SRR2936227.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936227.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	640969
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1069	0.16677873656916326	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCATAC	25	3.888867E-5	45.000004	24
TACGGGT	80	0.0	45.0	4
TGACGAA	20	7.03095E-4	45.0	22
GCGCAAA	20	7.03095E-4	45.0	1
CGCACTC	20	7.03095E-4	45.0	21
CAGTACG	20	7.03095E-4	45.0	1
TCAACGG	60	3.6379788E-12	41.250004	2
CACGACC	100	0.0	40.500004	27
TACGCGG	50	1.0804797E-9	40.500004	2
TGTTACG	45	1.925946E-8	40.0	1
CATAGCG	40	3.4550249E-7	39.375	1
ATGTGCG	35	6.243963E-6	38.57143	1
CGAGATA	245	0.0	38.57143	19
AACACGG	35	6.243963E-6	38.57143	2
AACACGT	105	0.0	38.571426	41
TACCGGG	65	9.094947E-12	38.07692	3
TATGGGA	485	0.0	38.041237	4
TTACACG	225	0.0	38.0	34
GCCGCAT	30	1.1393583E-4	37.500004	19
ACGGGTA	90	0.0	37.5	5