##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936268.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452085 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.936644657531218 31.0 31.0 34.0 30.0 34.0 2 32.07021246004623 33.0 31.0 34.0 30.0 34.0 3 32.00904697125541 33.0 31.0 34.0 30.0 34.0 4 35.72995343795968 37.0 35.0 37.0 35.0 37.0 5 31.239050178616854 37.0 35.0 37.0 0.0 37.0 6 33.442848136965395 37.0 35.0 37.0 17.0 37.0 7 29.53841423626088 35.0 32.0 37.0 0.0 37.0 8 32.56705929194731 35.0 33.0 37.0 17.0 37.0 9 36.43377462202904 39.0 35.0 39.0 32.0 39.0 10 36.85276883771857 38.0 37.0 39.0 33.0 39.0 11 36.991813486401895 39.0 37.0 39.0 33.0 39.0 12 37.027598792262516 39.0 37.0 39.0 33.0 39.0 13 36.85051704878507 39.0 37.0 39.0 33.0 39.0 14 38.12796708583563 40.0 37.0 41.0 33.0 41.0 15 38.20443943063805 40.0 37.0 41.0 33.0 41.0 16 38.25254100445713 40.0 37.0 41.0 34.0 41.0 17 38.1973633276928 40.0 37.0 41.0 33.0 41.0 18 38.10349602397779 40.0 37.0 41.0 33.0 41.0 19 38.006140438191935 40.0 37.0 41.0 33.0 41.0 20 37.956010484753975 40.0 37.0 41.0 33.0 41.0 21 37.87260360330469 40.0 37.0 41.0 33.0 41.0 22 37.85308736188991 40.0 36.0 41.0 33.0 41.0 23 37.82968468319011 40.0 36.0 41.0 33.0 41.0 24 37.760224294103985 40.0 36.0 41.0 33.0 41.0 25 37.638581240253494 40.0 36.0 41.0 33.0 41.0 26 37.45949987281153 39.0 36.0 41.0 32.0 41.0 27 37.41823550880918 39.0 36.0 41.0 32.0 41.0 28 37.318404724775206 39.0 36.0 41.0 32.0 41.0 29 37.2804981364124 39.0 36.0 41.0 32.0 41.0 30 37.16648417886017 39.0 36.0 41.0 31.0 41.0 31 37.01301525155667 39.0 35.0 41.0 31.0 41.0 32 36.87652985611113 39.0 35.0 41.0 31.0 41.0 33 36.74617162701704 39.0 35.0 41.0 30.0 41.0 34 36.59323578530586 39.0 35.0 41.0 30.0 41.0 35 36.43434309919595 39.0 35.0 41.0 30.0 41.0 36 36.313954234270106 39.0 35.0 41.0 30.0 41.0 37 36.18417111826316 39.0 35.0 40.0 29.0 41.0 38 36.042169061127886 39.0 35.0 40.0 29.0 41.0 39 36.012800690135705 39.0 35.0 40.0 29.0 41.0 40 35.86456529192519 39.0 35.0 40.0 28.0 41.0 41 35.73903580078967 39.0 35.0 40.0 27.0 41.0 42 35.71089728701461 38.0 35.0 40.0 27.0 41.0 43 35.56280124312906 38.0 35.0 40.0 26.0 41.0 44 35.42686662906312 38.0 34.0 40.0 26.0 41.0 45 35.281424953272065 38.0 34.0 40.0 26.0 41.0 46 35.127515843259566 38.0 34.0 40.0 25.0 41.0 47 34.94233385314708 38.0 34.0 40.0 24.0 41.0 48 34.82550184146787 38.0 34.0 40.0 23.0 41.0 49 34.667476248935486 38.0 34.0 40.0 23.0 41.0 50 34.50223741110632 38.0 33.0 40.0 23.0 41.0 51 32.363062255991686 35.0 30.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 22.0 10 15.0 11 20.0 12 16.0 13 5.0 14 16.0 15 34.0 16 63.0 17 112.0 18 192.0 19 355.0 20 564.0 21 1071.0 22 1490.0 23 2189.0 24 2979.0 25 4014.0 26 4998.0 27 5915.0 28 6769.0 29 8144.0 30 9957.0 31 12195.0 32 15888.0 33 22055.0 34 31090.0 35 38188.0 36 44526.0 37 69738.0 38 86072.0 39 83377.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.51128659433513 20.75096497340102 24.733623101850316 11.004125330413528 2 31.55424311799772 26.259221164161605 24.996847937887786 17.189687779952887 3 32.30454449937511 25.2501188935709 25.873674198436134 16.571662408617847 4 28.438678567083624 25.629029939060132 27.256378778327083 18.675912715529158 5 22.80013714235155 39.574195118174686 20.704734729088557 16.920933010385212 6 25.370007852505612 35.80543481867348 24.63342070628311 14.191136622537798 7 68.67314774876407 19.70647112821704 7.344194122786645 4.276187000232257 8 81.55612329539798 6.780583297388764 7.829279892055697 3.834013515157548 9 75.46213654511872 8.021500381565414 9.802802570313105 6.713560503002753 10 40.11966776159351 28.234292223807472 16.592676156032603 15.05336385856642 11 30.731610206045325 26.7759381532234 24.834931484123558 17.657520156607717 12 29.472776137230834 23.416835329639337 27.898735857194996 19.211652675934836 13 24.417310903922935 25.047059734341993 29.507946514482896 21.027682847252176 14 20.07896745081124 29.179468462789078 28.226992711547606 22.514571374852075 15 19.034916000309675 27.47691252751142 33.84120242874681 19.646969043432097 16 21.890573675304424 26.289967594589513 30.972051715938377 20.84740701416769 17 22.24979815742615 25.68123251158521 28.861165488790824 23.207803842197816 18 23.11622814293772 26.63724742028601 29.445126469579836 20.801397967196433 19 24.446730150303594 28.154218786290187 26.992047955583576 20.407003107822643 20 26.302133448355953 26.58792041319663 28.688631562648613 18.4213145757988 21 24.595153566254133 27.833482641538648 27.794109514803633 19.777254277403586 22 23.5575168386476 24.735613877921185 28.00380459426878 23.70306468916244 23 22.75125252994459 27.351936029728925 28.195582689096078 21.70122875123041 24 23.302255106893615 25.306966610261345 28.99830784033976 22.39247044250528 25 21.590187685944016 27.918201223221295 27.958459139321146 22.533151951513542 26 22.005153898050146 27.973942953205704 27.971952177134828 22.048950971609322 27 22.344470619463156 28.01950960549454 27.871307386885206 21.764712388157097 28 20.297731621265914 27.871528584226418 29.75679352334185 22.07394627116582 29 21.70874946083148 26.25877876947919 29.723835119501864 22.308636650187466 30 22.196931992877445 26.61070373934105 28.314586858665958 22.877777409115545 31 23.484521716048974 27.26832343475231 26.39415154229846 22.853003306900252 32 23.537387880597674 27.253282015550173 27.798312264286583 21.41101783956557 33 22.687990090359115 27.274959354988553 26.959531946426 23.07751860822633 34 23.069555503942844 26.13756262649723 28.4769457071126 22.31593616244733 35 21.90826946260106 25.82899233551213 28.285831204308927 23.976906997577892 36 22.684229735558578 27.324065164736723 27.93103066901136 22.060674430693343 37 22.97775860734154 27.58618401406815 28.794806286428436 20.641251092161873 38 22.633575544421955 26.653394826194187 27.06526427552341 23.647765353860446 39 22.77845980291317 25.241049802581372 29.052501188935707 22.927989205569748 40 23.084154528462566 25.767499474656315 29.260647887012396 21.88769810986872 41 20.924383688908062 26.57796653284227 29.609697291438557 22.88795248681111 42 21.50502670957895 26.0561620049327 29.626065894687947 22.8127453908004 43 22.642202240729066 25.44388776446907 28.770032184213147 23.143877810588716 44 22.482497760376923 25.830098322218163 27.921076788657 23.766327128747914 45 21.802758330844863 25.89358195914485 27.450147649225254 24.85351206078503 46 22.05027815565657 27.120121216142984 27.479345698264705 23.350254929935744 47 21.35770928033445 25.879204131966333 30.507316102060457 22.255770485638763 48 21.88858289923355 25.685877655750577 29.382970016700398 23.04256942831547 49 21.072143512834977 24.979594545273564 30.122211531017395 23.82605041087406 50 20.226506077396948 25.48834843005187 29.968479378877866 24.316666113673314 51 20.77352710220423 24.716148511894886 28.614972848026365 25.895351537874518 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 163.0 1 501.5 2 840.0 3 1369.0 4 1898.0 5 1493.5 6 1089.0 7 977.0 8 865.0 9 842.0 10 819.0 11 846.5 12 874.0 13 953.0 14 1032.0 15 986.5 16 941.0 17 1025.0 18 1109.0 19 1269.5 20 1430.0 21 1643.5 22 1857.0 23 2014.5 24 2172.0 25 2843.0 26 4228.0 27 4942.0 28 5962.0 29 6982.0 30 8307.5 31 9633.0 32 11089.0 33 12545.0 34 14079.0 35 15613.0 36 15872.5 37 16132.0 38 17726.0 39 19320.0 40 20938.5 41 22557.0 42 24916.5 43 27276.0 44 30151.0 45 33026.0 46 36483.0 47 39940.0 48 38602.0 49 37264.0 50 36110.5 51 34957.0 52 31922.0 53 28887.0 54 26443.5 55 24000.0 56 22397.0 57 20794.0 58 20190.5 59 19587.0 60 18715.5 61 17844.0 62 16041.0 63 14238.0 64 12270.5 65 10303.0 66 8165.5 67 6028.0 68 5159.0 69 4290.0 70 3461.0 71 2632.0 72 2181.5 73 1731.0 74 1452.0 75 999.0 76 825.0 77 626.0 78 427.0 79 338.5 80 250.0 81 183.5 82 117.0 83 95.0 84 73.0 85 60.0 86 47.0 87 35.5 88 24.0 89 20.0 90 16.0 91 11.0 92 6.0 93 3.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 452085.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.57274128486225 #Duplication Level Percentage of deduplicated Percentage of total 1 72.6364716423661 27.291513568638553 2 9.061442141114927 6.809264424717189 3 4.14753941936415 4.67503276717611 4 2.6317023191560587 3.955210815056904 5 1.8577048674830527 3.4899532184785023 6 1.351433995177513 3.046624791862349 7 1.0093509350916718 2.654685708488323 8 0.7768192783912051 2.334978381766891 9 0.628660460914628 2.125844716857082 >10 5.827199642144627 40.29452219850794 >50 0.0528752204233641 1.2944239061292815 >100 0.01586256612700922 1.0502846086908455 >500 0.0023500097965939585 0.6845171440837142 >1k 5.875024491484896E-4 0.29314374954633104 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG 1328 0.2937500691241691 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC 998 0.22075494652554276 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC 804 0.17784266233119878 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 671 0.14842341595054026 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 628 0.13891193027859805 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.211973412079587E-4 0.0 0.0 0.0663592023623876 0.0 2 2.211973412079587E-4 0.0 0.0 0.337325945342137 0.0 3 2.211973412079587E-4 0.0 0.0 0.45832089098289036 0.0 4 2.211973412079587E-4 0.0 0.0 0.6826149949677605 0.0 5 2.211973412079587E-4 0.0 0.0 1.4862249355762744 0.0 6 2.211973412079587E-4 0.0 0.0 1.8602696395589324 0.0 7 2.211973412079587E-4 0.0 0.0 2.2947012176913635 0.0 8 2.211973412079587E-4 0.0 0.0 2.9470121769136335 0.0 9 2.211973412079587E-4 0.0 0.0 3.1991771458907063 0.0 10 2.211973412079587E-4 0.0 0.0 4.3286107700985434 0.0 11 2.211973412079587E-4 0.0 0.0 5.158543194310805 0.0 12 2.211973412079587E-4 0.0 0.0 6.189101606998684 0.0 13 2.211973412079587E-4 0.0 0.0 6.501211055443114 0.0 14 2.211973412079587E-4 0.0 0.0 6.639901788380504 0.0 15 2.211973412079587E-4 0.0 0.0 6.911310926042669 0.0 16 2.211973412079587E-4 0.0 0.0 7.431124677881372 0.0 17 2.211973412079587E-4 0.0 0.0 8.001592620856698 0.0 18 2.211973412079587E-4 0.0 0.0 8.637534976829578 0.0 19 2.211973412079587E-4 0.0 0.0 9.010916088788612 0.0 20 2.211973412079587E-4 0.0 0.0 9.37522810975812 0.0 21 2.211973412079587E-4 0.0 0.0 9.825364699116317 0.0 22 2.211973412079587E-4 0.0 0.0 10.29629383854806 0.0 23 2.211973412079587E-4 0.0 0.0 10.76324142583806 0.0 24 2.211973412079587E-4 0.0 0.0 11.15785748255306 0.0 25 2.211973412079587E-4 0.0 0.0 11.510446044438545 0.0 26 2.211973412079587E-4 0.0 0.0 11.824988663636264 0.0 27 2.211973412079587E-4 0.0 0.0 12.158775451519073 0.0 28 2.211973412079587E-4 0.0 0.0 12.477963214882157 0.0 29 2.211973412079587E-4 0.0 0.0 12.817279936295165 0.0 30 2.211973412079587E-4 0.0 0.0 13.179158786511387 0.0 31 4.423946824159174E-4 0.0 0.0 13.55806983200062 0.0 32 4.423946824159174E-4 0.0 0.0 13.924593826382207 0.0 33 4.423946824159174E-4 0.0 0.0 14.271431257396285 0.0 34 4.423946824159174E-4 0.0 0.0 14.624019819281772 0.0 35 4.423946824159174E-4 0.0 0.0 15.018193481314354 0.0 36 4.423946824159174E-4 0.0 0.0 15.377860358118495 0.0 37 4.423946824159174E-4 0.0 0.0 15.737748432263844 0.0 38 4.423946824159174E-4 0.0 0.0 16.107147992081135 0.0 39 4.423946824159174E-4 0.0 0.0 16.509284758397204 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 20 7.0287404E-4 45.0 1 GCGCGAC 20 7.0287404E-4 45.0 9 ACTCTTA 20 7.0287404E-4 45.0 5 GGTCCGA 20 7.0287404E-4 45.0 11 CTAAGCG 20 7.0287404E-4 45.0 1 CGTTCGG 20 7.0287404E-4 45.0 2 CTAACGG 35 1.2097371E-7 45.0 2 GCGATCA 25 3.8870377E-5 45.0 9 ATCGATG 20 7.0287404E-4 45.0 2 TTTACGG 30 2.1625692E-6 44.999996 2 CGAATAT 120 0.0 44.999996 14 GCTACGA 135 0.0 40.000004 10 TATTGCG 40 3.4520235E-7 39.375 1 TACGGCT 185 0.0 38.918922 7 CATGCGG 35 6.2398813E-6 38.571426 2 GCGCGTC 35 6.2398813E-6 38.571426 22 AGCGCGT 35 6.2398813E-6 38.571426 21 CACAACG 90 0.0 37.5 12 CGCATGG 30 1.13882656E-4 37.499996 2 ATACTCG 30 1.13882656E-4 37.499996 44 >>END_MODULE