##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936296.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 556515 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.901240757212296 31.0 31.0 34.0 30.0 34.0 2 32.03626676729289 33.0 31.0 34.0 30.0 34.0 3 31.981420087508873 33.0 31.0 34.0 30.0 34.0 4 35.70882545843329 37.0 35.0 37.0 35.0 37.0 5 31.18530318140571 37.0 35.0 37.0 0.0 37.0 6 33.39482673422999 37.0 35.0 37.0 17.0 37.0 7 29.518697609228862 35.0 32.0 37.0 0.0 37.0 8 32.54274008786825 35.0 33.0 37.0 17.0 37.0 9 36.417972561386485 39.0 35.0 39.0 32.0 39.0 10 36.795178925994804 38.0 35.0 39.0 33.0 39.0 11 36.925495269669284 39.0 37.0 39.0 33.0 39.0 12 36.96307556849321 39.0 37.0 39.0 33.0 39.0 13 36.77830965921853 39.0 37.0 39.0 33.0 39.0 14 38.04756924790886 40.0 37.0 41.0 33.0 41.0 15 38.13996208547838 40.0 37.0 41.0 33.0 41.0 16 38.17207802125729 40.0 37.0 41.0 33.0 41.0 17 38.120607710483995 40.0 37.0 41.0 33.0 41.0 18 38.034153616703954 40.0 37.0 41.0 33.0 41.0 19 37.94892141272023 40.0 37.0 41.0 33.0 41.0 20 37.89073430186069 40.0 36.0 41.0 33.0 41.0 21 37.81247944799332 40.0 36.0 41.0 33.0 41.0 22 37.806732972157086 40.0 36.0 41.0 33.0 41.0 23 37.75575141730232 40.0 36.0 41.0 33.0 41.0 24 37.68594557199716 40.0 36.0 41.0 33.0 41.0 25 37.559718965346846 39.0 36.0 41.0 33.0 41.0 26 37.37545259337125 39.0 36.0 41.0 32.0 41.0 27 37.324738776133614 39.0 36.0 41.0 32.0 41.0 28 37.226753995849165 39.0 36.0 41.0 32.0 41.0 29 37.1864028822224 39.0 36.0 41.0 32.0 41.0 30 37.05177218942886 39.0 35.0 41.0 31.0 41.0 31 36.92736404229895 39.0 35.0 41.0 31.0 41.0 32 36.830712559409896 39.0 35.0 41.0 31.0 41.0 33 36.67791703727662 39.0 35.0 41.0 30.0 41.0 34 36.54278141649372 39.0 35.0 41.0 30.0 41.0 35 36.46263263344205 39.0 35.0 41.0 30.0 41.0 36 36.35021877218045 39.0 35.0 40.0 30.0 41.0 37 36.26941052801811 39.0 35.0 40.0 30.0 41.0 38 36.158565357627374 39.0 35.0 40.0 29.0 41.0 39 36.104182277207265 39.0 35.0 40.0 29.0 41.0 40 35.9521055137777 39.0 35.0 40.0 29.0 41.0 41 35.86527586857497 38.0 35.0 40.0 28.0 41.0 42 35.820633765487 38.0 35.0 40.0 28.0 41.0 43 35.6540129196877 38.0 35.0 40.0 27.0 41.0 44 35.38262760213112 38.0 34.0 40.0 26.0 41.0 45 35.279282678813686 38.0 34.0 40.0 26.0 41.0 46 35.153131541827264 38.0 34.0 40.0 25.0 41.0 47 34.99874756295877 38.0 34.0 40.0 25.0 41.0 48 34.932806842582856 38.0 34.0 40.0 24.0 41.0 49 34.76869087086602 38.0 34.0 40.0 24.0 41.0 50 34.59620675094112 37.0 33.0 40.0 24.0 41.0 51 32.5579508189357 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 10.0 9 18.0 10 36.0 11 30.0 12 20.0 13 23.0 14 24.0 15 34.0 16 96.0 17 147.0 18 258.0 19 480.0 20 800.0 21 1305.0 22 1874.0 23 2519.0 24 3390.0 25 4612.0 26 5933.0 27 6819.0 28 8310.0 29 9843.0 30 12330.0 31 15611.0 32 19838.0 33 27610.0 34 39430.0 35 47864.0 36 56221.0 37 86697.0 38 105503.0 39 98817.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.13738174173203 20.34716045389612 24.67588474704186 11.839573057329991 2 30.961249921385768 26.233434858000233 25.29599381867515 17.509321401938852 3 31.836877712191047 25.093124174550553 26.51842268402469 16.551575429233715 4 27.865915563821282 26.520039891108055 26.65929938995355 18.954745155117113 5 21.84289731633469 39.601627988463925 20.958464731408856 17.59700996379253 6 25.379908897334303 35.93056790922077 24.249481146060752 14.440042047384166 7 69.29444848746216 19.6257064050385 6.784004025048741 4.2958410824506075 8 83.07377159645293 5.839375398686468 7.068812161397267 4.018040843463338 9 76.87591529428677 7.90454884414616 8.841810193795316 6.377725667771758 10 41.50238538044796 27.33511226112504 16.196868008948545 14.965634349478451 11 30.913632157264402 27.28533822089252 23.118154946407554 18.682874675435524 12 29.71510201881351 23.515089440536194 27.13853175565798 19.63127678499232 13 24.2830831154596 24.739494892320963 29.050070528197804 21.927351464021637 14 19.776466043143493 28.913146995139392 28.32735865160867 22.98302831010844 15 19.82480256596857 26.16407464309138 33.15346396772774 20.857658823212315 16 22.546202707923417 25.427886040807522 30.869069117633845 21.156842133635212 17 21.934359361382892 25.422135971177777 28.45206328670386 24.19144138073547 18 22.94655130589472 26.624259903147262 28.803895672174157 21.625293118783862 19 25.03975634079944 27.664663126780052 25.918079476743667 21.377501055676845 20 26.67511208143536 25.90442306137301 27.455684033673844 19.964780823517785 21 25.663818585303183 27.32433088056926 26.274404104112197 20.737446430015364 22 23.8106789574405 24.857910388758615 26.530641581987908 24.80076907181298 23 23.93089135063745 26.4803284727276 27.543192905851594 22.045587270783358 24 24.048228709019522 24.48990593245465 28.06159762090869 23.400267737617135 25 22.670727653342677 26.896489762180714 26.79029316370628 23.642489420770328 26 22.247199087176448 28.23751381364384 26.26613837901943 23.249148720160285 27 23.05957611205448 27.75378920604117 26.637916318517917 22.548718363386435 28 20.97355866418695 28.1967242572078 27.833032353126153 22.996684725479096 29 22.534343189312057 27.1834541746404 27.80266479789404 22.47953783815351 30 22.806213668993646 26.769988230326224 26.76729288518728 23.656505215492842 31 22.885816195430493 27.3027681194577 25.23328212177569 24.57813356333612 32 24.51110931421435 28.554127022631913 25.000044922418986 21.934718740734752 33 23.149600639695247 28.37138262221144 24.100159025363197 24.378857712730113 34 21.295023494425127 27.989002991833107 26.574845242266605 24.14112827147516 35 21.85493652462198 26.493984888098254 26.535852582589868 25.1152260046899 36 21.246507281924117 29.49731813158675 25.385119897936264 23.87105468855287 37 22.232284844074286 28.425469214666272 25.94179851396638 23.400447427293063 38 22.278644780464138 28.294295751237613 25.124030798810455 24.303028669487794 39 22.524460257135924 26.99711598070133 25.93658751336442 24.541836248798326 40 22.539554189914018 25.373260379324908 29.197056683108276 22.890128747652806 41 19.5748542267504 26.83252023754975 28.40857838512888 25.184047150570965 42 21.656918501747484 26.04997169887604 27.72054661599418 24.572563183382297 43 22.27325409018625 25.409737383538626 27.170336828297533 25.14667169797759 44 21.864460077446253 26.503508440922523 26.681940289120686 24.950091192510534 45 21.230514900766376 26.52561027106188 26.481945679810963 25.761929148360778 46 21.51029172618887 27.839321491783693 25.694365830211225 24.956020951816214 47 20.730618222330037 26.65426807902752 28.184864738596442 24.430248960046 48 21.400501334195845 24.98387285158531 28.12394993845629 25.49167587576256 49 20.698813149690483 25.641896444839762 28.54029091758533 25.118999487884423 50 19.453204316146017 26.378264736799544 28.12628590424337 26.042245042811064 51 19.83809960198737 25.287728093582384 27.123437822879886 27.75073448155036 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 286.0 1 590.0 2 894.0 3 1562.5 4 2231.0 5 1738.0 6 1245.0 7 1080.0 8 915.0 9 911.5 10 908.0 11 938.0 12 968.0 13 999.0 14 1030.0 15 1074.0 16 1118.0 17 1185.5 18 1253.0 19 1369.0 20 1485.0 21 1754.0 22 2023.0 23 2272.5 24 2522.0 25 3104.0 26 4463.0 27 5240.0 28 6071.5 29 6903.0 30 8830.0 31 10757.0 32 12135.5 33 13514.0 34 15375.5 35 17237.0 36 18515.5 37 19794.0 38 21180.5 39 22567.0 40 24574.5 41 26582.0 42 28532.0 43 30482.0 44 33926.5 45 37371.0 46 41658.5 47 45946.0 48 46480.5 49 47015.0 50 44934.0 51 42853.0 52 38508.5 53 34164.0 54 31501.5 55 28839.0 56 28561.0 57 28283.0 58 28098.0 59 27913.0 60 27497.5 61 27082.0 62 23847.0 63 20612.0 64 17391.5 65 14171.0 66 11860.0 67 9549.0 68 8122.0 69 6695.0 70 5734.0 71 4773.0 72 3872.5 73 2972.0 74 2507.0 75 1559.5 76 1077.0 77 849.0 78 621.0 79 496.5 80 372.0 81 315.5 82 259.0 83 186.5 84 114.0 85 93.0 86 72.0 87 56.5 88 41.0 89 29.0 90 17.0 91 12.5 92 8.0 93 7.0 94 6.0 95 5.5 96 5.0 97 4.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 556515.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.79222447264551 #Duplication Level Percentage of deduplicated Percentage of total 1 72.73781645228618 26.03448254110315 2 8.702810412021655 6.2298588761991125 3 4.04678863395967 4.345307015401049 4 2.6529941266540598 3.798262452232489 5 1.9451847208739004 3.481124408513946 6 1.3745813064165104 2.951959360509724 7 1.0324819216263672 2.586837729195953 8 0.7877735640947163 2.255693459175527 9 0.6262415274025265 2.0173119590595245 >10 6.000841427662003 42.55160902789933 >50 0.06961304828153292 1.569533713852178 >100 0.02038667842518909 1.3543657514863694 >500 0.0014917081774528601 0.4370988548818033 >1k 9.944721183019068E-4 0.38655485048993354 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCG 1133 0.20358840282831547 No Hit GAATCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTC 1039 0.18669757329092657 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGC 897 0.16118163930891352 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 782 0.14051732657700153 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 777 0.13961887819735316 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.593793518593389E-4 0.0 0.0 0.0812197335202106 0.0 2 3.593793518593389E-4 0.0 0.0 0.3737545259337125 0.0 3 3.593793518593389E-4 0.0 0.0 0.5040295409827228 0.0 4 3.593793518593389E-4 0.0 0.0 0.724688463024357 0.0 5 3.593793518593389E-4 0.0 0.0 1.4978931385497247 0.0 6 3.593793518593389E-4 0.0 0.0 1.949992363188773 0.0 7 3.593793518593389E-4 0.0 0.0 2.3918492762998302 0.0 8 3.593793518593389E-4 0.0 0.0 3.2202186823356063 0.0 9 3.593793518593389E-4 0.0 0.0 3.5567774453518775 0.0 10 3.593793518593389E-4 0.0 0.0 4.543094076529833 0.0 11 3.593793518593389E-4 0.0 0.0 5.342892824092791 0.0 12 3.593793518593389E-4 0.0 0.0 6.193543749943847 0.0 13 3.593793518593389E-4 0.0 0.0 6.487156680412927 0.0 14 3.593793518593389E-4 0.0 0.0 6.611681625832188 0.0 15 3.593793518593389E-4 0.0 0.0 6.837371858799853 0.0 16 3.593793518593389E-4 0.0 0.0 7.288572635059253 0.0 17 3.593793518593389E-4 0.0 0.0 7.76277368983765 0.0 18 3.593793518593389E-4 0.0 0.0 8.30184271762666 0.0 19 3.593793518593389E-4 0.0 0.0 8.624924754948205 0.0 20 3.593793518593389E-4 0.0 0.0 8.952678723843922 0.0 21 3.593793518593389E-4 0.0 0.0 9.382316738991761 0.0 22 3.593793518593389E-4 0.0 0.0 9.832439377195584 0.0 23 3.593793518593389E-4 0.0 0.0 10.289390223084732 0.0 24 3.593793518593389E-4 0.0 0.0 10.646613298832916 0.0 25 3.593793518593389E-4 0.0 0.0 10.97095316388597 0.0 26 3.593793518593389E-4 0.0 0.0 11.271394302040376 0.0 27 3.593793518593389E-4 0.0 0.0 11.56878071570398 0.0 28 3.593793518593389E-4 0.0 0.0 11.885034545340197 0.0 29 3.593793518593389E-4 0.0 0.0 12.218179204513804 0.0 30 3.593793518593389E-4 0.0 0.0 12.587800867901136 0.0 31 3.593793518593389E-4 0.0 0.0 12.943227046890021 0.0 32 3.593793518593389E-4 0.0 0.0 13.29721570847147 0.0 33 3.593793518593389E-4 0.0 0.0 13.611672641348392 0.0 34 3.593793518593389E-4 0.0 0.0 13.941403196679335 0.0 35 3.593793518593389E-4 0.0 0.0 14.289821478306964 0.0 36 5.390690277890084E-4 0.0 0.0 14.658185313962786 0.0 37 5.390690277890084E-4 0.0 0.0 15.01540838971097 0.0 38 5.390690277890084E-4 0.0 0.0 15.351428083699451 0.0 39 5.390690277890084E-4 0.0 0.0 15.688705605419441 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACGGT 25 3.8882026E-5 45.000004 16 GCTACGC 20 7.0301467E-4 45.0 42 CAGTACG 20 7.0301467E-4 45.0 1 TAATGCG 20 7.0301467E-4 45.0 1 ACGGGTA 65 0.0 41.538464 5 AACACGT 60 3.6379788E-12 41.249996 41 ATAACGG 50 1.0786607E-9 40.500004 2 GTATGCG 45 1.9252184E-8 40.0 1 ATTGGGC 130 0.0 39.807693 4 TAACGGG 200 0.0 39.375004 3 TACGGGT 40 3.4539335E-7 39.375 4 GACCGCC 35 6.2424824E-6 38.571426 9 TCTACGG 35 6.2424824E-6 38.571426 2 TGCACGG 155 0.0 37.741936 2 TATGCGG 90 0.0 37.5 2 ACGCGAG 30 1.13916554E-4 37.499996 2 GCGACAA 30 1.13916554E-4 37.499996 18 GTTTCGC 30 1.13916554E-4 37.499996 16 GATATAC 30 1.13916554E-4 37.499996 9 TTGCGAG 60 1.546141E-10 37.499996 1 >>END_MODULE