SRR2936233.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936233.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	593149
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	959	0.1616794431078869	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTCGTC	35	1.210592E-7	45.0	16
CGCGACA	20	7.030523E-4	45.0	21
ATCCGTA	20	7.030523E-4	45.0	45
CCCCGTC	25	3.8885148E-5	45.0	19
CGGATTC	20	7.030523E-4	45.0	18
CGATAGT	20	7.030523E-4	45.0	10
CCGTTAA	20	7.030523E-4	45.0	30
CTTACGA	20	7.030523E-4	45.0	38
ATTGCGG	70	0.0	41.785713	2
TAACGGG	165	0.0	40.90909	3
ACGGGTC	40	3.4544428E-7	39.375	5
CGCACGG	40	3.4544428E-7	39.375	2
ACGACCA	155	0.0	39.193546	28
TAATGGG	325	0.0	38.76923	3
GATAACG	35	6.2431754E-6	38.571426	1
AATTGCG	35	6.2431754E-6	38.571426	1
TACGAAT	140	0.0	38.571426	12
GCGAGAC	160	0.0	37.96875	21
CGCATAG	30	1.13925555E-4	37.500004	2
CGATTCG	30	1.13925555E-4	37.500004	10