SRR2936295.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936295.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	336812
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCG	940	0.2790874434402575	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTC	820	0.2434592591712884	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGC	732	0.21733192404071114	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	616	0.18289134591404108	No Hit
AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	474	0.1407313278624277	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	416	0.12351103879909267	No Hit
GAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT	395	0.11727610655202307	No Hit
GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA	394	0.11697920501644835	No Hit
GCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	382	0.11341638658955144	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	380	0.11282258351840196	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	348	0.10332173438001022	No Hit
GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAACT	346	0.10272793130886072	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACGG	35	1.2085002E-7	45.000004	2
CTTGTCA	25	3.8849146E-5	45.0	25
TTTAGCG	25	3.8849146E-5	45.0	1
CGGAATA	20	7.026178E-4	45.0	15
CGGCGAA	20	7.026178E-4	45.0	12
ATTAGCG	25	3.8849146E-5	45.0	1
AGTCACG	20	7.026178E-4	45.0	1
TGCTTCG	20	7.026178E-4	45.0	23
CTATCGA	25	3.8849146E-5	45.0	38
GCGAAGT	20	7.026178E-4	45.0	14
GTTAGCG	25	3.8849146E-5	45.0	1
ATTCGAA	20	7.026178E-4	45.0	8
CGATTCA	20	7.026178E-4	45.0	10
GAATACG	20	7.026178E-4	45.0	1
AGGCGAT	40	6.7902874E-9	45.0	7
TCGATGT	20	7.026178E-4	45.0	21
GGCCCGT	25	3.8849146E-5	45.0	8
TGTTGCG	20	7.026178E-4	45.0	1
GTTACGG	25	3.8849146E-5	45.0	2
CTAGTAG	20	7.026178E-4	45.0	1