##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936282.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 820364 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.720794671633566 31.0 31.0 34.0 30.0 34.0 2 31.787477266189153 33.0 31.0 34.0 30.0 34.0 3 31.2012326235671 31.0 31.0 34.0 28.0 34.0 4 35.249867132151095 37.0 35.0 37.0 32.0 37.0 5 30.896559332198876 35.0 35.0 37.0 0.0 37.0 6 33.221440726311734 37.0 35.0 37.0 17.0 37.0 7 29.675285604926593 35.0 32.0 37.0 0.0 37.0 8 32.62026734473965 35.0 33.0 37.0 17.0 37.0 9 36.43174005685281 39.0 35.0 39.0 32.0 39.0 10 36.903897538165985 38.0 37.0 39.0 34.0 39.0 11 37.052497427971 39.0 37.0 39.0 34.0 39.0 12 37.08363970140084 39.0 37.0 39.0 34.0 39.0 13 36.94944683091896 39.0 37.0 39.0 33.0 39.0 14 38.2945692399959 40.0 38.0 41.0 34.0 41.0 15 38.334709958018635 40.0 38.0 41.0 34.0 41.0 16 38.36055336411642 40.0 38.0 41.0 34.0 41.0 17 38.29464237826136 40.0 37.0 41.0 33.0 41.0 18 38.10611996625888 40.0 37.0 41.0 33.0 41.0 19 37.92178593892467 40.0 37.0 41.0 33.0 41.0 20 37.71717554646474 39.0 35.0 41.0 33.0 41.0 21 37.623475676650855 39.0 35.0 41.0 33.0 41.0 22 37.57058573998859 39.0 35.0 41.0 33.0 41.0 23 37.50703346319439 39.0 35.0 41.0 33.0 41.0 24 37.423803336080084 39.0 35.0 41.0 33.0 41.0 25 37.280644933224764 39.0 35.0 41.0 33.0 41.0 26 37.106875728335226 39.0 35.0 41.0 32.0 41.0 27 37.07182543358802 39.0 35.0 41.0 32.0 41.0 28 36.899637234203354 39.0 35.0 41.0 32.0 41.0 29 36.829856015134744 39.0 35.0 41.0 31.0 41.0 30 36.64242336328751 39.0 35.0 40.0 31.0 41.0 31 36.47464296336748 39.0 35.0 40.0 30.0 41.0 32 36.24023847950422 39.0 35.0 40.0 30.0 41.0 33 35.83407974996465 38.0 35.0 40.0 27.0 41.0 34 35.45033424187312 38.0 35.0 40.0 25.0 41.0 35 35.119453072050945 38.0 34.0 40.0 23.0 41.0 36 34.848507491796326 38.0 34.0 40.0 22.0 41.0 37 34.676521641612744 38.0 34.0 40.0 21.0 41.0 38 34.480085669288265 38.0 34.0 40.0 20.0 41.0 39 34.3901792375092 38.0 34.0 40.0 19.0 41.0 40 34.19674437201047 38.0 33.0 40.0 18.0 41.0 41 34.00272805730139 38.0 33.0 40.0 18.0 41.0 42 33.938255457333575 38.0 33.0 40.0 17.0 41.0 43 33.75118727784252 38.0 33.0 40.0 15.0 41.0 44 33.59358406756025 38.0 33.0 40.0 15.0 41.0 45 33.50056560258617 38.0 33.0 40.0 15.0 41.0 46 33.314784656567085 37.0 32.0 40.0 15.0 41.0 47 33.140720460673556 37.0 32.0 40.0 13.0 41.0 48 33.01756903033288 37.0 32.0 40.0 13.0 41.0 49 32.86855347138587 37.0 31.0 40.0 13.0 41.0 50 32.72256583662862 37.0 31.0 40.0 12.0 41.0 51 30.89021580664193 35.0 27.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 17.0 9 41.0 10 37.0 11 45.0 12 40.0 13 25.0 14 33.0 15 60.0 16 121.0 17 230.0 18 511.0 19 882.0 20 1632.0 21 2794.0 22 4231.0 23 6616.0 24 9923.0 25 15187.0 26 19279.0 27 20013.0 28 19767.0 29 19255.0 30 20429.0 31 23849.0 32 28965.0 33 38574.0 34 53496.0 35 64382.0 36 75057.0 37 116336.0 38 143269.0 39 135249.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.20503581337065 19.149182557986457 22.826574544958092 18.8192070836848 2 36.65884899873715 24.64747356051704 22.999302748536017 15.6943746922098 3 30.753421651852104 24.54069169295581 30.067872310340288 14.638014344851797 4 26.13595915959257 23.4185069066902 33.47489650935439 16.970637424362845 5 21.11672379577846 37.36122014130313 26.157534947901173 15.364521115017235 6 23.430940411817193 33.67736760754982 29.751427415147425 13.140264565485566 7 63.159524308721494 18.529945243818595 14.451755562165088 3.8587748852948205 8 75.29986688835689 6.133374940879902 15.209346095148007 3.3574120756152146 9 68.91562769697353 8.129927690634888 16.60433661155292 6.3501080008386515 10 34.89182850539517 30.984050982246902 22.13858726126451 11.985533251093416 11 27.603234661686766 25.272196244593864 31.403742728837443 15.72082636488193 12 27.01556869877274 21.86285600050709 33.971383434670464 17.150191866049706 13 23.31123745069262 21.860539955434415 35.65709855625064 19.171124037622324 14 18.96463033482698 26.79200940070505 33.57741197809753 20.66594828637044 15 18.81676914150304 25.962621470469205 37.45995679966454 17.760652588363214 16 21.90929879906968 25.89801600265248 34.51492264409457 17.677762554183264 17 22.09702034706545 25.30742450912034 33.0422836692005 19.55327147461371 18 21.565792745659245 26.68681219556197 32.89137504814936 18.85602001062943 19 23.069027894934443 26.544192577928822 31.557333086288526 18.82944644084821 20 24.56324265813712 25.887410954161812 32.15572599480231 17.39362039289876 21 24.329322105796937 26.033443690849428 32.333939568289196 17.303294635064432 22 22.860218147066426 23.828446884553685 32.8137265896602 20.49760837871969 23 23.090116094806696 25.33692360951968 33.05752080783652 18.515439487837106 24 22.451009551857467 24.012023930840456 33.22110672823283 20.315859789069243 25 22.28522948349757 26.836501845522232 31.44628481990921 19.43198385107099 26 21.46717798440692 26.927437088902 31.473345978126783 20.132038948564297 27 22.27267408126149 26.929143648429232 31.57634903530628 19.221833235003 28 20.600001950353743 26.703146408179784 32.88857141464033 19.80828022682614 29 22.56217971534587 25.789039987127666 31.8706086566451 19.778171640881364 30 21.523860140132918 26.41498164229537 32.17925213685632 19.88190608071539 31 22.333135047369215 25.469913355534864 30.922614839266473 21.274336757829452 32 23.16471712556865 26.28455173557104 31.017328893027972 19.533402245832338 33 22.071421954156936 27.586169066414424 30.405405405405407 19.937003574023237 34 21.986825360449753 26.805783774032015 32.07588338834956 19.13150747716867 35 21.79459361941772 26.430462575149566 31.363150991511084 20.411792813921625 36 22.307292860242526 28.339005612142902 29.784095840383053 19.569605687231522 37 22.07715111828408 28.552203655938097 30.352136368733877 19.018508857043948 38 21.385263127099677 28.11739666782063 29.032843957072714 21.46449624800698 39 23.29795066580201 26.136812439356188 29.584184581478468 20.981052313363335 40 22.867897664938976 26.378290612459836 31.497725399944414 19.25608632265677 41 21.08893125490636 27.82082100140913 30.72575100808909 20.36449673559542 42 21.724380884582942 27.515834434470555 30.38443910264224 20.375345578304266 43 22.71516058725151 26.910371493629658 29.280538882739858 21.093929036378974 44 22.143585042737126 27.441964786363126 28.74029089526113 21.67415927563862 45 21.494970525279022 26.034296970613045 29.149865181797345 23.320867322310583 46 22.06934970330244 28.003422870823197 28.47041069573994 21.456816730134427 47 22.554500197473317 26.207878453954585 30.742816603361433 20.49480474521066 48 21.796543973163132 25.838164522090196 30.235846526663774 22.129444978082898 49 21.014695915471666 25.810128186999915 30.902867507594188 22.272308389934224 50 19.841314343389033 26.406083153331934 31.093636483317162 22.65896601996187 51 20.732382210823488 25.61509281245886 30.164536717847202 23.487988258870452 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 375.0 1 850.0 2 1325.0 3 13101.0 4 24877.0 5 19237.0 6 13597.0 7 10837.5 8 8078.0 9 7618.0 10 7158.0 11 6820.5 12 6483.0 13 6216.0 14 5949.0 15 5669.0 16 5389.0 17 5159.5 18 4930.0 19 4883.0 20 4836.0 21 4848.0 22 4860.0 23 5014.5 24 5169.0 25 5870.0 26 7512.0 27 8453.0 28 10565.0 29 12677.0 30 14780.5 31 16884.0 32 18703.0 33 20522.0 34 21845.5 35 23169.0 36 24892.0 37 26615.0 38 29125.0 39 31635.0 40 34570.5 41 37506.0 42 40038.0 43 42570.0 44 47799.0 45 53028.0 46 59330.5 47 65633.0 48 61700.0 49 57767.0 50 55115.0 51 52463.0 52 48772.5 53 45082.0 54 42537.5 55 39993.0 56 38607.5 57 37222.0 58 36599.0 59 35976.0 60 35225.0 61 34474.0 62 30703.0 63 26932.0 64 22977.5 65 19023.0 66 15670.0 67 12317.0 68 9932.5 69 7548.0 70 6228.0 71 4908.0 72 4063.0 73 3218.0 74 2618.5 75 1611.5 76 1204.0 77 1032.0 78 860.0 79 679.5 80 499.0 81 361.0 82 223.0 83 184.5 84 146.0 85 120.5 86 95.0 87 70.0 88 45.0 89 35.5 90 26.0 91 22.0 92 18.0 93 14.0 94 10.0 95 8.5 96 7.0 97 3.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 820364.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.57446937222957 #Duplication Level Percentage of deduplicated Percentage of total 1 74.1671848979028 30.092941720644443 2 8.52907279054044 6.921252054265993 3 4.263645514365408 5.189854630099898 4 2.67143536214271 4.335682891246016 5 1.8345164269226604 3.7217265288512755 6 1.27643414480111 3.107438286834041 7 1.0217514272669717 2.9019915394172915 8 0.802856569305483 2.6060383425262907 9 0.65673137277794 2.3981874273504724 >10 4.703287591019007 31.91844980718682 >50 0.043241356903791044 1.1410390807100192 >100 0.024665777859136158 1.8399908929151993 >500 0.0030451577603455514 0.7478824116793663 >1k 0.0018270946562073307 1.6823338703826616 >5k 0.0 0.0 >10k+ 3.0451577603455513E-4 1.3951905158902038 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11292 1.3764621558235124 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3434 0.4185946726087444 No Hit GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 2502 0.30498656693857845 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2274 0.2771940260664778 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 2068 0.2520832215943167 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 1704 0.2077126738862261 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1634 0.19917987625005487 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.875884363526435E-4 0.0 0.0 0.0442486505990024 0.0 2 4.875884363526435E-4 0.0 0.0 0.22733810844942 0.0 3 4.875884363526435E-4 0.0 0.0 0.3459439955922005 0.0 4 4.875884363526435E-4 0.0 0.0 0.5886411397867288 0.0 5 4.875884363526435E-4 0.0 0.0 1.4759301968394518 0.0 6 4.875884363526435E-4 0.0 0.0 2.060304937808095 0.0 7 4.875884363526435E-4 0.0 0.0 2.499865913180003 0.0 8 4.875884363526435E-4 0.0 0.0 3.130317761383971 0.0 9 4.875884363526435E-4 0.0 0.0 3.477602625176141 0.0 10 4.875884363526435E-4 0.0 0.0 4.4068242877551915 0.0 11 4.875884363526435E-4 0.0 0.0 4.827003622782082 0.0 12 4.875884363526435E-4 0.0 0.0 5.530471839329858 0.0 13 4.875884363526435E-4 0.0 0.0 5.755493902706603 0.0 14 4.875884363526435E-4 0.0 0.0 5.87507496672209 0.0 15 4.875884363526435E-4 0.0 0.0 6.030006192373142 0.0 16 4.875884363526435E-4 0.0 0.0 6.239913014222955 0.0 17 4.875884363526435E-4 0.0 0.0 6.475783920308546 0.0 18 4.875884363526435E-4 0.0 0.0 6.7921069183923235 0.0 19 4.875884363526435E-4 0.0 0.0 6.963372356661189 0.0 20 4.875884363526435E-4 0.0 0.0 7.162430335802156 0.0 21 4.875884363526435E-4 0.0 0.0 7.382820309033551 0.0 22 4.875884363526435E-4 0.0 0.0 7.626614527209873 0.0 23 6.094855454408043E-4 0.0 0.0 7.872237202022517 0.0 24 6.094855454408043E-4 0.0 0.0 8.068735341872632 0.0 25 6.094855454408043E-4 0.0 0.0 8.256700684086576 0.0 26 6.094855454408043E-4 0.0 0.0 8.439668244827905 0.0 27 7.313826545289651E-4 0.0 0.0 8.617638024096621 0.0 28 7.313826545289651E-4 0.0 0.0 8.816817900346676 0.0 29 7.313826545289651E-4 0.0 0.0 9.016729159251259 0.0 30 7.313826545289651E-4 0.0 0.0 9.268202895300135 0.0 31 7.313826545289651E-4 0.0 0.0 9.497125666167701 0.0 32 7.313826545289651E-4 0.0 0.0 9.724219980398944 0.0 33 7.313826545289651E-4 0.0 0.0 9.94521943917578 0.0 34 7.313826545289651E-4 0.0 0.0 10.16987581122526 0.0 35 7.313826545289651E-4 0.0 0.0 10.39721391967468 0.0 36 7.313826545289651E-4 0.0 0.0 10.63978916676012 0.0 37 7.313826545289651E-4 0.0 0.0 10.8850461502455 0.0 38 7.313826545289651E-4 0.0 0.0 11.16077741100292 0.0 39 7.313826545289651E-4 0.0 0.0 11.43992179081481 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGCGA 30 2.1647393E-6 45.000004 27 CGAATAT 70 0.0 45.0 14 CGTTATT 1215 0.0 43.14815 1 CGTTTTT 4740 0.0 43.10127 1 CGTTTTA 530 0.0 42.0283 1 CGGTTTT 1250 0.0 41.76 1 ACGGGTA 60 3.6379788E-12 41.250004 5 ATTAGCG 45 1.9272193E-8 40.0 1 CGCACGG 40 3.4566074E-7 39.375 2 CACGACC 35 6.246104E-6 38.571426 27 TACGACG 35 6.246104E-6 38.571426 1 TTAACGG 70 0.0 38.571426 2 GTTATTT 1425 0.0 38.052635 2 TTACGGG 315 0.0 37.857143 3 CTAGACG 30 1.13963695E-4 37.500004 1 TCGTCAC 30 1.13963695E-4 37.500004 27 TATTACG 30 1.13963695E-4 37.500004 1 TACGTGC 30 1.13963695E-4 37.500004 16 AAGGGCG 210 0.0 37.5 5 TTTACGG 85 0.0 37.058823 2 >>END_MODULE