##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936267.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 741487 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.887836199420892 31.0 31.0 34.0 30.0 34.0 2 32.01597870225641 33.0 31.0 34.0 30.0 34.0 3 31.793280259802263 33.0 31.0 34.0 30.0 34.0 4 35.596773780255084 37.0 35.0 37.0 33.0 37.0 5 31.129322563982914 37.0 35.0 37.0 0.0 37.0 6 33.37798100303849 37.0 35.0 37.0 17.0 37.0 7 29.597371228355993 35.0 32.0 37.0 0.0 37.0 8 32.66032985069192 35.0 35.0 37.0 17.0 37.0 9 36.53099919486114 39.0 35.0 39.0 32.0 39.0 10 36.845556294311294 38.0 37.0 39.0 33.0 39.0 11 36.98898160048659 39.0 37.0 39.0 33.0 39.0 12 37.0094553242336 39.0 37.0 39.0 33.0 39.0 13 36.85241683266194 39.0 37.0 39.0 33.0 39.0 14 38.03177264065317 40.0 37.0 41.0 33.0 41.0 15 38.14599311923203 40.0 37.0 41.0 33.0 41.0 16 38.20287206653657 40.0 37.0 41.0 33.0 41.0 17 38.1961153735669 40.0 37.0 41.0 33.0 41.0 18 38.08692262979661 40.0 37.0 41.0 33.0 41.0 19 37.98201856539629 40.0 37.0 41.0 33.0 41.0 20 37.85316937451365 40.0 36.0 41.0 33.0 41.0 21 37.76169103436742 40.0 36.0 41.0 33.0 41.0 22 37.742988076662165 40.0 36.0 41.0 33.0 41.0 23 37.698811981868865 39.0 36.0 41.0 33.0 41.0 24 37.639203384550235 39.0 36.0 41.0 33.0 41.0 25 37.48498355331921 39.0 35.0 41.0 33.0 41.0 26 37.337482653101134 39.0 35.0 41.0 32.0 41.0 27 37.29709624039262 39.0 35.0 41.0 32.0 41.0 28 37.159625185606764 39.0 35.0 41.0 32.0 41.0 29 37.11280440520198 39.0 35.0 41.0 32.0 41.0 30 36.971860599039495 39.0 35.0 41.0 31.0 41.0 31 36.82785537710034 39.0 35.0 41.0 31.0 41.0 32 36.691206993514385 39.0 35.0 41.0 31.0 41.0 33 36.49802761208221 39.0 35.0 41.0 30.0 41.0 34 36.2827750183078 39.0 35.0 41.0 30.0 41.0 35 36.11136540492281 39.0 35.0 41.0 29.0 41.0 36 35.94759314728377 39.0 35.0 40.0 28.0 41.0 37 35.834775255668674 39.0 35.0 40.0 27.0 41.0 38 35.67867406980837 39.0 35.0 40.0 27.0 41.0 39 35.65389143707172 39.0 35.0 40.0 26.0 41.0 40 35.542631226171196 39.0 35.0 40.0 26.0 41.0 41 35.422348604898 38.0 35.0 40.0 25.0 41.0 42 35.37392698725669 38.0 35.0 40.0 25.0 41.0 43 35.26019067090859 38.0 34.0 40.0 25.0 41.0 44 35.0180286370496 38.0 34.0 40.0 24.0 41.0 45 34.94446564808284 38.0 34.0 40.0 24.0 41.0 46 34.90535774733745 38.0 34.0 40.0 23.0 41.0 47 34.79158232039132 38.0 34.0 40.0 23.0 41.0 48 34.68732560382043 38.0 34.0 40.0 23.0 41.0 49 34.55684995151635 38.0 34.0 40.0 23.0 41.0 50 34.40357956376848 37.0 33.0 40.0 23.0 41.0 51 32.47713715817 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 15.0 9 33.0 10 59.0 11 37.0 12 21.0 13 22.0 14 31.0 15 70.0 16 124.0 17 196.0 18 389.0 19 713.0 20 1260.0 21 1940.0 22 2906.0 23 4125.0 24 6041.0 25 8349.0 26 10449.0 27 11443.0 28 12366.0 29 13586.0 30 15705.0 31 19937.0 32 25628.0 33 35517.0 34 49793.0 35 60084.0 36 72484.0 37 113332.0 38 140495.0 39 134325.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.894967814675105 20.608992470535558 25.645493447626187 13.850546267163146 2 32.84076457173221 24.384378957419347 25.709553909913456 17.065302560934985 3 32.14028027463732 23.38813762075397 28.473189685051793 15.998392419556918 4 27.76865946402297 25.236989994430107 28.63772392503173 18.356626616515193 5 21.53051907855431 38.65947750938317 23.33122495741665 16.478778454645866 6 25.153509097259963 34.39318558518221 26.494598017227545 13.958707300330284 7 68.84247464891496 19.061966022330804 8.20810074890052 3.887458579853726 8 83.4191293980879 4.45105578385056 8.914384203634048 3.2154306144274956 9 77.43358953022778 6.866607236539549 10.867351686543392 4.8324515466892874 10 40.209201240210554 27.908648432137046 18.520216807577206 13.361933520075201 11 29.619265071403817 25.690672931555103 26.799390953583814 17.890671043457267 12 26.14961556979421 23.544849741128303 30.959409942453476 19.346124746624014 13 24.3269268375575 23.510998844214395 32.49834454279036 19.663729775437737 14 20.631919372827845 26.2727465215169 32.6004366900566 20.494897415598658 15 20.37945371935044 25.703754752274822 34.56244006975172 19.354351458623007 16 24.23535409251949 25.48527485984245 31.175866872918878 19.10350417471918 17 24.77980058989571 24.818911187923725 29.768020208041406 20.633268014139155 18 25.159982575554256 24.7641563506845 30.51934828257272 19.556512791188517 19 24.834555427134934 26.760415219686926 28.666854577356045 19.7381747758221 20 25.05451882500974 26.739241551099347 29.10718596549906 19.099053658391853 21 25.322493853567224 26.017988177810263 30.127163389243506 18.532354579379003 22 23.65355023081996 23.971559852027074 31.047206491819818 21.32768342533315 23 22.623323133109547 24.82538466621802 31.562792065133983 20.98850013553845 24 22.207537016832394 25.51737252305165 30.79069491440848 21.48439554570748 25 22.888735743175538 26.544902338139444 29.203209226864395 21.363152691820623 26 21.921625058834476 27.195082314322438 28.755999768033696 22.12729285880939 27 21.16881347886072 26.870059758296506 30.39581273845664 21.565314024386133 28 20.72564994396395 26.777408100209442 30.615506408069194 21.881435547757413 29 22.00200408098861 26.225544075621016 30.6207661091833 21.151685734207074 30 23.390430310983202 25.40111964201665 30.250294340966192 20.958155706033956 31 23.503041860477662 25.91710980772421 29.853658931309653 20.72618940048848 32 24.06475096663866 26.344224511016378 28.9360433830937 20.654981139251262 33 24.148501592071067 25.5648446972098 28.928490991750362 21.358162718968778 34 22.154940005691266 26.035385650726177 30.36883991223042 21.440834431352133 35 22.198635984177738 27.138169650985116 29.16639131906561 21.496803045771536 36 23.282808734340588 27.18955288494606 28.577439658416125 20.950198722297223 37 22.66297318766209 27.758949246581533 28.365568108409185 21.212509457347196 38 22.509228078172644 27.227045113400507 28.450937103415164 21.81278970501169 39 22.651240008253684 26.2727465215169 28.043782291530402 23.03223117869902 40 23.13607655966996 25.62728678992349 29.14589197113368 22.090744679272866 41 21.4528373390228 26.747603127229475 28.737523382068737 23.062036151678992 42 21.849472748679343 26.589946957937226 29.488716592468915 22.071863700914513 43 22.30248136514868 25.7127906490606 29.679953930412807 22.30477405537791 44 22.134036065365947 25.8233792365881 29.234902297680204 22.80768240036575 45 22.127562587071655 25.80706067672124 28.28950473845125 23.77587199775586 46 22.071998565045643 26.240513994176567 28.6671243056183 23.02036313515948 47 21.211430544298146 26.480707011721044 29.758849447124497 22.549012996856316 48 21.496533317509275 25.830527035538047 29.86404346940675 22.808896177545932 49 22.23437497892748 25.603146110451025 29.805512436495853 22.35696647412564 50 20.96705673868861 26.005445813615076 30.038962247483774 22.988535200212546 51 21.315006197006824 25.504695294725327 29.120402650349902 24.05989585791794 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 240.0 1 668.0 2 1096.0 3 4939.5 4 8783.0 5 6890.5 6 4998.0 7 4101.5 8 3205.0 9 2995.5 10 2786.0 11 2687.5 12 2589.0 13 2526.5 14 2464.0 15 2437.5 16 2411.0 17 2287.0 18 2163.0 19 2262.5 20 2362.0 21 2914.0 22 3466.0 23 3916.0 24 4366.0 25 4865.0 26 6364.0 27 7364.0 28 8886.5 29 10409.0 30 12878.5 31 15348.0 32 17526.5 33 19705.0 34 21763.5 35 23822.0 36 26034.0 37 28246.0 38 30729.5 39 33213.0 40 35297.0 41 37381.0 42 40615.5 43 43850.0 44 46532.5 45 49215.0 46 52604.0 47 55993.0 48 57276.0 49 58559.0 50 57349.5 51 56140.0 52 51971.5 53 47803.0 54 44339.0 55 40875.0 56 37876.0 57 34877.0 58 33447.0 59 32017.0 60 29346.0 61 26675.0 62 24236.0 63 21797.0 64 19276.5 65 16756.0 66 14441.0 67 12126.0 68 10157.0 69 8188.0 70 6801.0 71 5414.0 72 4651.5 73 3889.0 74 3049.0 75 1871.5 76 1534.0 77 1137.0 78 740.0 79 584.5 80 429.0 81 346.5 82 264.0 83 223.5 84 183.0 85 125.5 86 68.0 87 60.5 88 53.0 89 39.0 90 25.0 91 19.0 92 13.0 93 10.5 94 8.0 95 6.5 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 741487.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.223087962849526 #Duplication Level Percentage of deduplicated Percentage of total 1 74.34903285117353 29.161986554743685 2 8.391688857121338 6.582959003994689 3 3.934685792389906 4.629915808232507 4 2.4791505466674524 3.8895975986033586 5 1.6936274515292196 3.321464925381363 6 1.227477379486217 2.888727193679755 7 0.9604138699972703 2.636927839255056 8 0.807829700735605 2.5348460328764038 9 0.6326916104055784 2.233450681946543 >10 5.476007274076704 39.69264896933725 >50 0.036783921465078 0.9321184378428018 >100 0.009195978958472118 0.603608693507566 >500 7.073829968055291E-4 0.17687912760793698 >1k 7.073829968055291E-4 0.7148691329911366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3853 0.5196314972480974 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1300 0.17532337047041957 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 746 0.10060864182379463 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.062172364451433405 0.0 2 0.0 0.0 0.0 0.19771081623818085 0.0 3 0.0 0.0 0.0 0.32353905058348964 0.0 4 0.0 0.0 0.0 0.4542223936495178 0.0 5 1.34864131131092E-4 0.0 0.0 0.8433054119627181 0.0 6 1.34864131131092E-4 0.0 0.0 1.2394013650947353 0.0 7 1.34864131131092E-4 0.0 0.0 1.5843838125280687 0.0 8 1.34864131131092E-4 0.0 0.0 2.1916769950113757 0.0 9 1.34864131131092E-4 0.0 0.0 2.520340882577847 0.0 10 1.34864131131092E-4 0.0 0.0 3.130735940077169 0.0 11 1.34864131131092E-4 0.0 0.0 3.8262302643202104 0.0 12 1.34864131131092E-4 0.0 0.0 4.380386979137867 0.0 13 1.34864131131092E-4 0.0 0.0 4.657263040349999 0.0 14 1.34864131131092E-4 0.0 0.0 4.814784345511115 0.0 15 2.69728262262184E-4 0.0 0.0 4.990647172506058 0.0 16 2.69728262262184E-4 0.0 0.0 5.340754456922373 0.0 17 2.69728262262184E-4 0.0 0.0 5.760047040608939 0.0 18 2.69728262262184E-4 0.0 0.0 6.227755847371566 0.0 19 2.69728262262184E-4 0.0 0.0 6.508812696648762 0.0 20 2.69728262262184E-4 0.0 0.0 6.8105037579890135 0.0 21 2.69728262262184E-4 0.0 0.0 7.170456123977899 0.0 22 2.69728262262184E-4 0.0 0.0 7.5577859085863945 0.0 23 2.69728262262184E-4 0.0 0.0 7.9372935735892876 0.0 24 2.69728262262184E-4 0.0 0.0 8.24775080345306 0.0 25 2.69728262262184E-4 0.0 0.0 8.526784690763291 0.0 26 2.69728262262184E-4 0.0 0.0 8.784510045354807 0.0 27 2.69728262262184E-4 0.0 0.0 9.084582737121487 0.0 28 2.69728262262184E-4 0.0 0.0 9.388296760428705 0.0 29 4.0459239339327597E-4 0.0 0.0 9.688639180457647 0.0 30 4.0459239339327597E-4 0.0 0.0 10.053176926904989 0.0 31 4.0459239339327597E-4 0.0 0.0 10.367005760047041 0.0 32 4.0459239339327597E-4 0.0 0.0 10.679890544271174 0.0 33 4.0459239339327597E-4 0.0 0.0 10.997090980691503 0.0 34 4.0459239339327597E-4 0.0 0.0 11.325889732389104 0.0 35 4.0459239339327597E-4 0.0 0.0 11.678019978772387 0.0 36 4.0459239339327597E-4 0.0 0.0 12.011404110928446 0.0 37 4.0459239339327597E-4 0.0 0.0 12.348429574625044 0.0 38 4.0459239339327597E-4 0.0 0.0 12.736433679889196 0.0 39 4.0459239339327597E-4 0.0 0.0 13.26442675326742 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 20 7.031665E-4 45.0 1 CGATTGT 25 3.889462E-5 45.0 10 TAACGCG 20 7.031665E-4 45.0 1 CGTACGT 20 7.031665E-4 45.0 21 GTATACG 20 7.031665E-4 45.0 1 TAGTACG 20 7.031665E-4 45.0 1 TATACGG 75 0.0 42.000004 2 CGTTATT 330 0.0 41.590908 1 CGTTTTA 285 0.0 40.263157 1 CGTTTTT 1735 0.0 39.553314 1 ATCGTTG 40 3.456007E-7 39.375 23 CCCCGAT 40 3.456007E-7 39.375 40 TATCGCG 35 6.2452873E-6 38.57143 32 TGTAACG 65 9.094947E-12 38.07692 1 GACCGAC 30 1.1395314E-4 37.499996 9 GCGATAT 60 1.546141E-10 37.499996 9 TTACGGG 195 0.0 36.923077 3 ACGGGAC 220 0.0 36.81818 5 CGGTTTT 545 0.0 36.74312 1 TACGGGA 255 0.0 36.17647 4 >>END_MODULE