SRR2936298.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936298.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	299147
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC	620	0.20725596445894495	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	405	0.13538494452560113	No Hit
CTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGCT	358	0.11967360528435853	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGACT	20	7.024909E-4	45.000004	27
GTTGACG	20	7.024909E-4	45.000004	1
CGGGTAT	20	7.024909E-4	45.000004	6
TCGTTGT	20	7.024909E-4	45.000004	20
GTATTAG	45	3.8198777E-10	45.000004	1
CATGCGG	20	7.024909E-4	45.000004	2
CGTGCGG	20	7.024909E-4	45.000004	2
CGCGCAT	20	7.024909E-4	45.000004	45
CTAACGG	20	7.024909E-4	45.000004	2
CAGATCG	20	7.024909E-4	45.000004	14
TATAGCG	20	7.024909E-4	45.000004	1
CGTAAAG	20	7.024909E-4	45.000004	2
GCCAGTA	20	7.024909E-4	45.000004	25
ATCGGGT	20	7.024909E-4	45.000004	4
ATTGCCC	20	7.024909E-4	45.000004	13
CTCTCGC	20	7.024909E-4	45.000004	11
CCACGGA	20	7.024909E-4	45.000004	13
GTCCTGC	35	1.2078999E-7	45.0	14
CGGTTTT	55	1.8189894E-12	45.0	1
AATGGTC	35	1.2078999E-7	45.0	10