##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936221.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 478000 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.025832635983264 33.0 31.0 34.0 30.0 34.0 2 32.16769037656904 33.0 31.0 34.0 30.0 34.0 3 32.07177615062761 33.0 31.0 34.0 30.0 34.0 4 35.80048953974895 37.0 35.0 37.0 35.0 37.0 5 31.280771966527197 37.0 35.0 37.0 0.0 37.0 6 33.49182426778243 37.0 35.0 37.0 17.0 37.0 7 29.486667364016736 35.0 32.0 37.0 0.0 37.0 8 32.58208577405858 35.0 33.0 37.0 17.0 37.0 9 36.523119246861924 39.0 35.0 39.0 32.0 39.0 10 36.88387656903766 38.0 37.0 39.0 34.0 39.0 11 36.955127615062764 39.0 37.0 39.0 33.0 39.0 12 36.95211506276151 39.0 37.0 39.0 33.0 39.0 13 36.794115062761506 39.0 37.0 39.0 33.0 39.0 14 38.09426150627615 40.0 37.0 41.0 33.0 41.0 15 38.212861924686194 40.0 37.0 41.0 33.0 41.0 16 38.25674686192469 40.0 37.0 41.0 34.0 41.0 17 38.207495815899584 40.0 37.0 41.0 34.0 41.0 18 38.1344769874477 40.0 37.0 41.0 33.0 41.0 19 38.052667364016735 40.0 37.0 41.0 34.0 41.0 20 37.971223849372386 40.0 36.0 41.0 33.0 41.0 21 37.89395188284519 40.0 36.0 41.0 33.0 41.0 22 37.83823640167364 40.0 36.0 41.0 33.0 41.0 23 37.77492259414226 40.0 36.0 41.0 33.0 41.0 24 37.72218828451883 40.0 36.0 41.0 33.0 41.0 25 37.583123430962345 40.0 36.0 41.0 33.0 41.0 26 37.4198179916318 39.0 35.0 41.0 33.0 41.0 27 37.37460669456067 39.0 35.0 41.0 32.0 41.0 28 37.270280334728035 39.0 35.0 41.0 32.0 41.0 29 37.26976150627615 39.0 35.0 41.0 32.0 41.0 30 37.151910041841006 39.0 35.0 41.0 32.0 41.0 31 37.04029079497908 39.0 35.0 41.0 31.0 41.0 32 36.95460669456067 39.0 35.0 41.0 31.0 41.0 33 36.816640167364014 39.0 35.0 41.0 31.0 41.0 34 36.680539748953976 39.0 35.0 41.0 31.0 41.0 35 36.571012552301255 39.0 35.0 41.0 30.0 41.0 36 36.42797280334728 39.0 35.0 41.0 30.0 41.0 37 36.33146652719665 39.0 35.0 41.0 30.0 41.0 38 36.213617154811715 39.0 35.0 40.0 30.0 41.0 39 36.19038912133891 39.0 35.0 40.0 30.0 41.0 40 36.02204184100418 39.0 35.0 40.0 29.0 41.0 41 35.916822175732214 38.0 35.0 40.0 29.0 41.0 42 35.832322175732216 38.0 35.0 40.0 28.0 41.0 43 35.701953974895396 38.0 35.0 40.0 28.0 41.0 44 35.55794979079498 38.0 34.0 40.0 27.0 41.0 45 35.4204309623431 38.0 34.0 40.0 27.0 41.0 46 35.30356903765691 38.0 34.0 40.0 26.0 41.0 47 35.16060251046025 38.0 34.0 40.0 26.0 41.0 48 35.06048117154812 38.0 34.0 40.0 26.0 41.0 49 34.89439748953975 37.0 34.0 40.0 26.0 41.0 50 34.75215690376569 37.0 34.0 40.0 25.0 41.0 51 32.7949769874477 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 18.0 10 21.0 11 11.0 12 21.0 13 12.0 14 21.0 15 34.0 16 67.0 17 120.0 18 227.0 19 373.0 20 624.0 21 1000.0 22 1392.0 23 2083.0 24 2809.0 25 3755.0 26 4806.0 27 5687.0 28 6666.0 29 7962.0 30 9790.0 31 12648.0 32 16312.0 33 23808.0 34 35226.0 35 41660.0 36 47611.0 37 74565.0 38 91464.0 39 87176.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.75774058577406 20.330543933054393 24.878451882845187 12.03326359832636 2 32.483682008368206 23.960041841004184 25.903765690376567 17.652510460251044 3 33.07866108786611 23.74686192468619 26.624686192468623 16.54979079497908 4 28.8826359832636 26.51317991631799 25.921966527196656 18.682217573221756 5 22.534518828451883 40.11171548117155 20.655857740585773 16.697907949790793 6 27.481380753138072 36.40481171548117 22.656066945606696 13.457740585774058 7 72.41046025104603 19.09958158995816 5.363389121338912 3.1265690376569037 8 87.61108786610879 4.140167364016737 5.7215481171548115 2.5271966527196654 9 81.50794979079498 6.869246861924687 7.52887029288703 4.093933054393306 10 45.04748953974895 27.956694560669455 13.923221757322176 13.072594142259414 11 32.09476987447699 27.277405857740582 23.385146443514646 17.242677824267783 12 31.366527196652722 23.233682008368202 26.198535564853557 19.201255230125522 13 24.692677824267783 25.482217573221753 28.17531380753138 21.64979079497908 14 21.463179916317994 26.779079497907947 28.4418410041841 23.315899581589957 15 21.118619246861925 27.703556485355644 29.995397489539748 21.18242677824268 16 24.56945606694561 25.44748953974895 29.732426778242676 20.25062761506276 17 24.622594142259413 26.077615062761506 26.780753138075315 22.519037656903766 18 24.211924686192468 26.75523012552301 27.344351464435146 21.688493723849373 19 25.237656903765693 27.827196652719664 25.667573221757323 21.26757322175732 20 27.049790794979078 26.420083682008368 27.26192468619247 19.268200836820085 21 27.122803347280332 26.933682008368198 26.124058577405858 19.819456066945605 22 25.75502092050209 24.939121338912134 26.452719665271967 22.853138075313808 23 24.872175732217574 26.489539748953977 27.295397489539745 21.342887029288704 24 23.677824267782427 25.360669456066947 29.24330543933054 21.718200836820085 25 23.676778242677823 26.846652719665272 27.182217573221756 22.294351464435145 26 23.32133891213389 27.428661087866107 27.126987447698745 22.123012552301255 27 22.964225941422594 27.70376569037657 27.443933054393305 21.88807531380753 28 21.27866108786611 28.732426778242676 28.469456066945607 21.519456066945605 29 22.68723849372385 26.123012552301255 27.702092050209203 23.487656903765693 30 23.32175732217573 27.640794979079498 27.310460251046027 21.726987447698747 31 24.665899581589958 26.552510460251042 26.184100418410043 22.597489539748956 32 24.677405857740588 27.45355648535565 26.529707112970712 21.339330543933055 33 24.592677824267785 27.168200836820084 26.359414225941425 21.87970711297071 34 22.60836820083682 26.676987447698746 27.123012552301258 23.591631799163178 35 23.92824267782427 25.694769874476986 26.72468619246862 23.652301255230128 36 23.273221757322176 28.31297071129707 26.165062761506274 22.248744769874477 37 23.210460251046026 28.641422594142256 27.252092050209203 20.89602510460251 38 23.538702928870293 27.568410041841002 27.14958158995816 21.743305439330545 39 23.385146443514646 27.829079497907948 27.092468619246862 21.693305439330544 40 24.28661087866109 26.740794979079496 27.481171548117157 21.49142259414226 41 21.57029288702929 26.35 28.76987447698745 23.309832635983263 42 22.08347280334728 26.06778242677824 27.50062761506276 24.348117154811717 43 22.401882845188283 26.648535564853553 27.61129707112971 23.338284518828452 44 22.140794979079498 27.057322175732217 27.047280334728036 23.754602510460252 45 22.556066945606695 27.120711297071132 26.731171548117157 23.59205020920502 46 22.469665271966527 27.841422594142262 26.226987447698747 23.461924686192468 47 22.420920502092052 25.947071129707112 29.064016736401673 22.567991631799163 48 22.852719665271966 25.28347280334728 29.322175732217577 22.54163179916318 49 22.23389121338912 26.697071129707112 27.979288702928873 23.089748953974894 50 21.55502092050209 26.270083682008366 29.25041841004184 22.924476987447697 51 21.818619246861925 26.207322175732216 27.768619246861924 24.205439330543932 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 222.0 1 604.0 2 986.0 3 2058.5 4 3131.0 5 2293.0 6 1455.0 7 1191.0 8 927.0 9 903.5 10 880.0 11 928.0 12 976.0 13 967.5 14 959.0 15 972.0 16 985.0 17 1001.5 18 1018.0 19 1097.5 20 1177.0 21 1427.5 22 1678.0 23 1911.0 24 2144.0 25 2674.5 26 3829.5 27 4454.0 28 5943.0 29 7432.0 30 8826.5 31 10221.0 32 11285.5 33 12350.0 34 13437.5 35 14525.0 36 15594.0 37 16663.0 38 18103.5 39 19544.0 40 21619.0 41 23694.0 42 25202.0 43 26710.0 44 28805.0 45 30900.0 46 32194.5 47 33489.0 48 33884.5 49 34280.0 50 33058.0 51 31836.0 52 30302.5 53 28769.0 54 27248.5 55 25728.0 56 25636.0 57 25544.0 58 25615.0 59 25686.0 60 24819.5 61 23953.0 62 21455.5 63 18958.0 64 16052.5 65 13147.0 66 11475.0 67 9803.0 68 8585.5 69 7368.0 70 6336.0 71 5304.0 72 4277.5 73 3251.0 74 2583.5 75 1544.5 76 1173.0 77 939.5 78 706.0 79 544.0 80 382.0 81 312.5 82 243.0 83 172.0 84 101.0 85 87.0 86 73.0 87 49.0 88 25.0 89 20.0 90 15.0 91 9.5 92 4.0 93 5.0 94 6.0 95 3.5 96 1.0 97 1.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 478000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.05887561779287 #Duplication Level Percentage of deduplicated Percentage of total 1 67.3008311206353 23.594914672324364 2 9.408059097465186 6.596719474057531 3 5.299951650519392 5.574310370876262 4 3.4322642346240064 4.813252995563284 5 2.4518840804940147 4.298014950364305 6 1.713454818921211 3.6043079623959926 7 1.3481835778284093 3.3086060255526024 8 1.0528599069338782 2.9529667616124655 9 0.9078298358098766 2.8644743966201807 >10 7.0338724664336345 40.24437753179447 >50 0.034072058695335354 0.8154225810478652 >100 0.015541640808398545 0.9243970714474754 >500 5.977554157076364E-4 0.1089744903996117 >1k 5.977554157076364E-4 0.299260715943549 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1428 0.29874476987447696 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 520 0.10878661087866108 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.276150627615063E-4 0.0 0.0 0.04184100418410042 0.0 2 6.276150627615063E-4 0.0 0.0 0.14246861924686194 0.0 3 6.276150627615063E-4 0.0 0.0 0.20794979079497908 0.0 4 6.276150627615063E-4 0.0 0.0 0.29497907949790797 0.0 5 6.276150627615063E-4 0.0 0.0 0.5527196652719665 0.0 6 6.276150627615063E-4 0.0 0.0 0.7767782426778242 0.0 7 6.276150627615063E-4 0.0 0.0 0.9447698744769875 0.0 8 6.276150627615063E-4 0.0 0.0 1.2577405857740587 0.0 9 6.276150627615063E-4 0.0 0.0 1.395397489539749 0.0 10 6.276150627615063E-4 0.0 0.0 1.7125523012552302 0.0 11 6.276150627615063E-4 0.0 0.0 2.152928870292887 0.0 12 6.276150627615063E-4 0.0 0.0 2.443305439330544 0.0 13 6.276150627615063E-4 0.0 0.0 2.5838912133891214 0.0 14 6.276150627615063E-4 0.0 0.0 2.6391213389121337 0.0 15 6.276150627615063E-4 0.0 0.0 2.757531380753138 0.0 16 6.276150627615063E-4 0.0 0.0 3.0002092050209206 0.0 17 6.276150627615063E-4 0.0 0.0 3.2765690376569037 0.0 18 6.276150627615063E-4 0.0 0.0 3.565062761506276 0.0 19 6.276150627615063E-4 0.0 0.0 3.7640167364016737 0.0 20 6.276150627615063E-4 0.0 0.0 3.9575313807531383 0.0 21 6.276150627615063E-4 0.0 0.0 4.215062761506276 0.0 22 6.276150627615063E-4 0.0 0.0 4.475523012552301 0.0 23 6.276150627615063E-4 0.0 0.0 4.750418410041841 0.0 24 6.276150627615063E-4 0.0 0.0 4.966108786610879 0.0 25 6.276150627615063E-4 0.0 0.0 5.169874476987448 0.0 26 6.276150627615063E-4 0.0 0.0 5.3581589958158995 0.0 27 6.276150627615063E-4 0.0 0.0 5.535983263598326 0.0 28 6.276150627615063E-4 0.0 0.0 5.7320083682008365 0.0 29 6.276150627615063E-4 0.0 0.0 5.940585774058578 0.0 30 6.276150627615063E-4 0.0 0.0 6.177196652719665 0.0 31 6.276150627615063E-4 0.0 0.0 6.398744769874477 0.0 32 6.276150627615063E-4 0.0 0.0 6.6292887029288705 0.0 33 6.276150627615063E-4 0.0 0.0 6.856694560669456 0.0 34 6.276150627615063E-4 0.0 0.0 7.0849372384937235 0.0 35 6.276150627615063E-4 0.0 0.0 7.336192468619247 0.0 36 6.276150627615063E-4 0.0 0.0 7.557322175732217 0.0 37 6.276150627615063E-4 0.0 0.0 7.7889121338912135 0.0 38 6.276150627615063E-4 0.0 0.0 8.025523012552302 0.0 39 6.276150627615063E-4 0.0 0.0 8.266527196652719 2.0920502092050208E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATAG 30 2.1628312E-6 45.000004 11 CTTCGCA 25 3.8873746E-5 45.0 24 TCGTTCA 25 3.8873746E-5 45.0 16 ATCCGAC 25 3.8873746E-5 45.0 38 GTATGCG 20 7.0291467E-4 45.0 1 CGAATAT 55 1.8189894E-12 45.0 14 GCGATAT 40 6.8012014E-9 45.0 9 GTATACG 20 7.0291467E-4 45.0 1 TATACGG 35 1.2099372E-7 45.0 2 TTCGCAT 25 3.8873746E-5 45.0 25 TAATCGA 20 7.0291467E-4 45.0 13 ATGGGTA 75 0.0 42.000004 5 GCTACGA 60 3.6379788E-12 41.250004 10 CGGGTAT 120 0.0 39.375004 6 ATAACGG 40 3.4525692E-7 39.375 2 ACCCACC 270 0.0 39.166664 13 ATAGCGG 70 0.0 38.571426 2 ACGGGTA 70 0.0 38.571426 5 ATATCAC 280 0.0 38.571426 30 TTAACGG 35 6.240636E-6 38.571426 2 >>END_MODULE