693540889559076 >10 1.8212262311626946 12.071291708710785 >50 0.020643622267587217 0.7335517737894128 >100 0.0252310938826066 2.4795637237673045 >500 0.002293735807509691 1.1247038015442001 >1k 0.004587471615019382 2.684776816589381 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCG 1258 1.4262876838131087 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGC 1110 1.2584891327762724 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTC 992 1.1247038015442001 No Hit GCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 281 0.3185904921712906 TruSeq Adapter, Index 20 (95% over 21bp) GAATGAAACCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCG 256 0.2902461423339871 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCT 225 0.2550991485357309 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTC 217 0.24602895658779378 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 215 0.2437614086008095 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGC 212 0.2403600866203331 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTT 195 0.22108592873096677 No Hit GAACTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCT 175 0.19841044886112405 No Hit GAATCTATCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTC 153 0.17346742100429702 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 144 0.16326345506286777 No Hit CCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 114 0.12925023525810364 TruSeq Adapter, Index 20 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGCT 92 0.10430720740127664 TruSeq Adapter, Index 22 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTT 91 0.1031734334077845 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0011337739934921373 0.0 0.0 0.22335347671795105 0.0 2 0.0011337739934921373 0.0 0.0 1.287967256607068 0.0 3 0.0011337739934921373 0.0 0.0 1.575945850954071 0.0 4 0.0011337739934921373 0.0 0.0 2.2085917393226833 0.0 5 0.0011337739934921373 0.0 0.0 5.104250518701602 0.0 6 0.0011337739934921373 0.0 0.0 5.789050010770853 0.0 7 0.0011337739934921373 0.0 0.0 6.773165837122028 0.0 8 0.0011337739934921373 0.0 0.0 8.141631047267039 0.0 9 0.0011337739934921373 0.0 0.0 8.50330495119103 0.0 10 0.0011337739934921373 0.0 0.0 12.050883776827927 0.0 11 0.0011337739934921373 0.0 0.0 13.395539733109603 0.0 12 0.0011337739934921373 0.0 0.0 16.817269645468873 0.0 13 0.0011337739934921373 0.0 0.0 17.35581229237764 0.0 14 0.0011337739934921373 0.0 0.0 17.624516728835275 0.0 15 0.0011337739934921373 0.0 0.0 18.165326923731023 0.0 16 0.0011337739934921373 0.0 0.0 18.96010249316901 0.0 17 0.0011337739934921373 0.0 0.0 19.807031666307637 0.0 18 0.0011337739934921373 0.0 0.0 20.632419133569915 0.0 19 0.0011337739934921373 0.0 0.0 21.172095554472172 0.0 20 0.0011337739934921373 0.0 0.0 21.690230269498077 0.0 21 0.0011337739934921373 0.0 0.0 22.367093343612883 0.0 22 0.0011337739934921373 0.0 0.0 23.055294157662612 0.0 23 0.0011337739934921373 0.0 0.0 23.710615525901066 0.0 24 0.0011337739934921373 0.0 0.0 24.255960816770784 0.0 25 0.0011337739934921373 0.0 0.0 24.743483633972403 0.0 26 0.0011337739934921373 0.0 0.0 25.167515107538463 0.0 27 0.0011337739934921373 0.0 0.0 25.56206845727373 0.0 28 0.0011337739934921373 0.0 0.0 26.01444428067709 0.0 29 0.0011337739934921373 0.0 0.0 26.486094261969818 0.0 30 0.0011337739934921373 0.0 0.0 26.966814435210484 0.0 31 0.0011337739934921373 0.0 0.0 27.480414054262422 0.0 32 0.0011337739934921373 0.0 0.0 27.932789877665787 0.0 33 0.0011337739934921373 0.0 0.0 28.35001870727089 0.0 34 0.0011337739934921373 0.0 0.0 28.74230450901917 0.0 35 0.0011337739934921373 0.0 0.0 29.216222038298884 0.0 36 0.0011337739934921373 0.0 0.0 29.619845579982087 0.0 37 0.0011337739934921373 0.0 0.0 30.06768630741148 0.0 38 0.0011337739934921373 0.0 0.0 30.476978719062142 0.0 39 0.0011337739934921373 0.0 0.0 30.884003582725818 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTAA 20 6.99788E-4 45.000004 25 CTCACTA 20 6.99788E-4 45.000004 45 CCTTAAT 20 6.99788E-4 45.000004 23 ATCTATT 20 6.99788E-4 45.000004 15 CTCGTCC 20 6.99788E-4 45.000004 37 TCACCAT 20 6.99788E-4 45.000004 32 CATTGGG 35 1.1949487E-7 45.000004 3 GCTATCT 20 6.99788E-4 45.000004 4 GACCGAT 35 1.1949487E-7 45.000004 9 CATCTAG 20 6.99788E-4 45.000004 39 AGGCGAT 20 6.99788E-4 45.000004 7 ATCGTTG 20 6.99788E-4 45.000004 23 TAGTTGA 20 6.99788E-4 45.000004 11 ACTAGAG 20 6.99788E-4 45.000004 2 CTAGTTG 20 6.99788E-4 45.000004 10 AAGCATG 20 6.99788E-4 45.000004 1 CGGGCTC 20 6.99788E-4 45.000004 6 ACTAATC 20 6.99788E-4 45.000004 10 CGTACAT 20 6.99788E-4 45.000004 35 TCGTACA 20 6.99788E-4 45.000004 34 >>END_MODULE