##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936316.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 131259 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01711882613763 33.0 31.0 34.0 30.0 34.0 2 32.137834358024975 33.0 31.0 34.0 30.0 34.0 3 31.981540313426127 33.0 31.0 34.0 30.0 34.0 4 35.76736833283813 37.0 35.0 37.0 35.0 37.0 5 35.857053611561874 37.0 35.0 37.0 35.0 37.0 6 35.838418698908264 37.0 35.0 37.0 35.0 37.0 7 26.9283477704386 36.0 11.0 37.0 0.0 37.0 8 31.21733366854844 36.0 19.0 37.0 17.0 37.0 9 35.98196695083766 39.0 32.0 39.0 32.0 39.0 10 36.71211878804501 38.0 35.0 39.0 33.0 39.0 11 37.08012402959035 39.0 37.0 39.0 34.0 39.0 12 37.1136760145971 39.0 37.0 39.0 34.0 39.0 13 37.047829101242584 39.0 37.0 39.0 33.0 39.0 14 38.23219741122514 40.0 37.0 41.0 34.0 41.0 15 38.31752489353111 40.0 37.0 41.0 34.0 41.0 16 38.28380530096984 40.0 37.0 41.0 34.0 41.0 17 38.14677088809148 40.0 37.0 41.0 33.0 41.0 18 38.045284513823816 40.0 37.0 41.0 33.0 41.0 19 37.934358786826046 40.0 37.0 41.0 33.0 41.0 20 37.97377703624132 40.0 36.0 41.0 34.0 41.0 21 37.93356646020463 40.0 36.0 41.0 33.0 41.0 22 37.942838205380205 40.0 36.0 41.0 33.0 41.0 23 37.88013774293572 40.0 36.0 41.0 33.0 41.0 24 37.82556624688593 40.0 36.0 41.0 33.0 41.0 25 37.76038214522433 40.0 36.0 41.0 33.0 41.0 26 37.610297198668285 40.0 36.0 41.0 33.0 41.0 27 37.47726251152302 39.0 35.0 41.0 33.0 41.0 28 37.44097547596736 39.0 36.0 41.0 33.0 41.0 29 37.43775283980527 39.0 36.0 41.0 33.0 41.0 30 37.333272385131686 39.0 36.0 41.0 32.0 41.0 31 37.22867003405481 39.0 35.0 41.0 32.0 41.0 32 37.09536869852734 39.0 35.0 41.0 32.0 41.0 33 36.96038366892937 39.0 35.0 41.0 31.0 41.0 34 36.78109691525914 39.0 35.0 41.0 31.0 41.0 35 36.684600675001334 39.0 35.0 41.0 30.0 41.0 36 36.449454894521516 39.0 35.0 41.0 30.0 41.0 37 36.37045840666164 39.0 35.0 41.0 30.0 41.0 38 36.21558902627629 39.0 35.0 41.0 30.0 41.0 39 36.12901210583655 39.0 35.0 40.0 29.0 41.0 40 35.866340593787854 39.0 35.0 40.0 28.0 41.0 41 35.760321197022684 38.0 35.0 40.0 28.0 41.0 42 35.68549966097563 38.0 35.0 40.0 27.0 41.0 43 35.618502350315026 38.0 35.0 40.0 27.0 41.0 44 35.39962212114979 38.0 34.0 40.0 26.0 41.0 45 35.2942350619767 38.0 34.0 40.0 26.0 41.0 46 35.148363159859514 38.0 34.0 40.0 25.0 41.0 47 34.970211566444966 38.0 34.0 40.0 24.0 41.0 48 34.85769356767917 38.0 34.0 40.0 24.0 41.0 49 34.70549067111588 38.0 34.0 40.0 24.0 41.0 50 34.471457195316134 37.0 34.0 40.0 23.0 41.0 51 32.313380415819104 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 14.0 11 10.0 12 7.0 13 1.0 14 3.0 15 11.0 16 11.0 17 35.0 18 48.0 19 79.0 20 167.0 21 275.0 22 369.0 23 554.0 24 816.0 25 1161.0 26 1400.0 27 1721.0 28 1951.0 29 2230.0 30 2571.0 31 3243.0 32 4292.0 33 6041.0 34 9350.0 35 11650.0 36 12484.0 37 19346.0 38 24755.0 39 26653.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.886514448533056 19.920157855842266 24.029590351899678 12.163737343725002 2 32.5760519278678 25.357499295286416 24.98876267532131 17.077686101524467 3 32.31702207086752 24.98876267532131 26.52084809422592 16.173367159585247 4 28.880305350490254 25.20208138108625 26.875871368820427 19.041741899603075 5 26.002788380225354 29.648252691244032 25.21198546385391 19.136973464676707 6 26.232105988922665 34.90655878834975 25.115230193739098 13.74610502898849 7 60.57489391203651 27.859422972900905 7.242931913240234 4.322751201822352 8 81.24776205822077 6.3576592843157425 8.359045855903215 4.035532801560274 9 75.08208960909347 8.579221234353454 10.069404764625665 6.269284391927411 10 41.14460722693301 28.20758957481011 17.120349842677456 13.527453355579427 11 32.940979285229965 26.666361925658432 23.325638622875385 17.06702016623622 12 31.88581354421411 23.127556967522228 26.525419209349455 18.46121027891421 13 25.338452982271694 25.62719508757495 28.734029666537154 20.30032226361621 14 20.493832803845834 29.397603211970225 27.685720598206597 22.42284338597734 15 20.26832445775147 26.929962897782247 33.16039281115962 19.64131983330667 16 23.423917598031373 25.672906238810288 31.021872785866112 19.881303377292223 17 23.0528954205045 25.484728666224793 28.09407354924234 23.36830236402837 18 23.421632040469607 27.192040164864885 28.142070258039446 21.24425753662606 19 25.921270160522326 27.969891588386318 25.841275645860474 20.26756260523088 20 27.01757593764999 26.920820667535178 27.00081518219703 19.0607882126178 21 24.902673340494747 27.805331443939078 27.2118483304002 20.08014688516597 22 24.027304794337912 25.570056148530767 27.070905614091224 23.331733443040097 23 23.686756717634598 27.592774590694734 27.436594823973977 21.28387386769669 24 22.627019861495214 26.018787283157724 29.684821612232305 21.669371243114757 25 22.662826929962897 28.079598351351144 26.881966188985135 22.375608529700823 26 21.909354787100312 28.725649288810672 27.218705003085503 22.146290921003512 27 22.892144538660204 28.86659200511965 27.02595631537647 21.215307140843677 28 20.346033414851554 29.623873410585176 29.090576646172835 20.939516528390435 29 22.251426568844803 27.766476965389042 27.998841984168703 21.983254481597452 30 23.41706092534607 26.862158023449823 28.32796227306318 21.392818778140928 31 24.22691015473225 27.412977395835714 26.390571313205193 21.96954113622685 32 24.57279119907968 28.68679481026063 26.059165466748947 20.681248523910742 33 24.43718145041483 27.406120723150412 25.106849816012616 23.049848010422142 34 22.280376964627187 27.413739248356308 28.532138748581048 21.77374503843546 35 23.50695952277558 25.87098789416345 27.092999337188306 23.529053245872664 36 23.324114917834205 29.352653913255473 26.553607752611246 20.769623416299073 37 23.05899024066921 29.073054038199288 26.74864199788205 21.11931372324945 38 22.59578390815106 28.379006391942646 25.243221417198058 23.781988282708234 39 23.494769882446157 26.076688074722494 27.115854912805982 23.31268713002537 40 24.879817764877075 25.32473963690109 28.617466230887022 21.17797636733481 41 21.17111969464951 26.93605771794696 28.186257704233615 23.706564883169918 42 23.007184269269153 26.532275882034757 27.348981784106236 23.111558064589858 43 23.17402997127816 26.551322195049483 26.550560342528897 23.724087491143464 44 21.883451801400287 27.80609329645967 26.635125972314277 23.675328929825763 45 22.515789393489207 26.354764244737506 26.376096115313995 24.75335024645929 46 23.430012418196085 27.809140706542028 25.80242116731043 22.958425707951456 47 22.714632901362954 26.606175576531893 28.666224792204726 22.012966729900427 48 22.444937109074424 26.20087003557851 27.93179896235687 23.422393892990197 49 22.341325166274313 26.158206294425522 28.279965564266067 23.220502975034094 50 20.400124943813378 26.442377284605247 28.471190546933922 24.686307224647454 51 21.090363327467067 25.435208252386506 27.02595631537647 26.44847210476996 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 48.0 1 177.5 2 307.0 3 640.5 4 974.0 5 700.0 6 426.0 7 391.5 8 357.0 9 351.0 10 345.0 11 349.5 12 354.0 13 362.0 14 370.0 15 402.5 16 435.0 17 424.5 18 414.0 19 421.5 20 429.0 21 535.0 22 641.0 23 636.0 24 631.0 25 790.0 26 1183.5 27 1418.0 28 1722.5 29 2027.0 30 2330.5 31 2634.0 32 2920.0 33 3206.0 34 3525.0 35 3844.0 36 4175.0 37 4506.0 38 4816.0 39 5126.0 40 5757.5 41 6389.0 42 6943.5 43 7498.0 44 8088.0 45 8678.0 46 8810.5 47 8943.0 48 9855.5 49 10768.0 50 10266.0 51 9764.0 52 9273.5 53 8783.0 54 8091.0 55 7399.0 56 7001.5 57 6604.0 58 6493.0 59 6382.0 60 6145.0 61 5908.0 62 5315.0 63 4722.0 64 4064.0 65 3406.0 66 2824.0 67 2242.0 68 1848.5 69 1455.0 70 1236.0 71 1017.0 72 878.0 73 739.0 74 630.0 75 392.0 76 263.0 77 205.5 78 148.0 79 123.5 80 99.0 81 79.0 82 59.0 83 36.0 84 13.0 85 11.5 86 10.0 87 5.5 88 1.0 89 2.0 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 131259.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.94261726814923 #Duplication Level Percentage of deduplicated Percentage of total 1 71.47261199129177 34.26584081853435 2 9.294601852881819 8.912150785850875 3 5.16296143272577 7.42577651818161 4 3.586581703189309 6.878004555878073 5 2.5536715981502964 6.121485002933133 6 1.822689062276534 5.243069046693941 7 1.4969251060719222 5.02365552076429 8 1.1663938724594385 4.473598000898986 9 0.8708226731713519 3.7574566315452653 >10 2.5361915809880977 15.883863201761402 >50 0.025425479508652607 0.7991832940979284 >100 0.011123647285035516 1.2159166228601466 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 462 0.35197586451214774 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGC 266 0.2026527704766911 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCG 234 0.17827348981784105 No Hit GAATCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTC 212 0.16151273436488164 TruSeq Adapter, Index 22 (95% over 21bp) GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 153 0.11656343565012685 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 140 0.10665935288246903 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06856672685301579 0.0 2 0.0 0.0 0.0 0.37711699769158685 0.0 3 0.0 0.0 0.0 0.5066319261917278 0.0 4 0.0 0.0 0.0 0.7412825025331596 0.0 5 0.0 0.0 0.0 1.4726609222986615 0.0 6 0.0 0.0 0.0 1.8398738372225905 0.0 7 0.0 0.0 0.0 2.1948971118170943 0.0 8 0.0 0.0 0.0 2.8927540206766773 0.0 9 0.0 0.0 0.0 3.1304520071004656 0.0 10 0.0 0.0 0.0 4.0538172620544115 0.0 11 0.0 0.0 0.0 4.914710610320054 0.0 12 0.0 0.0 0.0 5.9020714770034814 0.0 13 0.0 0.0 0.0 6.196146549950861 0.0 14 0.0 0.0 0.0 6.322614068368646 0.0 15 0.0 0.0 0.0 6.560312054792433 0.0 16 0.0 0.0 0.0 7.018185419666461 0.0 17 0.0 0.0 0.0 7.5522440365993955 0.0 18 0.0 0.0 0.0 8.11906231191766 0.0 19 0.0 0.0 0.0 8.467228913826862 0.0 20 0.0 0.0 0.0 8.822252188421366 0.0 21 0.0 0.0 0.0 9.3075522440366 0.0 22 0.0 0.0 0.0 9.776853396719464 0.0 23 0.0 0.0 0.0 10.24310713931997 0.0 24 0.0 0.0 0.0 10.61870043197038 0.0 25 0.0 0.0 0.0 10.976771116647239 0.0 26 0.0 0.0 0.0 11.278464714800508 0.0 27 0.0 0.0 0.0 11.604537593612628 0.0 28 0.0 0.0 0.0 11.954989753083598 0.0 29 0.0 0.0 0.0 12.323726373048705 0.0 30 0.0 0.0 0.0 12.764077129949184 0.0 31 0.0 0.0 0.0 13.147288947805484 0.0 32 0.0 0.0 0.0 13.529738913141195 0.0 33 0.0 0.0 0.0 13.868001432282739 0.0 34 0.0 0.0 0.0 14.229881379562544 0.0 35 0.0 0.0 0.0 14.600141704568829 0.0 36 0.0 0.0 0.0 14.978020554781006 0.0 37 0.0 0.0 0.0 15.364279782719661 0.0 38 0.0 0.0 0.0 15.708637122025918 0.0 39 0.0 0.0 0.0 16.12232304070578 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGTC 20 7.0104457E-4 45.0 12 AGGTACC 20 7.0104457E-4 45.0 7 CAACGGG 20 7.0104457E-4 45.0 3 CGTGCGG 20 7.0104457E-4 45.0 2 GGCCGAT 20 7.0104457E-4 45.0 8 CCTCGAT 20 7.0104457E-4 45.0 15 TAGCCGG 20 7.0104457E-4 45.0 2 GTCAAGC 20 7.0104457E-4 45.0 16 TAGGGCG 25 3.8718856E-5 45.0 5 ATGGTCA 25 3.8718856E-5 45.0 13 TAGGCGA 25 3.8718856E-5 45.0 6 GGCGATT 20 7.0104457E-4 45.0 8 CTGGGAC 25 3.8718856E-5 45.0 5 CTAGGAC 20 7.0104457E-4 45.0 5 TCACGTC 25 3.8718856E-5 45.0 39 TCCGGGT 20 7.0104457E-4 45.0 17 CGTTTTA 55 6.002665E-11 40.909092 1 AGGCGAT 50 1.0659278E-9 40.5 7 ATCTATC 45 1.9059371E-8 40.000004 3 GGCGATG 90 0.0 40.000004 8 >>END_MODULE