SRR2936261.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936261.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	334858
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCG	836	0.2496580640151945	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGC	717	0.21412061231925175	No Hit
GAATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC	628	0.18754218205926093	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	493	0.14722658559747714	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTCC	20	7.0261175E-4	45.000004	25
ACGCCGG	30	2.1608776E-6	45.000004	27
TCACCGG	20	7.0261175E-4	45.000004	2
TCGGGAA	40	6.7902874E-9	45.000004	5
GTTCGCT	20	7.0261175E-4	45.000004	21
TGCGATG	20	7.0261175E-4	45.000004	1
GTAGACG	30	2.1608776E-6	45.000004	1
TCGCTGC	20	7.0261175E-4	45.000004	21
CTGCCGA	20	7.0261175E-4	45.000004	42
ACTCGTT	20	7.0261175E-4	45.000004	23
TGTAGCG	20	7.0261175E-4	45.000004	1
TTACGCG	20	7.0261175E-4	45.000004	1
ATTATCG	20	7.0261175E-4	45.000004	30
TTCGCGC	20	7.0261175E-4	45.000004	34
TATCGCG	20	7.0261175E-4	45.000004	32
AGTACGT	20	7.0261175E-4	45.000004	39
GTAACGG	30	2.1608776E-6	45.000004	2
TCACGGA	25	3.8848655E-5	45.0	14
ATCCGCA	25	3.8848655E-5	45.0	11
GGCGATA	95	0.0	42.63158	8