SRR2936292.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936292.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	111793
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC	186	0.16637893249130087	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	153	0.13686008962994106	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	125	0.1118137987172721	No Hit
GATTCTGGGGATTGGAAAGTTTTATTCTTTTATTGAACACTTCGGCCATAT	120	0.10734124676858121	No Hit
CTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCT	116	0.1037632052096285	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCTAGC	20	7.0059526E-4	45.0	25
ACTATCA	20	7.0059526E-4	45.0	11
ATCTCAT	20	7.0059526E-4	45.0	15
GGAGCCT	20	7.0059526E-4	45.0	8
CATATCA	20	7.0059526E-4	45.0	29
GTATTGG	20	7.0059526E-4	45.0	2
CTATCTC	45	3.783498E-10	45.0	5
CATGCAT	20	7.0059526E-4	45.0	25
TCTTCTA	20	7.0059526E-4	45.0	23
CAGTTTA	20	7.0059526E-4	45.0	26
TATGGGC	45	3.783498E-10	45.0	4
CGCATGG	20	7.0059526E-4	45.0	2
GCTATGG	40	6.721166E-9	45.0	2
GCTATCT	20	7.0059526E-4	45.0	4
CGCGCAT	20	7.0059526E-4	45.0	43
CAATTTT	25	3.868166E-5	45.0	41
CGACAAT	20	7.0059526E-4	45.0	20
AGGCGAT	45	3.783498E-10	45.0	7
GCGCATT	20	7.0059526E-4	45.0	44
GCGCATG	20	7.0059526E-4	45.0	1