SRR2936311.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936311.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	115939
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG	725	0.6253288367158591	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC	693	0.5977281156470213	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC	462	0.3984854104313475	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	326	0.2811823458887864	No Hit
GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	249	0.2147681108168951	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG	211	0.18199225454765006	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCT	173	0.14921639827840502	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	172	0.14835387574500383	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC	169	0.14576630814480027	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTT	125	0.10781531667514814	No Hit
CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	122	0.10522774907494457	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGGCAT	20	7.007033E-4	45.000004	39
TTGGCAA	20	7.007033E-4	45.000004	13
CACGGGA	20	7.007033E-4	45.000004	4
TGAAACG	20	7.007033E-4	45.000004	4
TTGACGG	20	7.007033E-4	45.000004	2
CTTGAAG	25	3.8690614E-5	45.000004	2
TATCCAC	20	7.007033E-4	45.000004	39
GTAGGGC	60	3.6379788E-12	41.250004	4
AACTTTG	55	6.002665E-11	40.909092	27
CTATCTC	50	1.0641088E-9	40.500004	5
GTTGTAA	40	3.422483E-7	39.375004	1
TAGGGCG	40	3.422483E-7	39.375004	5
GGCGATA	40	3.422483E-7	39.375004	8
GCAAGCG	75	0.0	39.0	40
CGCGGGT	35	6.1998107E-6	38.571426	4
ATGTCTC	35	6.1998107E-6	38.571426	7
AAGCGCA	70	0.0	38.571426	42
GACCGAT	65	9.094947E-12	38.076927	9
GGGCTCC	30	1.13360045E-4	37.500004	7
ATAGGCT	30	1.13360045E-4	37.500004	5