SRR2936225.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936225.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	826453
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17754	2.1482165349995705	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4904	0.5933791758273005	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC	3836	0.464152226442399	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3552	0.42978850581944766	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2577	0.3118144649484	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG	1921	0.2324391102700335	No Hit
GAACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT	1336	0.16165468574740488	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC	1108	0.13406691003602142	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTT	834	0.10091317957585004	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGATAT	35	1.2113742E-7	45.0	9
CGTTATT	1400	0.0	43.553574	1
CGGTTTA	155	0.0	43.548386	1
CGTTTTT	6935	0.0	43.18313	1
CGGTTTT	1605	0.0	42.897198	1
CGTTTTA	1060	0.0	42.240566	1
ACGGGTC	95	0.0	40.263157	5
ACGACCA	285	0.0	38.68421	28
GCGAATG	35	6.2461604E-6	38.571426	1
CGGTATT	35	6.2461604E-6	38.571426	1
GCGTATG	35	6.2461604E-6	38.571426	1
ACGGGTA	60	1.546141E-10	37.499996	5
GTTAACG	30	1.13964445E-4	37.499996	1
CGGGATT	120	0.0	37.499996	6
TAAGGCG	30	1.13964445E-4	37.499996	5
GTTATTT	1655	0.0	37.386703	2
TCAAGCG	295	0.0	37.372883	17
TACGGCT	205	0.0	37.317074	7
TGGGCGA	285	0.0	37.105263	6
TTAACGG	85	0.0	37.058823	2