##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936281.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 413910 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.930656422893865 31.0 31.0 34.0 30.0 34.0 2 32.06115822280206 33.0 31.0 34.0 30.0 34.0 3 32.02411635379672 33.0 31.0 34.0 30.0 34.0 4 35.728293590394046 37.0 35.0 37.0 35.0 37.0 5 31.215602425648086 37.0 35.0 37.0 0.0 37.0 6 33.42485806093112 37.0 35.0 37.0 17.0 37.0 7 29.54737020125148 35.0 32.0 37.0 0.0 37.0 8 32.59216013142954 35.0 33.0 37.0 17.0 37.0 9 36.43955690850668 39.0 35.0 39.0 32.0 39.0 10 36.82656616172598 38.0 37.0 39.0 33.0 39.0 11 36.99976081756904 39.0 37.0 39.0 33.0 39.0 12 37.01718247928294 39.0 37.0 39.0 33.0 39.0 13 36.81606387862096 39.0 37.0 39.0 33.0 39.0 14 38.08316783841898 40.0 37.0 41.0 33.0 41.0 15 38.18126162692373 40.0 37.0 41.0 33.0 41.0 16 38.23508492184291 40.0 37.0 41.0 34.0 41.0 17 38.17854364475369 40.0 37.0 41.0 33.0 41.0 18 38.10006281558793 40.0 37.0 41.0 33.0 41.0 19 38.03174361576188 40.0 37.0 41.0 33.0 41.0 20 37.975443937087775 40.0 37.0 41.0 33.0 41.0 21 37.89554009325699 40.0 36.0 41.0 33.0 41.0 22 37.877243845280375 40.0 36.0 41.0 33.0 41.0 23 37.8425478968858 40.0 36.0 41.0 33.0 41.0 24 37.777014326786016 40.0 36.0 41.0 33.0 41.0 25 37.65189050759827 40.0 36.0 41.0 33.0 41.0 26 37.48202990988379 39.0 36.0 41.0 33.0 41.0 27 37.40589258534464 39.0 36.0 41.0 32.0 41.0 28 37.29269164794279 39.0 36.0 41.0 32.0 41.0 29 37.26364185450944 39.0 36.0 41.0 32.0 41.0 30 37.10484404822304 39.0 35.0 41.0 31.0 41.0 31 36.99808895653644 39.0 35.0 41.0 31.0 41.0 32 36.90895122127999 39.0 35.0 41.0 31.0 41.0 33 36.70531758111667 39.0 35.0 41.0 30.0 41.0 34 36.61116184677829 39.0 35.0 41.0 30.0 41.0 35 36.47404025029596 39.0 35.0 41.0 30.0 41.0 36 36.342055036118964 39.0 35.0 41.0 30.0 41.0 37 36.2537532313788 39.0 35.0 40.0 30.0 41.0 38 36.12590418206857 39.0 35.0 40.0 29.0 41.0 39 36.14511850402261 39.0 35.0 40.0 29.0 41.0 40 35.93560677441956 39.0 35.0 40.0 28.0 41.0 41 35.84737020125148 38.0 35.0 40.0 28.0 41.0 42 35.815897175714525 38.0 35.0 40.0 28.0 41.0 43 35.66113406296055 38.0 35.0 40.0 27.0 41.0 44 35.50954555338117 38.0 34.0 40.0 27.0 41.0 45 35.347331545505064 38.0 34.0 40.0 26.0 41.0 46 35.23440844628059 38.0 34.0 40.0 26.0 41.0 47 35.09201517238047 38.0 34.0 40.0 26.0 41.0 48 34.98433234277983 38.0 34.0 40.0 25.0 41.0 49 34.83498103452441 38.0 34.0 40.0 24.0 41.0 50 34.653035684085914 38.0 34.0 40.0 24.0 41.0 51 32.578889130487305 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 7.0 10 18.0 11 19.0 12 12.0 13 11.0 14 20.0 15 29.0 16 30.0 17 88.0 18 178.0 19 362.0 20 549.0 21 946.0 22 1354.0 23 1947.0 24 2634.0 25 3455.0 26 4280.0 27 5130.0 28 5970.0 29 7098.0 30 8926.0 31 11120.0 32 14515.0 33 20302.0 34 29337.0 35 35274.0 36 41046.0 37 63336.0 38 79692.0 39 76208.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.617694667922976 21.095407214128674 24.349254668889373 10.937643449058974 2 30.51532941943901 25.268536638399652 26.03102123650069 18.18511270566065 3 32.658065763088594 24.79137976854872 25.96844724698606 16.582107221376628 4 29.498200091807398 26.002512623517188 26.028363653934427 18.47092363074098 5 21.914909038196708 40.16694450484405 21.158464400473534 16.75968205648571 6 25.97738638834529 36.61158222802058 23.87233939745355 13.53869198618057 7 69.40856707979995 19.621415283515738 6.82346403807591 4.146553598608394 8 83.21374211785171 5.725399241380977 7.084873523229687 3.975985117537629 9 76.31175859486362 8.77364644487932 9.157546326496098 5.757048633760962 10 40.17588364620328 28.89541204609698 16.63767485685294 14.291029450846802 11 30.92918750452997 27.113865333043414 23.63798893479259 18.318958227634027 12 30.61293517914522 23.31787103476601 27.311251238191876 18.757942547896885 13 24.949385132033534 26.314899374260104 28.339252494503636 20.396462999202726 14 19.527191901621123 29.75308641975309 28.093546906332296 22.626174772293496 15 19.431518929235825 27.21678625788215 33.27824889468725 20.07344591819478 16 23.049455195573916 25.515933415476795 31.060858640767318 20.37375274818197 17 21.748206131767773 25.52245657268488 28.454011741682972 24.275325553864366 18 22.66048174723974 27.35812133072407 28.839844410620668 21.141552511415526 19 24.789446981227805 27.66640090841004 26.80582735377256 20.738324756589595 20 27.522891449832088 25.426542001884467 26.854630233625663 20.195936314657775 21 25.506511077287332 27.077142373946028 26.671981831799187 20.744364716967457 22 22.919233649827255 26.239279070329296 26.70194003527337 24.139547244570075 23 23.746225024763838 26.854630233625663 27.607450895122128 21.791693846488368 24 23.217124495663306 25.239544828585924 28.96909956270687 22.5742311130439 25 22.5189050759827 27.30714406513493 26.730448648256868 23.443502210625496 26 21.615568601869974 29.584933922833468 26.59322074847189 22.206276726824672 27 22.78273054528762 28.563455823729793 27.624845981010367 21.028967649972216 28 20.959628904834386 29.12299775313474 28.50595540093257 21.411417941098307 29 23.349520427145997 26.786741078978523 28.0785678045952 21.785170689280278 30 21.94124326544418 28.048368002705903 28.32234060544563 21.68804812640429 31 24.6601918291416 27.50597956077408 25.590828924162256 22.24299968592206 32 25.456017008528427 28.907975163682924 25.020415066077167 20.615592761711483 33 24.0073929115025 29.328114807566863 25.55700514604624 21.107487134884394 34 23.55512067840835 27.716170181923605 25.99478147423353 22.733927665434514 35 23.65804160324708 27.02833949409292 26.623178951946073 22.690439950713923 36 23.565026213428037 30.303689207798794 25.694716242661446 20.436568336111716 37 23.175086371433405 29.964968229808413 26.190717788891305 20.66922760986688 38 22.54354811432437 29.187987726800515 26.28880674542775 21.979657413447367 39 24.333067575076708 27.48713488439516 26.114372689715154 22.065424850812978 40 23.608272329733516 27.354738952912466 27.76376506970114 21.273223647652873 41 20.63781981590201 28.345775651711726 28.106834819163584 22.90956971322268 42 21.64890918315576 28.496533062743108 27.107100577420212 22.74745717668092 43 23.644270493585562 26.745910946824186 27.11289893938296 22.496919620207294 44 23.270276146988476 27.56372158198642 26.388103694039767 22.777898576985333 45 22.507066753642096 27.16194341765118 26.084656084656082 24.246333744050638 46 22.171728153463313 28.8823657316808 25.61740474982484 23.328501365031045 47 22.574472711459013 27.240462902563362 28.116015558937935 22.069048827039694 48 22.35171897272354 26.175980285569327 28.363895532845305 23.10840520886183 49 21.760286052523494 26.813316904641106 28.03024812157232 23.396148921263077 50 20.41168369935493 26.88724601966611 28.4711652291561 24.229905051822858 51 20.907443647169675 26.24870140851876 26.690584909762993 26.153270034548576 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 160.0 1 501.0 2 842.0 3 1213.5 4 1585.0 5 1294.5 6 1004.0 7 873.0 8 742.0 9 746.5 10 751.0 11 778.0 12 805.0 13 835.5 14 866.0 15 813.5 16 761.0 17 863.0 18 965.0 19 999.5 20 1034.0 21 1243.0 22 1452.0 23 1753.5 24 2055.0 25 2376.0 26 3745.5 27 4794.0 28 5769.0 29 6744.0 30 7819.0 31 8894.0 32 10155.5 33 11417.0 34 12394.0 35 13371.0 36 14050.5 37 14730.0 38 15754.0 39 16778.0 40 19142.5 41 21507.0 42 23000.0 43 24493.0 44 26790.5 45 29088.0 46 31644.0 47 34200.0 48 34230.5 49 34261.0 50 33206.5 51 32152.0 52 29051.0 53 25950.0 54 23834.5 55 21719.0 56 20678.5 57 19638.0 58 19507.5 59 19377.0 60 18608.5 61 17840.0 62 16103.0 63 14366.0 64 12061.0 65 9756.0 66 7928.0 67 6100.0 68 4976.5 69 3853.0 70 3408.0 71 2963.0 72 2424.0 73 1885.0 74 1474.5 75 817.5 76 571.0 77 425.5 78 280.0 79 228.0 80 176.0 81 140.0 82 104.0 83 82.0 84 60.0 85 41.0 86 22.0 87 17.5 88 13.0 89 11.5 90 10.0 91 8.0 92 6.0 93 5.5 94 5.0 95 4.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 413910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.61653235899135 #Duplication Level Percentage of deduplicated Percentage of total 1 72.39430782629614 26.508285151283534 2 8.80906464150623 6.451148009963188 3 4.168980129209404 4.579607874155643 4 2.6951332105291526 3.947457296605318 5 1.9324541523040588 3.537988500005438 6 1.386196840164719 3.045463287229379 7 1.063150515557011 2.7250219678760135 8 0.816292862993468 2.391185122577121 9 0.6702589891249313 2.208830396777809 >10 5.9865953809511385 41.531843672005905 >50 0.055216084021669234 1.331032505483189 >100 0.021034698674921613 1.489649218161927 >500 0.0013146686671826008 0.25248699787556333 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 528 0.12756396318040153 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 521 0.12587277427460075 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 499 0.12055760914208404 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG 485 0.11717523133048247 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06813075306225991 0.0 2 0.0 0.0 0.0 0.34137856055664273 0.0 3 0.0 0.0 0.0 0.47860646034162013 0.0 4 0.0 0.0 0.0 0.6714019956029088 0.0 5 0.0 0.0 0.0 1.2932763161073664 0.0 6 0.0 0.0 0.0 1.6795921818752868 0.0 7 0.0 0.0 0.0 2.0758135826628976 0.0 8 0.0 0.0 0.0 2.8201782996303546 0.0 9 0.0 0.0 0.0 3.093426107124737 0.0 10 0.0 0.0 0.0 3.9136527264381145 0.0 11 0.0 0.0 0.0 4.730980164770119 0.0 12 0.0 0.0 0.0 5.4780024643038345 0.0 13 0.0 0.0 0.0 5.785798845159576 0.0 14 0.0 0.0 0.0 5.9090140368679185 0.0 15 0.0 0.0 0.0 6.142398105868425 0.0 16 0.0 0.0 0.0 6.620038172549588 0.0 17 0.0 0.0 0.0 7.16411780338721 0.0 18 0.0 0.0 0.0 7.778019376192892 0.0 19 0.0 0.0 0.0 8.094513299992752 0.0 20 0.0 0.0 0.0 8.461259694136407 0.0 21 0.0 0.0 0.0 8.877050566548283 0.0 22 0.0 0.0 0.0 9.338745137831896 0.0 23 0.0 0.0 0.0 9.80382208692711 0.0 24 0.0 0.0 0.0 10.17032688265565 0.0 25 0.0 0.0 0.0 10.494310357324055 0.0 26 0.0 0.0 0.0 10.788577226933391 0.0 27 0.0 0.0 0.0 11.081152907636925 0.0 28 2.4159841511439684E-4 0.0 0.0 11.410451547437848 0.0 29 2.4159841511439684E-4 0.0 0.0 11.747239738107318 0.0 30 2.4159841511439684E-4 0.0 0.0 12.126790848252035 0.0 31 2.4159841511439684E-4 0.0 0.0 12.50126839167935 0.0 32 2.4159841511439684E-4 0.0 0.0 12.846512526877824 0.0 33 2.4159841511439684E-4 0.0 0.0 13.198279819284386 0.0 34 2.4159841511439684E-4 0.0 0.0 13.55077190693629 0.0 35 2.4159841511439684E-4 0.0 0.0 13.94747650455413 0.0 36 2.4159841511439684E-4 0.0 0.0 14.327510811529077 0.0 37 2.4159841511439684E-4 0.0 0.0 14.678070111860066 0.0 38 2.4159841511439684E-4 0.0 0.0 15.039742939286318 0.0 39 2.4159841511439684E-4 0.0 0.0 15.390785436447537 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.028049E-4 45.000004 25 CTTAACG 20 7.028049E-4 45.000004 12 CTCACGA 20 7.028049E-4 45.000004 24 GATCGCC 20 7.028049E-4 45.000004 20 CGCATCG 20 7.028049E-4 45.000004 21 TAACGTT 20 7.028049E-4 45.000004 14 CGCTGAT 20 7.028049E-4 45.000004 43 GTCCGTT 30 2.1621217E-6 45.000004 9 ACCCGTC 20 7.028049E-4 45.000004 36 CGCCGTA 20 7.028049E-4 45.000004 35 AATGTCG 20 7.028049E-4 45.000004 27 ACAACGG 25 3.886465E-5 45.0 2 CGACATA 25 3.886465E-5 45.0 8 GCCGATG 50 1.0786607E-9 40.5 9 TCGACAC 45 1.9232175E-8 40.0 34 ACGGGAG 245 0.0 39.489796 5 AAGCACG 40 3.4510776E-7 39.375004 1 TACGGGA 195 0.0 39.23077 4 TCACGGG 70 0.0 38.57143 3 ACGTACG 35 6.2386043E-6 38.57143 1 >>END_MODULE