SRR2936278.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936278.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	351116
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCG	839	0.2389523690176466	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	818	0.23297143963818223	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGC	703	0.20021873113159183	No Hit
GCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC	514	0.1463903667164128	No Hit
GAATCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTC	448	0.12759316009523916	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCGATC	85	0.0	45.000004	8
ACAAACG	25	3.8852522E-5	45.0	1
CGAACGG	20	7.026586E-4	45.0	2
TAGACGG	40	6.7921064E-9	45.0	2
CTATACG	20	7.026586E-4	45.0	1
TTAGACG	20	7.026586E-4	45.0	1
CGGTTAC	20	7.026586E-4	45.0	18
GGTCAAC	20	7.026586E-4	45.0	28
CTGACCG	25	3.8852522E-5	45.0	13
TATTGCG	20	7.026586E-4	45.0	1
CTAACGG	25	3.8852522E-5	45.0	2
TACGACG	40	6.7921064E-9	45.0	1
CGCTAAG	20	7.026586E-4	45.0	2
GGGCGCC	20	7.026586E-4	45.0	7
ACGGACT	25	3.8852522E-5	45.0	5
GACGGGT	20	7.026586E-4	45.0	4
GCGATCA	35	1.2087003E-7	45.0	9
CCGACTT	20	7.026586E-4	45.0	44
CCGACGG	20	7.026586E-4	45.0	2
TAAGGCG	25	3.8852522E-5	45.0	5