SRR2936289.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936289.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	434082
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	519	0.11956266327560232	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	514	0.11841080717468128	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGGT	45	3.8380676E-10	45.000004	28
GACGGTC	45	3.8380676E-10	45.000004	29
CGGTCTA	45	3.8380676E-10	45.000004	31
CTAGACG	20	7.0284307E-4	45.0	1
CGGGTCG	20	7.0284307E-4	45.0	6
GTACCGT	20	7.0284307E-4	45.0	25
TAGACCG	25	3.8867798E-5	45.0	1
GGCGTCA	35	1.2095916E-7	45.0	36
ATAGCGC	20	7.0284307E-4	45.0	12
TCGATGG	35	1.2095916E-7	45.0	2
TCGATCA	20	7.0284307E-4	45.0	17
TCGATAG	40	6.7975634E-9	45.0	1
CTCGGGT	20	7.0284307E-4	45.0	4
CTCGGCT	20	7.0284307E-4	45.0	36
AGTTGCG	20	7.0284307E-4	45.0	1
TGCGACG	20	7.0284307E-4	45.0	1
GCGATAT	20	7.0284307E-4	45.0	9
CCGACGG	20	7.0284307E-4	45.0	2
TATAGCG	20	7.0284307E-4	45.0	1
ACGTAGC	20	7.0284307E-4	45.0	30