SRR2936315.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936315.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	85588
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCG	616	0.7197270645417582	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGC	566	0.6613076599523298	No Hit
GAATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC	498	0.5818572697107071	No Hit
GCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC	244	0.2850866943964107	TruSeq Adapter, Index 15 (95% over 22bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	220	0.2570453801934851	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCT	153	0.17876337804365097	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCG	127	0.1483852876571482	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGC	122	0.14254334719820536	No Hit
CCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC	108	0.12618591391316542	TruSeq Adapter, Index 15 (95% over 22bp)
GAATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTT	105	0.1226807496377997	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	100	0.11683880917885685	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTC	92	0.1074917044445483	No Hit
GAATCTATCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC	88	0.10281815207739402	No Hit
CTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT	87	0.10164976398560545	TruSeq Adapter, Index 21 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTATC	30	2.1419437E-6	45.000004	3
CGAAAGG	30	2.1419437E-6	45.000004	3
GGGGTAG	30	2.1419437E-6	45.000004	7
CAAAAAG	20	6.996695E-4	45.0	29
ACCTGGG	20	6.996695E-4	45.0	2
TACGGGC	20	6.996695E-4	45.0	4
GTTACGG	20	6.996695E-4	45.0	2
GCGGGAT	40	6.688424E-9	45.0	5
TTACGGG	35	1.1943848E-7	45.0	3
GCTACAC	20	6.996695E-4	45.0	9
GGATTGA	20	6.996695E-4	45.0	8
ATTGCGG	20	6.996695E-4	45.0	2
CCAGTGG	20	6.996695E-4	45.0	2
AGGGAGC	25	3.8605078E-5	45.0	6
CTATCTC	55	6.002665E-11	40.90909	5
CGGGGGA	50	1.0568328E-9	40.5	6
AGGGGCC	45	1.8926585E-8	40.000004	6
ATGGGAC	40	3.4084587E-7	39.375	5
ATGAAAC	70	0.0	38.571426	3
GGTAGGG	35	6.1807623E-6	38.571426	3