##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936260.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 648412 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.82739369413274 31.0 31.0 34.0 30.0 34.0 2 31.95512883783767 33.0 31.0 34.0 30.0 34.0 3 31.678762885325998 33.0 31.0 34.0 30.0 34.0 4 35.542668858688614 37.0 35.0 37.0 33.0 37.0 5 31.123003584140946 37.0 35.0 37.0 0.0 37.0 6 33.37120380252062 37.0 35.0 37.0 17.0 37.0 7 29.556733990117394 35.0 32.0 37.0 0.0 37.0 8 32.62284627674997 35.0 33.0 37.0 17.0 37.0 9 36.48489694823662 39.0 35.0 39.0 32.0 39.0 10 36.83423039672307 38.0 37.0 39.0 33.0 39.0 11 37.010366865511436 39.0 37.0 39.0 34.0 39.0 12 37.09486869459541 39.0 37.0 39.0 34.0 39.0 13 36.96209354546183 39.0 37.0 39.0 33.0 39.0 14 38.24469010443977 40.0 38.0 41.0 33.0 41.0 15 38.31665206689574 40.0 38.0 41.0 34.0 41.0 16 38.333918866399756 40.0 38.0 41.0 34.0 41.0 17 38.29410775864728 40.0 37.0 41.0 34.0 41.0 18 38.16997217818301 40.0 37.0 41.0 33.0 41.0 19 38.04818541297817 40.0 37.0 41.0 34.0 41.0 20 37.93440590242007 40.0 36.0 41.0 33.0 41.0 21 37.832279476629054 40.0 36.0 41.0 33.0 41.0 22 37.796445778301454 40.0 36.0 41.0 33.0 41.0 23 37.743112403842005 39.0 36.0 41.0 33.0 41.0 24 37.67745353263049 39.0 36.0 41.0 33.0 41.0 25 37.54221544326755 39.0 36.0 41.0 33.0 41.0 26 37.37704885165605 39.0 35.0 41.0 32.0 41.0 27 37.34736864832853 39.0 35.0 41.0 32.0 41.0 28 37.22720276614251 39.0 35.0 41.0 32.0 41.0 29 37.19329068555178 39.0 35.0 41.0 32.0 41.0 30 37.07265288119282 39.0 35.0 41.0 32.0 41.0 31 36.93120577657415 39.0 35.0 41.0 31.0 41.0 32 36.823251266170274 39.0 35.0 41.0 31.0 41.0 33 36.61000104871594 39.0 35.0 41.0 30.0 41.0 34 36.38730621888552 39.0 35.0 41.0 30.0 41.0 35 36.222114951604844 39.0 35.0 41.0 29.0 41.0 36 35.99138664922919 39.0 35.0 40.0 28.0 41.0 37 35.83437382405014 39.0 35.0 40.0 27.0 41.0 38 35.67260322140861 39.0 35.0 40.0 26.0 41.0 39 35.565822347519784 39.0 35.0 40.0 26.0 41.0 40 35.354012572253446 39.0 35.0 40.0 25.0 41.0 41 35.194342485950294 38.0 34.0 40.0 24.0 41.0 42 35.03656163056822 38.0 34.0 40.0 23.0 41.0 43 34.79928039579773 38.0 34.0 40.0 23.0 41.0 44 34.55128529391806 38.0 34.0 40.0 21.0 41.0 45 34.36340474883253 38.0 33.0 40.0 20.0 41.0 46 34.147261309167625 38.0 33.0 40.0 20.0 41.0 47 33.98948199601488 38.0 33.0 40.0 18.0 41.0 48 33.88769023398703 38.0 33.0 40.0 18.0 41.0 49 33.68593887836746 37.0 33.0 40.0 17.0 41.0 50 33.50915158880465 37.0 33.0 40.0 15.0 41.0 51 31.526492415316188 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 22.0 10 45.0 11 29.0 12 21.0 13 22.0 14 21.0 15 39.0 16 84.0 17 141.0 18 311.0 19 532.0 20 943.0 21 1565.0 22 2326.0 23 3454.0 24 5363.0 25 7674.0 26 10001.0 27 11123.0 28 12337.0 29 13327.0 30 15252.0 31 18962.0 32 23369.0 33 31246.0 34 43205.0 35 52902.0 36 63151.0 37 97469.0 38 119687.0 39 113756.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.491422120503636 21.548182328519523 25.18553018759678 14.774865363380075 2 33.197411522303724 24.64204857405477 25.365354126697227 16.795185776944287 3 30.808035631666286 24.10257675675342 28.87377161434397 16.215615997236323 4 27.046692534993184 25.990573894375796 28.817326021110034 18.145407549520982 5 21.206270087536936 39.09366267126457 23.353670197343664 16.346397043854832 6 24.818325385711553 33.939994941487825 26.68982066957428 14.551859003226344 7 67.51664065439876 19.147393940889433 9.165623091491213 4.170342313220607 8 81.35136302227596 4.8970407703743914 9.873660573832685 3.8779356335169615 9 74.6445161409721 7.947107703127024 11.91942777123187 5.488948384669007 10 35.9066457746001 32.31217189071146 18.25120448110152 13.529977853586917 11 27.244252111311944 26.13723990302462 28.950574634645875 17.667933351017563 12 26.8118110090498 22.224604109732702 31.565270229422033 19.398314651795463 13 23.434174568021565 23.391763261629954 32.57327131515147 20.600790855197005 14 19.34433662547886 26.823994620704124 31.32545356964399 22.506215184173026 15 19.100355946527824 26.221137178213848 34.5624386963844 20.116068178873924 16 21.838584110102836 25.694774310160824 32.649611666656384 19.817029913079956 17 21.767950007094257 25.017118745488983 30.81682633880928 22.39810490860749 18 22.184043478529084 26.04439769776007 30.96457190798443 20.806986915726423 19 22.958551044706144 27.36423755266713 28.67436136283721 21.002850039789518 20 24.348253887960126 26.370887645509338 29.529219076759837 19.751639389770702 21 23.708382941709903 26.757216091003865 29.764409048567884 19.769991918718347 22 22.761762583049048 24.69062879773971 29.325644806080085 23.221963813131158 23 21.74173210859762 26.580168164685414 30.198700826018026 21.479398900698936 24 21.41076969581069 25.419949044743156 31.71687137190552 21.45240988754064 25 21.615577749949104 27.703219557935387 28.74052300080813 21.94067969130738 26 21.188071781521625 27.986064415834377 28.98620013201483 21.839663670629168 27 21.827325836042515 27.22435735304097 29.52829373916584 21.420023071750677 28 20.296354786771374 27.319975571087518 30.95331363392411 21.430356008216997 29 20.999919804075187 25.218533895116067 31.448677692578176 22.33286860823057 30 21.67958026686736 25.7714231075304 30.85630740948656 21.692689216115678 31 21.34275738265177 27.23762052522162 29.52011992375218 21.89950216837443 32 22.812656150718986 26.80533364589181 28.908625997051256 21.473384206337943 33 21.85385218040382 26.245195955657824 28.508417487646742 23.392534376291618 34 20.572413835647705 26.607928292505385 30.740485987304368 22.079171884542546 35 21.5090097037069 24.734736556386988 30.281518540680924 23.474735199225183 36 20.50794864993245 27.262758863191923 29.17065075908527 23.058641727790356 37 21.628532476265093 26.981456234616264 29.592604701948762 21.797406587169885 38 21.374835752577066 26.961715699277622 27.98513907824038 23.67830946990494 39 21.41678439017168 25.057525153760263 28.875159620734962 24.65053083533309 40 21.651203247318062 24.92211741917176 30.61402318279119 22.812656150718986 41 20.007341011579058 25.267422564665676 30.306965324515893 24.418271099239373 42 21.162008105957323 26.006613079338447 29.320092780516095 23.51128603418814 43 21.50793014318057 25.82200822933567 29.191779300814915 23.478282326668847 44 21.69623634355934 26.371350314306337 28.416654842908525 23.5157584992258 45 21.417863950698013 25.339136228200587 28.890890359832945 24.352109461268455 46 21.263024126635536 26.76662368987619 28.468782194037125 23.501569989451152 47 20.792181514222438 25.70834592820614 30.2488232790263 23.250649278545122 48 20.83536393527572 25.130626823686175 29.977853586916957 24.056155654121145 49 21.027371486030486 25.27929773045533 29.613733243678404 24.079597539835785 50 19.453526461570732 25.088523963159226 30.79199644670364 24.665953128566407 51 19.54667711269995 24.407012825179052 29.502075840669207 26.544234221451795 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 316.0 1 687.5 2 1059.0 3 4838.5 4 8618.0 5 6912.0 6 5206.0 7 4127.0 8 3048.0 9 2911.5 10 2775.0 11 2713.0 12 2651.0 13 2649.0 14 2647.0 15 2539.5 16 2432.0 17 2430.5 18 2429.0 19 2398.5 20 2368.0 21 2617.5 22 2867.0 23 3105.0 24 3343.0 25 4100.0 26 5696.5 27 6536.0 28 7852.5 29 9169.0 30 10984.0 31 12799.0 32 14709.5 33 16620.0 34 18523.0 35 20426.0 36 21876.5 37 23327.0 38 25802.0 39 28277.0 40 30861.5 41 33446.0 42 36090.5 43 38735.0 44 42020.5 45 45306.0 46 50020.5 47 54735.0 48 54750.5 49 54766.0 50 52005.0 51 49244.0 52 44784.0 53 40324.0 54 36441.0 55 32558.0 56 30409.0 57 28260.0 58 26544.5 59 24829.0 60 23822.0 61 22815.0 62 20893.5 63 18972.0 64 16149.0 65 13326.0 66 11145.0 67 8964.0 68 7589.0 69 6214.0 70 5401.0 71 4588.0 72 4145.5 73 3703.0 74 3052.5 75 1884.0 76 1366.0 77 1097.0 78 828.0 79 658.0 80 488.0 81 419.5 82 351.0 83 270.5 84 190.0 85 159.5 86 129.0 87 85.5 88 42.0 89 30.5 90 19.0 91 22.0 92 25.0 93 18.0 94 11.0 95 8.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 648412.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.95783954210356 #Duplication Level Percentage of deduplicated Percentage of total 1 76.540875863883 32.880306637727536 2 8.373031241420504 7.193746650999245 3 3.6410134773675566 4.692302181941761 4 2.1907071967499228 3.764321929668587 5 1.505389820482334 3.233414717829809 6 1.0899481786443042 2.8093091380446027 7 0.8627119313235398 2.5942168501798424 8 0.669280267793324 2.3000667482049373 9 0.5364953533879517 2.0742013175331397 >10 4.534388354406622 35.212747384843944 >50 0.04174927351583968 1.2147904435460615 >100 0.012931190663578252 0.9970359878643704 >500 7.389251807758995E-4 0.2277533655818801 >1k 7.389251807758995E-4 0.8057866460342894 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3833 0.5911364996329495 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1244 0.1918533278224339 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 738 0.1138165240618619 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 697 0.1074933838362029 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08682751090356132 0.0 2 0.0 0.0 0.0 0.3109134315836228 0.0 3 0.0 0.0 0.0 0.4916627082780701 0.0 4 0.0 0.0 0.0 0.7001721127924838 0.0 5 0.0 0.0 0.0 1.364872951148344 0.0 6 0.0 0.0 0.0 2.0044354515339013 0.0 7 0.0 0.0 0.0 2.559946453797894 0.0 8 0.0 0.0 0.0 3.59354854629464 0.0 9 0.0 0.0 0.0 4.120682529009334 0.0 10 0.0 0.0 0.0 5.093675009099153 0.0 11 0.0 0.0 0.0 6.0404495906923374 0.0 12 0.0 0.0 0.0 6.850891100103021 0.0 13 0.0 0.0 0.0 7.246627144469874 0.0 14 0.0 0.0 0.0 7.4289186504876525 0.0 15 0.0 0.0 0.0 7.689709629063003 0.0 16 0.0 0.0 0.0 8.136030795235127 0.0 17 0.0 0.0 0.0 8.683213759153132 0.0 18 0.0 0.0 0.0 9.307353966305374 0.0 19 0.0 0.0 0.0 9.68119035428092 0.0 20 0.0 0.0 0.0 10.06597657045212 0.0 21 0.0 0.0 0.0 10.535893845271216 0.0 22 0.0 0.0 0.0 11.02431787197029 0.0 23 0.0 0.0 0.0 11.524462841526683 0.0 24 0.0 0.0 0.0 11.934387395668185 0.0 25 0.0 0.0 0.0 12.290179700560754 0.0 26 0.0 0.0 0.0 12.624535017859015 0.0 27 0.0 0.0 0.0 12.98510823365391 0.0 28 0.0 0.0 0.0 13.36835222050178 0.0 29 0.0 0.0 0.0 13.767481169379963 0.0 30 0.0 0.0 0.0 14.194061800213445 0.0 31 0.0 0.0 0.0 14.58594227127197 0.0 32 0.0 0.0 0.0 14.980444532180156 0.0 33 0.0 0.0 0.0 15.356440041208367 0.0 34 0.0 0.0 0.0 15.76096679271821 0.0 35 0.0 0.0 0.0 16.163642869040054 0.0 36 0.0 0.0 0.0 16.593616404384868 0.0 37 0.0 0.0 0.0 17.001381837473705 0.0 38 0.0 0.0 0.0 17.37768579236658 0.0 39 0.0 0.0 0.0 17.798560174703738 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTGCG 45 3.8380676E-10 45.000004 1 CGCATCG 25 3.8889186E-5 45.0 21 TTCACGG 55 1.8189894E-12 45.0 2 CGCGATC 20 7.0310105E-4 45.0 39 GAATACG 20 7.0310105E-4 45.0 1 TAGTTCG 20 7.0310105E-4 45.0 1 ACGTATA 20 7.0310105E-4 45.0 32 ATCGCAT 20 7.0310105E-4 45.0 13 CGTTATT 390 0.0 42.692307 1 CGGTTTT 455 0.0 41.538464 1 CGTTTTT 1730 0.0 40.83815 1 ATAACGG 50 1.0804797E-9 40.5 2 CGTTTTA 250 0.0 40.499996 1 TACGGGT 45 1.9261279E-8 40.000004 4 TATCGCG 45 1.9261279E-8 40.000004 32 AACACGT 85 0.0 39.705883 41 CGGGTCA 40 3.4551158E-7 39.375 6 CACAACG 105 0.0 38.57143 12 TTAATCG 70 0.0 38.571426 20 TAACGCC 35 6.2440777E-6 38.571426 12 >>END_MODULE