##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936287.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 557770 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99258834286534 33.0 31.0 34.0 30.0 34.0 2 32.15398282446169 33.0 31.0 34.0 30.0 34.0 3 32.067529626907145 33.0 31.0 34.0 30.0 34.0 4 35.784873693457875 37.0 35.0 37.0 35.0 37.0 5 31.2906413037632 37.0 35.0 37.0 0.0 37.0 6 33.48195134195098 37.0 35.0 37.0 17.0 37.0 7 29.408489162199473 35.0 32.0 37.0 0.0 37.0 8 32.50849454076053 35.0 33.0 37.0 17.0 37.0 9 36.453046954838015 39.0 35.0 39.0 32.0 39.0 10 36.83343134266813 38.0 37.0 39.0 33.0 39.0 11 37.013485845420156 39.0 37.0 39.0 34.0 39.0 12 37.03670867920469 39.0 37.0 39.0 33.0 39.0 13 36.871482869283035 39.0 37.0 39.0 33.0 39.0 14 38.12850995930222 40.0 37.0 41.0 33.0 41.0 15 38.216106997507936 40.0 37.0 41.0 33.0 41.0 16 38.27559029707586 40.0 37.0 41.0 34.0 41.0 17 38.24956702583502 40.0 37.0 41.0 34.0 41.0 18 38.16912705954067 40.0 37.0 41.0 33.0 41.0 19 38.080101116947844 40.0 37.0 41.0 34.0 41.0 20 38.019196084407554 40.0 37.0 41.0 33.0 41.0 21 37.918111407928 40.0 37.0 41.0 33.0 41.0 22 37.92076303852843 40.0 37.0 41.0 33.0 41.0 23 37.860643275902255 40.0 36.0 41.0 33.0 41.0 24 37.79392043315345 40.0 36.0 41.0 33.0 41.0 25 37.65160370762142 40.0 36.0 41.0 33.0 41.0 26 37.48743030281299 40.0 36.0 41.0 33.0 41.0 27 37.44149380569052 40.0 36.0 41.0 33.0 41.0 28 37.32634777775786 39.0 36.0 41.0 32.0 41.0 29 37.288093658676516 39.0 36.0 41.0 32.0 41.0 30 37.17136812664718 39.0 35.0 41.0 32.0 41.0 31 37.03997884432651 39.0 35.0 41.0 31.0 41.0 32 36.94471914947021 39.0 35.0 41.0 31.0 41.0 33 36.793780590566 39.0 35.0 41.0 31.0 41.0 34 36.65454936622622 39.0 35.0 41.0 30.0 41.0 35 36.5586980296538 39.0 35.0 41.0 30.0 41.0 36 36.44254441795005 39.0 35.0 41.0 30.0 41.0 37 36.358493644333684 39.0 35.0 41.0 30.0 41.0 38 36.24727038026427 39.0 35.0 40.0 30.0 41.0 39 36.21460100041236 39.0 35.0 40.0 29.0 41.0 40 36.07210319665812 39.0 35.0 40.0 29.0 41.0 41 35.95116266561486 39.0 35.0 40.0 29.0 41.0 42 35.91979489753841 39.0 35.0 40.0 29.0 41.0 43 35.781564085554976 38.0 35.0 40.0 28.0 41.0 44 35.5594976423974 38.0 35.0 40.0 27.0 41.0 45 35.47257292432364 38.0 34.0 40.0 27.0 41.0 46 35.41612492604479 38.0 34.0 40.0 27.0 41.0 47 35.31528407766642 38.0 34.0 40.0 26.0 41.0 48 35.21357548810442 38.0 34.0 40.0 26.0 41.0 49 35.081587392652885 38.0 34.0 40.0 26.0 41.0 50 34.930102013374686 38.0 34.0 40.0 26.0 41.0 51 33.06802445452426 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 14.0 9 28.0 10 51.0 11 32.0 12 29.0 13 30.0 14 45.0 15 54.0 16 82.0 17 147.0 18 302.0 19 497.0 20 818.0 21 1280.0 22 1825.0 23 2507.0 24 3545.0 25 4545.0 26 5593.0 27 6649.0 28 7701.0 29 8894.0 30 10933.0 31 14147.0 32 18774.0 33 26280.0 34 37943.0 35 46929.0 36 55927.0 37 87754.0 38 109502.0 39 104893.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.776664216433296 21.50761066389372 25.88360793875612 11.832117180916866 2 31.65265252702727 25.038815282284816 25.938469261523565 17.37006292916435 3 32.460691682951754 24.223425426250962 26.821987557595424 16.49389533320186 4 28.993850511859726 25.910142173297235 26.353873460386897 18.74213385445614 5 22.083116696846368 39.882926654355735 20.948419599476487 17.085537049321406 6 25.670975491690122 35.50926008928411 24.12553561503846 14.694228803987306 7 69.9327679868046 20.02527923696147 6.241461534324184 3.8004912419097483 8 84.69458737472435 5.416210983021676 6.560768775660218 3.328432866593757 9 78.91908851318644 7.391577173386881 8.265951915664163 5.423382397762518 10 40.862900478691934 28.504760026534235 16.078311848970007 14.554027645803828 11 30.953260304426557 27.900568334618214 23.33345285691235 17.812718504042884 12 30.154364702296643 24.058303601843054 27.12336626207935 18.663965433780948 13 26.020940531043262 24.68293382577048 28.43268730838876 20.863438334797497 14 21.082883625867293 27.817200638255912 28.36724814887857 22.732667586998225 15 20.269286623518653 27.208885382863908 32.03345464976603 20.488373343851407 16 24.11119278555677 25.332484715922334 30.29115943847823 20.26516306004267 17 24.30320741524284 25.579360668375855 27.616221740143786 22.501210176237517 18 24.752675834125178 26.33379349911254 28.08075012998189 20.832780536780394 19 26.018609821252486 27.89393477598293 25.661114796421465 20.426340606343114 20 27.63809455510336 26.319271384262333 26.706886351004893 19.335747709629416 21 26.724814887857 26.480090359825738 26.758341251770446 20.03675350054682 22 25.688007601699624 24.50633773777722 27.144521935564836 22.661132724958318 23 24.438747153844776 26.131021747315202 27.730964375997274 21.69926672284275 24 23.526543198809545 25.457984473887084 28.92608064255876 22.08939168474461 25 24.168564103483515 27.20780967065278 26.288972156982272 22.334654068881438 26 22.971117127131254 28.289617584308946 26.410706922208078 22.32855836635172 27 22.842390232533123 28.074654427452177 27.611381035193716 21.471574304820983 28 22.055686035462646 28.748229556985855 27.652258099216525 21.543826308334975 29 22.737329006579774 27.637915269734837 27.075855639421263 22.548900084264123 30 23.59072736074009 26.525090987324525 27.872779102497447 22.011402549437943 31 24.447711422270828 27.594348925184214 26.183552360291877 21.774387292253078 32 24.639188195851336 27.922799720314824 26.06898900980691 21.36902307402693 33 24.576079746131917 27.61048460835111 25.19963425784822 22.61380138766875 34 22.727468311311114 28.121627194004695 27.503451243344028 21.647453251340156 35 22.983129246822166 27.306775194076412 26.546246660810013 23.163848898291413 36 23.123151119637125 29.5295551930007 25.778725998171286 21.568567689190886 37 23.736307079979202 28.84253366082794 25.583125661114796 21.83803359807806 38 23.187335281567673 27.671083062911233 25.891317209602526 23.25026444591857 39 22.988328522509278 27.302113774494863 26.39457123904118 23.314986463954675 40 23.62891514423508 26.58138659304014 27.667138784803775 22.122559477921005 41 20.72413360345662 27.94754110117073 27.958298223281997 23.370027072090647 42 22.003693278591534 27.964393925811713 27.090557039639997 22.941355755956756 43 23.16922745934704 26.62835935959266 27.46042275489897 22.741990426161323 44 22.724241174677733 27.409147139501943 27.135557667138784 22.731054018681533 45 22.801333883141798 26.8447567993976 25.76330745647848 24.590601860982126 46 21.98988830521541 28.808290155440414 25.793248113021495 23.40857342632268 47 22.441508148519997 27.75875360811804 27.948078957276294 21.851659286085663 48 22.15106585151586 26.865733187514568 27.655843806586944 23.32735715438263 49 21.976621187944854 27.33671585061943 27.073524929630494 23.613138031805224 50 20.726464313247394 27.676103053229827 27.490901267547557 24.106531365975222 51 21.04935726195385 26.691288523943562 27.031751438765085 25.227602775337505 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 251.0 1 611.0 2 971.0 3 1909.5 4 2848.0 5 2240.5 6 1633.0 7 1360.0 8 1087.0 9 1097.5 10 1108.0 11 1135.0 12 1162.0 13 1158.5 14 1155.0 15 1184.0 16 1213.0 17 1200.0 18 1187.0 19 1389.5 20 1592.0 21 1912.5 22 2233.0 23 2608.5 24 2984.0 25 3644.5 26 5043.5 27 5782.0 28 7068.5 29 8355.0 30 9830.5 31 11306.0 32 13090.5 33 14875.0 34 17177.5 35 19480.0 36 20519.0 37 21558.0 38 23297.5 39 25037.0 40 26203.0 41 27369.0 42 28984.5 43 30600.0 44 32666.5 45 34733.0 46 36631.0 47 38529.0 48 39345.0 49 40161.0 50 39962.5 51 39764.0 52 37247.5 53 34731.0 54 33037.5 55 31344.0 56 30245.5 57 29147.0 58 28313.5 59 27480.0 60 27144.0 61 26808.0 62 23811.5 63 20815.0 64 18032.5 65 15250.0 66 12747.0 67 10244.0 68 8747.0 69 7250.0 70 6172.5 71 5095.0 72 4187.5 73 3280.0 74 2716.0 75 1726.5 76 1301.0 77 1023.0 78 745.0 79 551.0 80 357.0 81 282.5 82 208.0 83 163.0 84 118.0 85 97.5 86 77.0 87 59.0 88 41.0 89 31.0 90 21.0 91 19.5 92 18.0 93 11.5 94 5.0 95 3.0 96 1.0 97 1.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 557770.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.563480372017914 #Duplication Level Percentage of deduplicated Percentage of total 1 69.90084935591499 24.16016634700549 2 8.896129332545657 6.149623831447492 3 4.585464541597952 4.754688410403149 4 3.120127076667279 4.313698038903645 5 2.1918087516531752 3.7878269383490806 6 1.661614008169881 3.445869789434982 7 1.2039015582852313 2.9127719515743355 8 0.9719185136480383 2.687430917573984 9 0.7469547689353786 2.323562084539482 >10 6.667395768330808 43.59348962734485 >50 0.04358178629897291 0.9495247244337957 >100 0.009229084157375264 0.6087378552471449 >500 5.12726897631959E-4 0.11767159705505217 >1k 5.12726897631959E-4 0.1949378866875864 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1100 0.19721390537318248 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 664 0.11904548469799378 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7928536852107499E-4 0.0 0.0 0.028685658963372 0.0 2 1.7928536852107499E-4 0.0 0.0 0.13177474586299012 0.0 3 1.7928536852107499E-4 0.0 0.0 0.1957796224250139 0.0 4 1.7928536852107499E-4 0.0 0.0 0.2949244312171684 0.0 5 1.7928536852107499E-4 0.0 0.0 0.5943309966473637 0.0 6 1.7928536852107499E-4 0.0 0.0 0.8429998027860947 0.0 7 1.7928536852107499E-4 0.0 0.0 1.0561701059576527 0.0 8 1.7928536852107499E-4 0.0 0.0 1.503845671154777 0.0 9 1.7928536852107499E-4 0.0 0.0 1.7173745450633773 0.0 10 1.7928536852107499E-4 0.0 0.0 2.1914050594331 0.0 11 1.7928536852107499E-4 0.0 0.0 2.6527063126378256 0.0 12 1.7928536852107499E-4 0.0 0.0 3.0562776771787656 0.0 13 1.7928536852107499E-4 0.0 0.0 3.208490955053158 0.0 14 1.7928536852107499E-4 0.0 0.0 3.284866522043136 0.0 15 1.7928536852107499E-4 0.0 0.0 3.4098284239023253 0.0 16 1.7928536852107499E-4 0.0 0.0 3.6617243666744357 0.0 17 1.7928536852107499E-4 0.0 0.0 3.9392581171450596 0.0 18 1.7928536852107499E-4 0.0 0.0 4.242967531419761 0.0 19 1.7928536852107499E-4 0.0 0.0 4.4238664682575255 0.0 20 1.7928536852107499E-4 0.0 0.0 4.6219768004733135 0.0 21 1.7928536852107499E-4 0.0 0.0 4.87333488713986 0.0 22 1.7928536852107499E-4 0.0 0.0 5.1467450741344996 0.0 23 1.7928536852107499E-4 0.0 0.0 5.419258834286534 0.0 24 1.7928536852107499E-4 0.0 0.0 5.636014844828513 0.0 25 1.7928536852107499E-4 0.0 0.0 5.835918030729512 0.0 26 1.7928536852107499E-4 0.0 0.0 6.015920540724672 0.0 27 1.7928536852107499E-4 0.0 0.0 6.216899438836797 0.0 28 1.7928536852107499E-4 0.0 0.0 6.411065492945121 0.0 29 1.7928536852107499E-4 0.0 0.0 6.626566505907453 0.0 30 1.7928536852107499E-4 0.0 0.0 6.880793158470337 0.0 31 1.7928536852107499E-4 0.0 0.0 7.093604890904853 0.0 32 1.7928536852107499E-4 0.0 0.0 7.30659590870789 0.0 33 1.7928536852107499E-4 0.0 0.0 7.516539075246069 0.0 34 1.7928536852107499E-4 0.0 0.0 7.757319325169873 0.0 35 1.7928536852107499E-4 0.0 0.0 8.01011169478459 0.0 36 1.7928536852107499E-4 0.0 0.0 8.249099091023181 0.0 37 3.5857073704214997E-4 0.0 0.0 8.487727916524733 0.0 38 3.5857073704214997E-4 0.0 0.0 8.741954569087616 0.0 39 3.5857073704214997E-4 0.0 0.0 9.069508937375621 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.0301595E-4 45.000004 1 CTATGCG 20 7.0301595E-4 45.000004 1 AAGTACG 25 3.8882135E-5 45.000004 1 ACGGGCC 65 0.0 45.000004 5 ATACGTG 20 7.0301595E-4 45.000004 11 TAATGCG 20 7.0301595E-4 45.000004 1 CCGCATG 20 7.0301595E-4 45.000004 1 GTACGAT 20 7.0301595E-4 45.000004 13 CTTACGG 25 3.8882135E-5 45.000004 2 TAGCACG 30 2.1634842E-6 44.999996 1 TACGAAT 165 0.0 42.272728 12 CGAATAT 170 0.0 41.02941 14 CGGGTAG 45 1.9252184E-8 40.0 6 ACCGGGT 45 1.9252184E-8 40.0 4 TATGGGC 165 0.0 39.545452 4 AACGGGC 115 0.0 39.130432 4 CTACGAA 180 0.0 38.75 11 CTAGACG 35 6.242506E-6 38.571426 1 GCGATAT 35 6.242506E-6 38.571426 9 GGCCTAT 65 9.094947E-12 38.076927 8 >>END_MODULE