##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936228.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 998909 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00324053542415 33.0 31.0 34.0 30.0 34.0 2 32.14717456745309 33.0 31.0 34.0 30.0 34.0 3 31.959408714907966 33.0 31.0 34.0 30.0 34.0 4 35.7432398747033 37.0 35.0 37.0 35.0 37.0 5 31.222658920882683 37.0 35.0 37.0 0.0 37.0 6 33.462994126592115 37.0 35.0 37.0 17.0 37.0 7 29.600993684109362 35.0 32.0 37.0 0.0 37.0 8 32.69320528696808 35.0 35.0 37.0 17.0 37.0 9 36.63328191056443 39.0 35.0 39.0 32.0 39.0 10 36.946575714104085 38.0 37.0 39.0 34.0 39.0 11 37.024716966210136 39.0 37.0 39.0 34.0 39.0 12 36.97947060242725 39.0 37.0 39.0 33.0 39.0 13 36.81208198144175 39.0 37.0 39.0 33.0 39.0 14 37.98770959116396 40.0 37.0 41.0 33.0 41.0 15 38.123066265295435 40.0 37.0 41.0 33.0 41.0 16 38.204302894457854 40.0 37.0 41.0 33.0 41.0 17 38.18149701324145 40.0 37.0 41.0 33.0 41.0 18 38.090365588857445 40.0 37.0 41.0 33.0 41.0 19 38.01440471554466 40.0 37.0 41.0 33.0 41.0 20 37.893291581114994 40.0 36.0 41.0 33.0 41.0 21 37.78963248904555 40.0 36.0 41.0 33.0 41.0 22 37.785659154137164 40.0 36.0 41.0 33.0 41.0 23 37.72259535152852 39.0 36.0 41.0 33.0 41.0 24 37.664903409619896 40.0 36.0 41.0 33.0 41.0 25 37.50026879325344 39.0 35.0 41.0 33.0 41.0 26 37.367492934791855 39.0 35.0 41.0 33.0 41.0 27 37.32645015712142 39.0 35.0 41.0 33.0 41.0 28 37.2172580285091 39.0 35.0 41.0 32.0 41.0 29 37.14643375923132 39.0 35.0 41.0 32.0 41.0 30 36.99693966117034 39.0 35.0 41.0 31.0 41.0 31 36.862189648906956 39.0 35.0 41.0 31.0 41.0 32 36.72194864597276 39.0 35.0 41.0 31.0 41.0 33 36.51198958063247 39.0 35.0 41.0 30.0 41.0 34 36.30753952562245 39.0 35.0 40.0 30.0 41.0 35 36.091579913685834 39.0 35.0 40.0 29.0 41.0 36 35.906500992582906 39.0 35.0 40.0 29.0 41.0 37 35.800008809611285 39.0 35.0 40.0 28.0 41.0 38 35.519488762239604 38.0 35.0 40.0 26.0 41.0 39 35.416238115784324 38.0 34.0 40.0 26.0 41.0 40 35.21307546533268 38.0 34.0 40.0 24.0 41.0 41 35.01759019089827 38.0 34.0 40.0 24.0 41.0 42 34.98679259071647 38.0 34.0 40.0 24.0 41.0 43 34.86310264498568 38.0 34.0 40.0 23.0 41.0 44 34.65833023828998 38.0 34.0 40.0 23.0 41.0 45 34.4668363184234 38.0 33.0 40.0 23.0 41.0 46 34.353890094092655 37.0 33.0 40.0 23.0 41.0 47 34.167691951919544 37.0 33.0 40.0 22.0 41.0 48 34.059580001781946 37.0 33.0 40.0 22.0 41.0 49 33.92251446327944 37.0 33.0 40.0 21.0 41.0 50 33.73624624465292 37.0 33.0 40.0 20.0 41.0 51 31.786198742828425 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 26.0 9 52.0 10 44.0 11 37.0 12 24.0 13 35.0 14 35.0 15 61.0 16 111.0 17 284.0 18 520.0 19 883.0 20 1447.0 21 2368.0 22 3711.0 23 5483.0 24 8190.0 25 11257.0 26 14032.0 27 15760.0 28 17516.0 29 19229.0 30 22678.0 31 27949.0 32 36065.0 33 50855.0 34 72977.0 35 84602.0 36 100430.0 37 153713.0 38 182954.0 39 165567.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.94874808415982 19.52500177693864 23.67112519759057 12.855124941310969 2 34.937316612424155 23.00039342923129 24.66941433103516 17.392875627309394 3 33.0744842623302 23.18699701374199 27.129298064188028 16.609220659739776 4 28.077132151176937 25.695834155063174 27.167840113563894 19.059193580195995 5 22.058065349296083 39.24641784186548 22.554206639443635 16.14131016939481 6 26.33933621581145 35.098792782926175 25.080763112555797 13.481107888706578 7 72.21658829783294 18.39306683591799 6.476966370310008 2.9133784959390696 8 87.41707202557991 3.1667549296282247 7.138287872068427 2.2778851727234413 9 81.98264306358237 5.233409649928071 8.864971684107362 3.9189756023821993 10 44.37861707122471 26.228014764107645 16.284866789667525 13.108501375000126 11 32.44549803835985 25.930490164769765 24.559294189961246 17.064717606909138 12 28.306482372268142 23.863334898374124 28.990929103652086 18.839253625705645 13 25.27587598069494 23.832301040435112 31.116948590912685 19.77487438795726 14 22.201421751130486 24.713762715122197 31.725912971051418 21.3589025626959 15 21.882073342016138 25.154043060979532 31.962871492798644 21.00101210420569 16 26.760395591590424 25.511633191812265 28.89162075824725 18.83635045835006 17 26.48809851548039 24.72897931643423 27.83046303517137 20.952459132914008 18 26.552869180275678 24.26427232110232 28.925357565103525 20.257500933518468 19 25.491911675638125 25.914572798923626 27.09295841763364 21.500557107804617 20 26.789427265146276 26.97462932058876 26.890137139619323 19.34580627464564 21 26.93318410385731 25.363972093554064 28.715528641748143 18.987315160840478 22 26.85610000510557 22.548900850828254 29.014154442496764 21.58084470156941 23 24.612251966895883 25.263362328300175 29.62081631059486 20.50356939420908 24 23.864035662908233 24.6081474889104 30.512188797978595 21.01562805020277 25 24.70054829819333 25.82317308183228 28.59920172908643 20.877076890887956 26 23.80617253423485 26.37677706377658 27.486487758144136 22.330562643844434 27 23.56150560261245 25.64908314971634 29.03287486647933 21.75653638119188 28 22.012615763798305 26.80164058988356 28.82705031189027 22.358693334427862 29 23.031827724046934 25.821671443544908 28.969806058409723 22.17669477399843 30 24.45538082047514 24.54137463973195 29.39136598028449 21.611878559508423 31 25.635668514349153 24.736187180213612 27.939982520930336 21.688161784506896 32 25.99355897283937 24.272981823169076 27.66298031151987 22.070478892471687 33 24.98405760684907 24.151249012672828 28.282656378108516 22.582037002369585 34 23.133038144615774 25.00207726629753 30.48035406628632 21.384530522800375 35 23.812179087384337 25.83298378530977 29.207565453910217 21.14727167339567 36 25.51914138324912 26.44915602922789 27.663981403711453 20.36772118381154 37 24.52005137605127 26.44565220655735 27.187261302080568 21.847035115310803 38 24.3350495390471 26.62144399539898 27.994041499275713 21.049464966278208 39 24.62566660226307 24.997071805339626 27.60171346939511 22.775548123002196 40 26.057228436223923 24.857419444614074 28.24441465639012 20.840937462771883 41 22.70947603835785 24.50964001725883 29.160414011686754 23.620469932696572 42 23.215428031982892 24.936305509310657 28.69480603338242 23.15346042532403 43 23.649902043129053 23.977859845090993 29.098446405027882 23.273791706752068 44 23.935113208510487 24.807264725815863 28.403087768755714 22.85453429691794 45 23.34306728640947 24.55969462683788 27.605017073627323 24.49222101312532 46 23.376703984046596 24.89145657912783 28.047199494648662 23.684639942176915 47 22.71157833196017 25.186278229548435 29.631127560168142 22.47101587832325 48 23.207018857573615 25.182574188439588 29.401977557515245 22.20842939647155 49 23.873345820289938 24.85541726023091 29.060204683309493 22.21103223616966 50 22.925511733301033 25.68992771113285 28.92585811119932 22.458702444366804 51 22.81489104613133 24.994869402518148 28.392476191524953 23.79776335982557 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 325.0 1 912.0 2 1499.0 3 6037.5 4 10576.0 5 7733.0 6 4890.0 7 3916.0 8 2942.0 9 2854.5 10 2767.0 11 2774.5 12 2782.0 13 2841.5 14 2901.0 15 2715.5 16 2530.0 17 2652.0 18 2774.0 19 2736.5 20 2699.0 21 2994.0 22 3289.0 23 3805.5 24 4322.0 25 5607.0 26 7569.0 27 8246.0 28 10259.5 29 12273.0 30 14256.5 31 16240.0 32 18428.0 33 20616.0 34 23856.0 35 27096.0 36 29182.5 37 31269.0 38 33808.5 39 36348.0 40 40209.0 41 44070.0 42 47136.0 43 50202.0 44 53842.5 45 57483.0 46 62882.5 47 68282.0 48 71133.5 49 73985.0 50 75635.5 51 77286.0 52 73826.0 53 70366.0 54 67374.0 55 64382.0 56 62131.0 57 59880.0 58 57111.0 59 54342.0 60 49444.5 61 44547.0 62 40882.0 63 37217.0 64 33414.0 65 29611.0 66 25554.5 67 21498.0 68 18501.0 69 15504.0 70 12883.5 71 10263.0 72 8508.5 73 6754.0 74 5618.0 75 3542.5 76 2603.0 77 1918.0 78 1233.0 79 1023.0 80 813.0 81 583.5 82 354.0 83 297.5 84 241.0 85 176.5 86 112.0 87 87.0 88 62.0 89 45.0 90 28.0 91 24.0 92 20.0 93 14.0 94 8.0 95 5.0 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 998909.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.55618011078598 #Duplication Level Percentage of deduplicated Percentage of total 1 72.52573595132078 24.336866582498264 2 8.051007239117137 5.4032209797811275 3 3.9225013409280285 3.948724844429414 4 2.695702090165305 3.6182985945043677 5 1.9103947620408865 3.2052775358873054 6 1.4214354825194704 2.86187670403712 7 1.1166765141694683 2.6229978764468735 8 0.8901949368587712 2.389723330795414 9 0.665194955615574 2.008926156548024 >10 6.67798138429996 45.20717674008474 >50 0.10199059269575948 2.119964271260449 >100 0.018763635952620976 1.1606627813399035 >500 0.001513196447622978 0.3341132689095032 >1k 6.052785790491912E-4 0.25063572877466683 >5k 3.026392895245956E-4 0.5315346047028389 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5234 0.5239716530735031 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1397 0.13985257916386779 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1071 0.10721697371832668 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0010921915810148E-4 0.0 0.0 0.05015471879820885 0.0 2 1.0010921915810148E-4 0.0 0.0 0.1750910243075195 0.0 3 1.0010921915810148E-4 0.0 0.0 0.27339827752077517 0.0 4 1.0010921915810148E-4 0.0 0.0 0.3723061860489794 0.0 5 1.0010921915810148E-4 0.0 0.0 0.7296960984434018 0.0 6 1.0010921915810148E-4 0.0 0.0 1.1082090560801834 0.0 7 1.0010921915810148E-4 0.0 0.0 1.390717272544346 0.0 8 1.0010921915810148E-4 0.0 0.0 1.8294959801143047 0.0 9 1.0010921915810148E-4 0.0 0.0 2.07336203798344 0.0 10 1.0010921915810148E-4 0.0 0.0 2.4998273115969525 0.0 11 1.0010921915810148E-4 0.0 0.0 2.996969693936084 0.0 12 1.0010921915810148E-4 0.0 0.0 3.339743660333424 0.0 13 1.0010921915810148E-4 0.0 0.0 3.512331954161991 0.0 14 1.0010921915810148E-4 0.0 0.0 3.625955917906436 0.0 15 1.0010921915810148E-4 0.0 0.0 3.752894407798909 0.0 16 1.0010921915810148E-4 0.0 0.0 3.9886516189162378 0.0 17 1.0010921915810148E-4 0.0 0.0 4.265753937545862 0.0 18 1.0010921915810148E-4 0.0 0.0 4.567883560965013 0.0 19 1.0010921915810148E-4 0.0 0.0 4.764397958172366 0.0 20 1.0010921915810148E-4 0.0 0.0 4.971624041829636 0.0 21 1.0010921915810148E-4 0.0 0.0 5.222097308163206 0.0 22 1.0010921915810148E-4 0.0 0.0 5.4944944934924 0.0 23 1.0010921915810148E-4 0.0 0.0 5.770195283053812 0.0 24 1.0010921915810148E-4 0.0 0.0 5.989834909886686 0.0 25 1.0010921915810148E-4 0.0 0.0 6.2115768303218815 0.0 26 1.0010921915810148E-4 0.0 0.0 6.41099439488482 0.0 27 1.0010921915810148E-4 0.0 0.0 6.652057394617528 0.0 28 1.0010921915810148E-4 0.0 1.0010921915810148E-4 6.867692652684078 0.0 29 1.0010921915810148E-4 0.0 1.0010921915810148E-4 7.103549973020566 0.0 30 1.0010921915810148E-4 0.0 1.0010921915810148E-4 7.45763628118277 0.0 31 1.0010921915810148E-4 0.0 1.0010921915810148E-4 7.719622107719522 0.0 32 1.0010921915810148E-4 0.0 1.0010921915810148E-4 7.991919183829558 0.0 33 1.0010921915810148E-4 0.0 1.0010921915810148E-4 8.257909379132634 0.0 34 1.0010921915810148E-4 0.0 1.0010921915810148E-4 8.510184611411049 0.0 35 1.0010921915810148E-4 0.0 1.0010921915810148E-4 8.782481687521086 0.0 36 1.0010921915810148E-4 0.0 1.0010921915810148E-4 9.010930925639872 0.0 37 1.0010921915810148E-4 0.0 1.0010921915810148E-4 9.257600041645436 0.0 38 1.0010921915810148E-4 0.0 1.0010921915810148E-4 9.561831958666906 0.0 39 1.0010921915810148E-4 0.0 1.0010921915810148E-4 10.011522571125097 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGTC 20 7.0328417E-4 45.000004 21 TATAGCG 35 1.2117198E-7 45.000004 1 ATACGCG 20 7.0328417E-4 45.000004 1 CGTTATT 455 0.0 43.021976 1 TACGAAT 65 0.0 41.53846 12 CGTTTTT 2100 0.0 39.964287 1 TACGGGA 285 0.0 39.473682 4 ACGGGAC 225 0.0 39.0 5 ATAACGG 110 0.0 38.863636 2 ACGACCA 755 0.0 38.74172 28 CACGGGA 325 0.0 38.076923 4 CACGACC 775 0.0 38.032257 27 AGACACG 765 0.0 37.941174 24 AGCGACT 335 0.0 37.61194 19 CTAGACG 30 1.1398149E-4 37.499996 1 AACACGT 735 0.0 37.34694 41 TACGGGT 145 0.0 37.24138 4 ACACGAC 780 0.0 37.211536 26 ACGGGAT 365 0.0 36.9863 5 CGGTTTT 540 0.0 36.666668 1 >>END_MODULE