SRR2936262.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936262.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	468456
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG	3936	0.8402069778164866	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC	3783	0.8075464931605103	No Hit
GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC	2827	0.6034718308656523	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1393	0.2973598374233653	No Hit
GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTT	1013	0.21624229383335894	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG	825	0.17611045647830317	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCT	734	0.15668493946069642	No Hit
GAATATGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC	667	0.14238263572245846	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC	646	0.13789982410301074	No Hit
GAACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCT	622	0.13277661082364192	No Hit
GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC	563	0.12018204484519357	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG	537	0.11463189712587735	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC	513	0.10950868384650853	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTC	499	0.10652014276687671	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	483	0.1031046672472975	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGT	20	7.029001E-4	45.000004	32
CACGGTC	20	7.029001E-4	45.000004	33
AATTCGT	20	7.029001E-4	45.000004	13
ACTCGAT	20	7.029001E-4	45.000004	32
TATCCGG	20	7.029001E-4	45.000004	2
ACGGTCT	20	7.029001E-4	45.000004	30
CGGTTTA	25	3.8872546E-5	45.0	1
CTAACGG	35	1.2098644E-7	45.0	2
TACGGCT	675	0.0	42.0	7
TAATACG	135	0.0	41.666668	4
TGATACC	845	0.0	40.473373	4
GATACCT	845	0.0	40.473373	5
ACGGCTG	840	0.0	40.17857	8
TTAACGG	40	3.452369E-7	39.375004	2
CGTTATT	145	0.0	38.793102	1
TACGGGA	140	0.0	38.571426	4
GCGATAA	35	6.240367E-6	38.571426	9
ATACCTG	1005	0.0	38.50746	6
ATGATAC	1715	0.0	38.30904	3
GAATGAT	1800	0.0	37.875	1