SRR2936318.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936318.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	183127
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	692	0.3778798320291382	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	201	0.10975989340730749	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGC	187	0.10211492570729602	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCGAA	20	7.017741E-4	45.000004	11
ACCGCTT	20	7.017741E-4	45.000004	45
TTTCGCA	20	7.017741E-4	45.000004	13
TGGGTAC	20	7.017741E-4	45.000004	6
CGCATCA	20	7.017741E-4	45.000004	26
TCTAGAC	20	7.017741E-4	45.000004	28
AGAACGC	20	7.017741E-4	45.000004	34
CTAGTCC	20	7.017741E-4	45.000004	38
TCCACCG	20	7.017741E-4	45.000004	42
AACGATG	20	7.017741E-4	45.000004	1
GTACGGG	20	7.017741E-4	45.000004	3
ACGATGG	25	3.8779268E-5	45.0	2
AAGGTAT	40	3.437035E-7	39.375004	6
AGGTATG	35	6.219563E-6	38.571426	7
TACGGCT	35	6.219563E-6	38.571426	7
TACGAAA	70	0.0	38.571426	20
CATACGA	70	0.0	38.571426	18
ATACGAA	70	0.0	38.571426	19
ACATACG	70	0.0	38.571426	17
TAGTAAG	35	6.219563E-6	38.571426	2