##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936227.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 640969 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98983570188262 33.0 31.0 34.0 30.0 34.0 2 32.12429618281071 33.0 31.0 34.0 30.0 34.0 3 32.046958589260946 33.0 31.0 34.0 30.0 34.0 4 35.779087600180354 37.0 35.0 37.0 35.0 37.0 5 31.28947577807975 37.0 35.0 37.0 0.0 37.0 6 33.47720716602519 37.0 35.0 37.0 17.0 37.0 7 29.436220784468517 35.0 32.0 37.0 0.0 37.0 8 32.554189048144295 35.0 33.0 37.0 17.0 37.0 9 36.47051573477032 39.0 35.0 39.0 32.0 39.0 10 36.80280793610923 38.0 35.0 39.0 33.0 39.0 11 36.913782101786516 39.0 37.0 39.0 33.0 39.0 12 36.90718739907858 39.0 35.0 39.0 33.0 39.0 13 36.76996703428715 39.0 35.0 39.0 33.0 39.0 14 38.04091149493969 40.0 37.0 41.0 33.0 41.0 15 38.139059767321044 40.0 37.0 41.0 33.0 41.0 16 38.19104824102258 40.0 37.0 41.0 33.0 41.0 17 38.15091681500977 40.0 37.0 41.0 33.0 41.0 18 38.076279820084906 40.0 37.0 41.0 33.0 41.0 19 38.01897439657768 40.0 37.0 41.0 33.0 41.0 20 37.93214024391195 40.0 36.0 41.0 33.0 41.0 21 37.86631178730953 40.0 36.0 41.0 33.0 41.0 22 37.82175425020555 40.0 36.0 41.0 33.0 41.0 23 37.775970444748495 40.0 36.0 41.0 33.0 41.0 24 37.72316913922514 40.0 36.0 41.0 33.0 41.0 25 37.586518224750336 39.0 36.0 41.0 33.0 41.0 26 37.418847089328814 39.0 36.0 41.0 32.0 41.0 27 37.389527418642714 39.0 36.0 41.0 32.0 41.0 28 37.23533119386429 39.0 35.0 41.0 32.0 41.0 29 37.2008771095014 39.0 35.0 41.0 32.0 41.0 30 37.1063623981815 39.0 35.0 41.0 32.0 41.0 31 37.012133192088854 39.0 35.0 41.0 31.0 41.0 32 36.94655747781874 39.0 35.0 41.0 31.0 41.0 33 36.81464470200587 39.0 35.0 41.0 31.0 41.0 34 36.69820225315109 39.0 35.0 41.0 30.0 41.0 35 36.61168792874538 39.0 35.0 41.0 30.0 41.0 36 36.48969918982041 39.0 35.0 41.0 30.0 41.0 37 36.427633785721305 39.0 35.0 40.0 30.0 41.0 38 36.31585458891148 39.0 35.0 40.0 30.0 41.0 39 36.2923838750392 39.0 35.0 40.0 30.0 41.0 40 36.15055018261413 39.0 35.0 40.0 29.0 41.0 41 36.02222884414067 39.0 35.0 40.0 29.0 41.0 42 36.001446247790454 38.0 35.0 40.0 29.0 41.0 43 35.86151436340915 38.0 35.0 40.0 29.0 41.0 44 35.74326059450613 38.0 35.0 40.0 28.0 41.0 45 35.62374623421726 38.0 34.0 40.0 28.0 41.0 46 35.52728447085585 38.0 34.0 40.0 27.0 41.0 47 35.40503050849573 38.0 34.0 40.0 27.0 41.0 48 35.29283163460323 38.0 34.0 40.0 27.0 41.0 49 35.13017790251946 38.0 34.0 40.0 26.0 41.0 50 34.95613360396525 38.0 34.0 40.0 26.0 41.0 51 32.95079793250532 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 11.0 9 28.0 10 25.0 11 24.0 12 12.0 13 14.0 14 11.0 15 33.0 16 66.0 17 139.0 18 241.0 19 514.0 20 950.0 21 1459.0 22 2132.0 23 2932.0 24 3775.0 25 4851.0 26 5931.0 27 7121.0 28 8454.0 29 10170.0 30 12714.0 31 16685.0 32 21884.0 33 31948.0 34 47025.0 35 55571.0 36 64653.0 37 100599.0 38 124026.0 39 116958.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.31389193549142 19.92920094419543 23.497392229577404 11.259514890735746 2 33.27508818679218 23.836254171418584 24.770308704477127 18.1183489373121 3 33.51862570576736 24.07433120790553 25.932767419329174 16.474275666997936 4 28.862394281158682 26.495977184544028 25.86178114698215 18.779847387315144 5 22.458808460315556 40.15155179111626 20.34341754437422 17.04622220419396 6 27.227369810396446 36.885715221797 22.797514388371358 13.089400579435198 7 72.53782944260955 19.33057604969975 5.130045290801895 3.0015492168888045 8 86.81933135611862 4.582124876554093 5.8478647173264235 2.750679050000858 9 80.52089882662032 7.091138573004311 7.788988235000445 4.598974365374924 10 43.5869753451415 28.39622509044899 14.987932333701007 13.028867230708505 11 31.55300802378898 27.55702693890032 23.337946140921012 17.552018896389683 12 30.195688090999724 24.015514010817995 27.163560172176815 18.62523772600547 13 25.50965803338383 24.982175425020557 27.964534946307857 21.54363159528776 14 20.905847240662183 27.344848190786138 28.808881552774 22.940423015777675 15 20.6061447589509 27.889648329326377 31.578594284590988 19.925612627131734 16 24.273560811833335 26.246511141724483 29.750892788886823 19.729035257555356 17 23.898035630428303 26.238398424884824 27.402417277590647 22.461148667096225 18 24.876086050963465 26.665564169249993 27.542049615504027 20.916300164282518 19 25.29373495442057 27.931460023807702 26.452137310852784 20.32266771091894 20 26.976811671079254 26.28239431236144 27.659059954537586 19.08173406202172 21 27.41443033906476 26.085660928999687 27.05325842591451 19.44665030602104 22 25.92574679898716 24.88139051966632 26.632177219179088 22.560685462167438 23 24.410072874039148 26.36430154968493 27.764993314809296 21.46063226146662 24 23.72345620459024 25.24271844660194 29.295020508012087 21.738804840795733 25 23.28287327468255 27.02923230296629 27.565607697096116 22.122286725255044 26 22.778324692769853 27.76436925966778 27.65952799589372 21.797778051668644 27 22.739321246425334 28.229134326309076 27.465134819312638 21.56640960795296 28 21.22411536283346 27.87591911621311 28.687190800179103 22.212774720774327 29 22.449447633192868 26.39160396212609 28.708408674990523 22.450539729690515 30 24.10100956520518 26.365237632397196 28.011339081921278 21.52241372047634 31 24.328633678071796 26.59239370390768 26.826570395760168 22.252402222260358 32 24.770932759618642 26.89708862675106 27.547822125563016 20.784156488067286 33 24.560314149358238 26.463526317185387 26.375534542232153 22.600624991224226 34 22.437122544148 26.71127620836577 28.350513051333216 22.501088196153013 35 23.45324032831541 25.296855230128134 28.532425125084053 22.717479316472403 36 23.608006003410463 28.257372821462507 26.908945674439792 21.22567550068724 37 23.380537904329227 27.165120310030595 28.364866319588 21.08947546605218 38 23.114534400259608 26.712524318648796 27.5635795178862 22.609361763205396 39 23.588348266452826 26.208599791877614 27.75095207412527 22.452099867544295 40 24.37933815831967 25.093881295351256 28.753652672750164 21.77312787357891 41 21.42849342167874 25.160655195493074 29.940761565691943 23.47008981713624 42 22.09654445066766 25.60919482845504 27.626765100964324 24.667495619912973 43 22.551012607473996 25.22898923348867 28.772374326995532 23.4476238320418 44 22.28953350318034 25.019462719725915 28.228666284952936 24.462337492140808 45 22.75757485931457 25.476115069527545 28.157367985035158 23.60894208612273 46 22.876145336201905 26.189566110061484 27.48338843220187 23.45090012153474 47 22.004808344865353 24.994968555421558 29.87929213425298 23.120930965460108 48 22.12415889067958 24.480279077459286 30.394293639786014 23.001268392075126 49 22.30513488171815 25.227585109420268 29.139630777775526 23.32764923108606 50 20.74172073844445 24.99247233485551 30.591183036933145 23.6746238897669 51 20.90116682710084 25.456925373926044 28.814498049047614 24.827409749925504 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 200.0 1 733.5 2 1267.0 3 1971.5 4 2676.0 5 1994.0 6 1312.0 7 1138.5 8 965.0 9 904.5 10 844.0 11 923.0 12 1002.0 13 1060.5 14 1119.0 15 1108.5 16 1098.0 17 1172.0 18 1246.0 19 1391.0 20 1536.0 21 1981.0 22 2426.0 23 2512.5 24 2599.0 25 3434.0 26 5189.5 27 6110.0 28 7699.5 29 9289.0 30 10934.5 31 12580.0 32 14521.0 33 16462.0 34 18846.0 35 21230.0 36 21778.0 37 22326.0 38 24333.5 39 26341.0 40 29241.5 41 32142.0 42 35268.5 43 38395.0 44 41224.5 45 44054.0 46 46752.0 47 49450.0 48 49057.5 49 48665.0 50 47935.0 51 47205.0 52 43686.0 53 40167.0 54 37721.0 55 35275.0 56 34353.5 57 33432.0 58 32491.0 59 31550.0 60 30778.5 61 30007.0 62 26796.5 63 23586.0 64 20124.5 65 16663.0 66 14163.0 67 11663.0 68 9885.0 69 8107.0 70 6638.5 71 5170.0 72 4330.5 73 3491.0 74 2783.5 75 1749.0 76 1422.0 77 1055.0 78 688.0 79 560.5 80 433.0 81 338.0 82 243.0 83 167.5 84 92.0 85 64.5 86 37.0 87 33.0 88 29.0 89 22.5 90 16.0 91 12.5 92 9.0 93 6.0 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 640969.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.81562615935062 #Duplication Level Percentage of deduplicated Percentage of total 1 71.28417475828668 23.39234829945754 2 8.427870106485743 5.531316694680053 3 4.073028871988855 4.009769783982836 4 2.673829127859778 3.5097350829531595 5 2.0480310272854547 3.3603710277075156 6 1.5294966337237668 3.011483384655862 7 1.1460532636634835 2.6325918821359195 8 0.9305948827198041 2.4430443021710264 9 0.7399878172044372 2.185484721466923 >10 7.043214969093402 46.567320155306554 >50 0.07743043204537473 1.6155283670787883 >100 0.024854212753603874 1.3993926301224804 >500 9.559312597539949E-4 0.1739437824261187 >1k 4.7796562987699747E-4 0.16766988585529385 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1069 0.16677873656916326 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06490173471727961 0.0 2 0.0 0.0 0.0 0.2859732685980133 0.0 3 0.0 0.0 0.0 0.408444090119803 0.0 4 0.0 0.0 0.0 0.5497925796723399 0.0 5 0.0 0.0 0.0 0.9994243091319549 0.0 6 0.0 0.0 0.0 1.3311096168457446 0.0 7 0.0 0.0 0.0 1.5919646659978877 0.0 8 0.0 0.0 0.0 1.9983805769077756 0.0 9 0.0 0.0 0.0 2.155174431212742 0.0 10 0.0 0.0 0.0 2.631640531757386 0.0 11 0.0 0.0 0.0 3.261624197114057 0.0 12 0.0 0.0 0.0 3.71952465719871 0.0 13 0.0 0.0 0.0 3.9387240256549068 0.0 14 0.0 0.0 0.0 4.045281441068132 0.0 15 0.0 0.0 0.0 4.2289096664581285 0.0 16 0.0 0.0 0.0 4.6105193854929025 0.0 17 0.0 0.0 0.0 5.054534618678907 0.0 18 0.0 0.0 0.0 5.501670127572472 0.0 19 0.0 0.0 0.0 5.792323809731828 0.0 20 0.0 0.0 0.0 6.08328951946194 0.0 21 0.0 0.0 0.0 6.461154907647639 0.0 22 0.0 0.0 0.0 6.861798308498539 0.0 23 0.0 0.0 0.0 7.239195655328105 0.0 24 0.0 0.0 0.0 7.548102950376696 0.0 25 0.0 0.0 0.0 7.833452163833196 0.0 26 0.0 0.0 0.0 8.094619240556096 0.0 27 0.0 0.0 0.0 8.359842675698825 0.0 28 0.0 0.0 0.0 8.626314221124579 0.0 29 0.0 0.0 0.0 8.901834566102261 0.0 30 0.0 0.0 0.0 9.217450453922108 0.0 31 0.0 0.0 0.0 9.517464963204148 0.0 32 0.0 0.0 0.0 9.812331017568713 0.0 33 0.0 0.0 0.0 10.09955239644975 0.0 34 0.0 0.0 0.0 10.411267939635145 0.0 35 0.0 0.0 0.0 10.71580684869315 0.0 36 0.0 0.0 0.0 11.034855039791315 0.0 37 0.0 0.0 0.0 11.332685356078063 0.0 38 1.56013785378076E-4 0.0 0.0 11.640968595985141 0.0 39 1.56013785378076E-4 0.0 0.0 11.96142091115171 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATAC 25 3.888867E-5 45.000004 24 TACGGGT 80 0.0 45.0 4 TGACGAA 20 7.03095E-4 45.0 22 GCGCAAA 20 7.03095E-4 45.0 1 CGCACTC 20 7.03095E-4 45.0 21 CAGTACG 20 7.03095E-4 45.0 1 TCAACGG 60 3.6379788E-12 41.250004 2 CACGACC 100 0.0 40.500004 27 TACGCGG 50 1.0804797E-9 40.500004 2 TGTTACG 45 1.925946E-8 40.0 1 CATAGCG 40 3.4550249E-7 39.375 1 ATGTGCG 35 6.243963E-6 38.57143 1 CGAGATA 245 0.0 38.57143 19 AACACGG 35 6.243963E-6 38.57143 2 AACACGT 105 0.0 38.571426 41 TACCGGG 65 9.094947E-12 38.07692 3 TATGGGA 485 0.0 38.041237 4 TTACACG 225 0.0 38.0 34 GCCGCAT 30 1.1393583E-4 37.500004 19 ACGGGTA 90 0.0 37.5 5 >>END_MODULE