SRR2936268.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936268.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	452085
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG	1328	0.2937500691241691	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC	998	0.22075494652554276	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC	804	0.17784266233119878	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	671	0.14842341595054026	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	628	0.13891193027859805	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTACG	20	7.0287404E-4	45.0	1
GCGCGAC	20	7.0287404E-4	45.0	9
ACTCTTA	20	7.0287404E-4	45.0	5
GGTCCGA	20	7.0287404E-4	45.0	11
CTAAGCG	20	7.0287404E-4	45.0	1
CGTTCGG	20	7.0287404E-4	45.0	2
CTAACGG	35	1.2097371E-7	45.0	2
GCGATCA	25	3.8870377E-5	45.0	9
ATCGATG	20	7.0287404E-4	45.0	2
TTTACGG	30	2.1625692E-6	44.999996	2
CGAATAT	120	0.0	44.999996	14
GCTACGA	135	0.0	40.000004	10
TATTGCG	40	3.4520235E-7	39.375	1
TACGGCT	185	0.0	38.918922	7
CATGCGG	35	6.2398813E-6	38.571426	2
GCGCGTC	35	6.2398813E-6	38.571426	22
AGCGCGT	35	6.2398813E-6	38.571426	21
CACAACG	90	0.0	37.5	12
CGCATGG	30	1.13882656E-4	37.499996	2
ATACTCG	30	1.13882656E-4	37.499996	44