##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936292.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 111793 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76777615772007 31.0 31.0 34.0 30.0 34.0 2 31.90820534380507 33.0 31.0 34.0 30.0 34.0 3 31.836581896898732 33.0 31.0 34.0 30.0 34.0 4 35.58805113021388 37.0 35.0 37.0 33.0 37.0 5 31.02873167371839 37.0 35.0 37.0 0.0 37.0 6 33.28233431431306 37.0 35.0 37.0 17.0 37.0 7 29.603016289034198 35.0 32.0 37.0 0.0 37.0 8 32.653618741781685 35.0 33.0 37.0 17.0 37.0 9 36.415759484046404 39.0 35.0 39.0 32.0 39.0 10 36.791856377411825 38.0 35.0 39.0 33.0 39.0 11 36.90579911085667 39.0 37.0 39.0 33.0 39.0 12 36.687547520864456 39.0 35.0 39.0 33.0 39.0 13 36.237098923904 38.0 35.0 39.0 32.0 39.0 14 37.37821688298909 39.0 36.0 41.0 32.0 41.0 15 37.594160636175786 39.0 36.0 41.0 33.0 41.0 16 37.70954353134812 39.0 36.0 41.0 33.0 41.0 17 37.702342722710725 39.0 36.0 41.0 33.0 41.0 18 37.628259372232606 39.0 36.0 41.0 33.0 41.0 19 37.52071238807439 39.0 36.0 41.0 33.0 41.0 20 37.45584249461057 39.0 35.0 41.0 33.0 41.0 21 37.34672117216641 39.0 35.0 41.0 33.0 41.0 22 37.28062579946866 39.0 35.0 41.0 32.0 41.0 23 37.27568810211731 39.0 35.0 41.0 32.0 41.0 24 37.22268836152532 39.0 35.0 41.0 32.0 41.0 25 37.100659254157236 39.0 35.0 40.0 32.0 41.0 26 36.922025529326525 39.0 35.0 40.0 32.0 41.0 27 36.87128890002057 39.0 35.0 40.0 32.0 41.0 28 36.77334895744814 39.0 35.0 40.0 31.0 41.0 29 36.77751737586432 39.0 35.0 40.0 31.0 41.0 30 36.63798270016906 38.0 35.0 40.0 31.0 41.0 31 36.50201712092886 38.0 35.0 40.0 31.0 41.0 32 36.360684479350226 38.0 35.0 40.0 30.0 41.0 33 36.21792062114802 38.0 35.0 40.0 30.0 41.0 34 36.07024590090614 38.0 35.0 40.0 30.0 41.0 35 35.97748517349029 38.0 35.0 40.0 30.0 41.0 36 35.76307997817395 38.0 35.0 40.0 29.0 41.0 37 35.6559623590028 38.0 35.0 40.0 28.0 41.0 38 35.56350576511946 38.0 34.0 40.0 28.0 41.0 39 35.60605762435931 38.0 35.0 40.0 28.0 41.0 40 35.50538942509817 38.0 35.0 40.0 27.0 41.0 41 35.443381964881524 38.0 35.0 40.0 27.0 41.0 42 35.401035843031316 38.0 34.0 40.0 27.0 41.0 43 35.19127315663771 38.0 34.0 40.0 27.0 41.0 44 35.01530507276842 38.0 34.0 40.0 26.0 41.0 45 34.87487588668343 37.0 34.0 40.0 25.0 41.0 46 34.708595350334996 37.0 34.0 40.0 24.0 41.0 47 34.54851377098745 37.0 33.0 40.0 24.0 41.0 48 34.5104165734885 37.0 33.0 40.0 23.0 41.0 49 34.327685991072784 37.0 33.0 40.0 24.0 41.0 50 34.05011941713703 36.0 33.0 40.0 23.0 41.0 51 31.940112529407028 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 7.0 11 5.0 12 9.0 13 3.0 14 3.0 15 4.0 16 13.0 17 23.0 18 55.0 19 92.0 20 159.0 21 261.0 22 403.0 23 578.0 24 864.0 25 1121.0 26 1392.0 27 1629.0 28 1810.0 29 2138.0 30 2594.0 31 3404.0 32 4530.0 33 6752.0 34 9805.0 35 11761.0 36 10812.0 37 16337.0 38 19164.0 39 16056.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.81018489529756 21.679353805694454 27.522295671464224 10.988165627543763 2 31.0574007317095 25.288703228287996 26.320073707656118 17.33382233234639 3 31.40983782526634 23.968405893034447 27.573282763679302 17.048473518019915 4 27.94003202347195 25.574052042614476 27.57864982601773 18.907266107895843 5 22.037157961589724 39.335199878346586 22.348447577218607 16.27919458284508 6 25.396044475056577 34.953887989409 25.73685293354682 13.913214601987603 7 68.469403272119 20.0379272405249 7.234800032202374 4.257869455153722 8 81.9443077831349 5.338438005957439 8.10426413102788 4.612990079879778 9 75.36071131466193 8.299267395990805 10.640201085935614 5.6998202034116625 10 43.62348268675141 25.339690320503074 16.101187015287184 14.935639977458337 11 34.337570330879394 24.39866539049851 23.94425411251152 17.31951016611058 12 32.03778411886254 23.102519835767893 27.008846707754508 17.850849337615056 13 23.7259935774154 29.622606066569464 29.18697950676697 17.464420849248164 14 18.473428568872826 34.26958754125929 29.640496274364224 17.616487615503654 15 16.764913724472912 26.247618366087323 39.260061005608584 17.727406903831188 16 19.323213439124096 24.593668655461435 37.095345862442194 18.987772042972278 17 20.18462694444196 23.439750252699184 28.566189296288673 27.80943350657018 18 22.258102027855053 24.606191800917767 32.482355782562415 20.653350388664766 19 23.69200218260535 27.686885583176046 27.58759492991511 21.03351730430349 20 26.67072178043348 26.973066292164983 27.9552387000975 18.400973227304036 21 23.2644262163105 28.274578909234034 28.814863184635893 19.646131689819576 22 21.801007218698846 25.092805452935334 28.30946481443382 24.796722513932 23 20.42077768733284 27.31387475065523 28.4847888508225 23.780558711189432 24 21.487034071900744 24.43712933725725 31.620047766854814 22.45578882398719 25 19.57099281708157 26.4041576842915 30.707647169321874 23.317202329305058 26 18.542305868882668 29.712057105543284 28.864955766461225 22.880681259112826 27 20.014669970391708 29.9374737237573 29.985777284803163 20.06207902104783 28 17.437585537556018 27.521401161074486 33.71499109962162 21.326022201747875 29 18.49668583900602 25.77800041147478 32.70598337999696 23.019330369522244 30 21.152487186138664 27.89709552476452 30.569892569302194 20.38052471979462 31 25.06507563085345 27.286144928573346 26.930129793457553 20.71864964711565 32 23.623124882595512 28.453480987181667 26.990956499959744 20.932437630263077 33 23.990768652777902 30.248763339386187 25.11516821267879 20.645299795157122 34 19.762418040485542 27.982968522179384 28.53040888069915 23.724204556635925 35 20.654244899054504 26.672510801212958 29.371248647053033 23.301995652679505 36 23.738516722871736 29.182506954818283 27.285250418183608 19.793725904126376 37 21.412789709552477 28.552771640442604 29.313105471720053 20.721333178284866 38 19.764207061265015 29.129730841823726 26.982905906452103 24.123156190459152 39 19.93863658726396 29.21202579767964 28.173499235193617 22.675838379862782 40 21.623894161530686 27.425688549372502 28.107305466352994 22.843111822743822 41 19.729321156065225 25.843299669925667 29.182506954818283 25.244872219190828 42 22.31892873435725 25.67870975821384 27.54734196237689 24.455019545052014 43 23.419176513735206 25.254711833477945 27.094719705169375 24.23139194761747 44 22.025529326523127 26.93996940774467 28.1520309858399 22.8824702798923 45 21.215997423810077 29.178928913259327 26.106285724508687 23.498787938421906 46 23.18123675006485 28.48568336121224 27.090247153220687 21.242832735502223 47 19.870653797643858 27.055361248020898 29.866807402967986 23.20717755136726 48 21.700822055048167 25.272602041272705 29.73978692762517 23.286788976053955 49 21.65609653556126 23.337776068269033 30.87760414337212 24.12852325279758 50 20.062973531437567 25.761899224459494 29.945524317264944 24.229602926837995 51 18.994033615700445 27.250364512983815 27.492776828602867 26.262825042712873 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 115.0 1 202.5 2 290.0 3 391.5 4 493.0 5 428.0 6 363.0 7 357.5 8 352.0 9 367.0 10 382.0 11 362.0 12 342.0 13 372.5 14 403.0 15 384.0 16 365.0 17 379.5 18 394.0 19 401.0 20 408.0 21 451.0 22 494.0 23 574.5 24 655.0 25 712.5 26 938.5 27 1107.0 28 1300.5 29 1494.0 30 1745.5 31 1997.0 32 2241.5 33 2486.0 34 2888.0 35 3290.0 36 3371.0 37 3452.0 38 3953.0 39 4454.0 40 5247.5 41 6041.0 42 7085.5 43 8130.0 44 9034.5 45 9939.0 46 10451.0 47 10963.0 48 11359.5 49 11756.0 50 10888.0 51 10020.0 52 8647.0 53 7274.0 54 6386.0 55 5498.0 56 4973.5 57 4449.0 58 4026.5 59 3604.0 60 3164.5 61 2725.0 62 2431.0 63 2137.0 64 1888.0 65 1639.0 66 1502.0 67 1365.0 68 1080.5 69 796.0 70 634.0 71 472.0 72 408.5 73 345.0 74 279.5 75 174.5 76 135.0 77 105.5 78 76.0 79 61.0 80 46.0 81 32.0 82 18.0 83 16.0 84 14.0 85 14.0 86 14.0 87 13.0 88 12.0 89 8.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 111793.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.08869070514254 #Duplication Level Percentage of deduplicated Percentage of total 1 75.47315795738602 34.02985875680946 2 9.45919136610721 8.530051076543256 3 4.043169463952704 5.469036522859213 4 2.277506646034202 4.107591709677708 5 1.5275959211205015 3.443865000491981 6 1.095107725270801 2.9626184108128415 7 0.7598301789469508 2.398182354888052 8 0.6725389834543506 2.4259121769699354 9 0.5039082648891006 2.0448507509414724 >10 4.160219021545054 33.40012344243378 >50 0.017855017259850017 0.561752524755575 >100 0.00991945403325001 0.6261572728167237 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC 186 0.16637893249130087 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 153 0.13686008962994106 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 125 0.1118137987172721 No Hit GATTCTGGGGATTGGAAAGTTTTATTCTTTTATTGAACACTTCGGCCATAT 120 0.10734124676858121 No Hit CTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGCT 116 0.1037632052096285 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16548442210156272 0.0 2 0.0 0.0 0.0 0.6986126143855161 0.0 3 0.0 0.0 0.0 0.9669657313069692 0.0 4 0.0 0.0 0.0 1.3274534183714544 0.0 5 0.0 0.0 0.0 2.236275974345442 0.0 6 0.0 0.0 0.0 2.8821124757364056 0.0 7 0.0 0.0 0.0 3.5521007576503 0.0 8 0.0 0.0 0.0 4.960060111098191 0.0 9 0.0 0.0 0.0 5.501238896889787 0.0 10 0.0 0.0 0.0 6.664102403549418 0.0 11 0.0 0.0 0.0 8.094424516740762 0.0 12 0.0 0.0 0.0 9.22419113898008 0.0 13 0.0 0.0 0.0 9.743007165028223 0.0 14 0.0 0.0 0.0 9.909386097519523 0.0 15 0.0 0.0 0.0 10.2931310547172 0.0 16 0.0 0.0 0.0 11.006950345728265 0.0 17 0.0 0.0 0.0 11.846895601692413 0.0 18 0.0 0.0 0.0 12.926569642106394 0.0 19 0.0 0.0 0.0 13.440913116205845 0.0 20 0.0 0.0 0.0 13.966885225371893 0.0 21 0.0 0.0 0.0 14.634189976116573 0.0 22 0.0 0.0 0.0 15.26839784244094 0.0 23 0.0 0.0 0.0 15.960748884098289 0.0 24 0.0 0.0 0.0 16.440206452997952 0.0 25 0.0 0.0 0.0 16.89193419981573 0.0 26 0.0 0.0 0.0 17.32845527000796 0.0 27 0.0 0.0 0.0 17.713989247985115 0.0 28 0.0 0.0 0.0 18.095050674013578 0.0 29 0.0 0.0 0.0 18.52620468186738 0.0 30 0.0 0.0 0.0 19.035181093628402 0.0 31 0.0 0.0 0.0 19.5271618079844 0.0 32 0.0 0.0 0.0 19.960999347007416 0.0 33 0.0 0.0 0.0 20.400203948368862 0.0 34 0.0 0.0 0.0 20.82599089388423 0.0 35 0.0 0.0 0.0 21.385059887470593 0.0 36 0.0 0.0 0.0 21.79385113558094 0.0 37 0.0 0.0 0.0 22.282253808377984 0.0 38 0.0 0.0 0.0 22.74561019026236 0.0 39 0.0 0.0 0.0 23.21254461370569 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCTAGC 20 7.0059526E-4 45.0 25 ACTATCA 20 7.0059526E-4 45.0 11 ATCTCAT 20 7.0059526E-4 45.0 15 GGAGCCT 20 7.0059526E-4 45.0 8 CATATCA 20 7.0059526E-4 45.0 29 GTATTGG 20 7.0059526E-4 45.0 2 CTATCTC 45 3.783498E-10 45.0 5 CATGCAT 20 7.0059526E-4 45.0 25 TCTTCTA 20 7.0059526E-4 45.0 23 CAGTTTA 20 7.0059526E-4 45.0 26 TATGGGC 45 3.783498E-10 45.0 4 CGCATGG 20 7.0059526E-4 45.0 2 GCTATGG 40 6.721166E-9 45.0 2 GCTATCT 20 7.0059526E-4 45.0 4 CGCGCAT 20 7.0059526E-4 45.0 43 CAATTTT 25 3.868166E-5 45.0 41 CGACAAT 20 7.0059526E-4 45.0 20 AGGCGAT 45 3.783498E-10 45.0 7 GCGCATT 20 7.0059526E-4 45.0 44 GCGCATG 20 7.0059526E-4 45.0 1 >>END_MODULE