##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936220.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 632299 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90278649815989 31.0 31.0 34.0 30.0 34.0 2 32.04754396258732 33.0 31.0 34.0 30.0 34.0 3 31.78007240245517 33.0 31.0 34.0 30.0 34.0 4 35.61371123471649 37.0 35.0 37.0 33.0 37.0 5 31.274370195113388 37.0 35.0 37.0 0.0 37.0 6 33.444947722517355 37.0 35.0 37.0 17.0 37.0 7 29.385864915174626 35.0 32.0 37.0 0.0 37.0 8 32.51542229230159 35.0 33.0 37.0 17.0 37.0 9 36.46109989103257 39.0 35.0 39.0 32.0 39.0 10 36.82852732647055 38.0 37.0 39.0 33.0 39.0 11 36.90587997134267 39.0 37.0 39.0 33.0 39.0 12 36.896900042543166 39.0 37.0 39.0 33.0 39.0 13 36.756877679705326 39.0 35.0 39.0 33.0 39.0 14 37.97593385407853 40.0 37.0 41.0 33.0 41.0 15 38.09721192030985 40.0 37.0 41.0 33.0 41.0 16 38.15491563326844 40.0 37.0 41.0 33.0 41.0 17 38.14037820714567 40.0 37.0 41.0 33.0 41.0 18 38.03662665922293 40.0 37.0 41.0 33.0 41.0 19 37.905154048954685 40.0 37.0 41.0 33.0 41.0 20 37.78519972354851 40.0 36.0 41.0 33.0 41.0 21 37.66970373193695 40.0 36.0 41.0 33.0 41.0 22 37.625802033531606 39.0 35.0 41.0 33.0 41.0 23 37.55490519516874 39.0 35.0 41.0 33.0 41.0 24 37.47955951219281 39.0 35.0 41.0 33.0 41.0 25 37.325233789710246 39.0 35.0 41.0 32.0 41.0 26 37.1730431330747 39.0 35.0 41.0 32.0 41.0 27 37.139565300593546 39.0 35.0 41.0 32.0 41.0 28 37.00708209249105 39.0 35.0 41.0 32.0 41.0 29 36.93684475224538 39.0 35.0 41.0 31.0 41.0 30 36.75610747447015 39.0 35.0 41.0 31.0 41.0 31 36.61202690499273 39.0 35.0 41.0 31.0 41.0 32 36.444106348420604 39.0 35.0 40.0 30.0 41.0 33 36.213585661214076 39.0 35.0 40.0 30.0 41.0 34 36.015684035559126 39.0 35.0 40.0 29.0 41.0 35 35.82893694280712 39.0 35.0 40.0 28.0 41.0 36 35.64054980317856 38.0 35.0 40.0 27.0 41.0 37 35.5214305257481 38.0 35.0 40.0 26.0 41.0 38 35.33708577745655 38.0 34.0 40.0 25.0 41.0 39 35.270272450217384 38.0 34.0 40.0 25.0 41.0 40 35.108921570333024 38.0 34.0 40.0 24.0 41.0 41 34.989512872865525 38.0 34.0 40.0 24.0 41.0 42 34.93657272904117 38.0 34.0 40.0 24.0 41.0 43 34.82190862234481 38.0 34.0 40.0 23.0 41.0 44 34.64341079141356 38.0 34.0 40.0 23.0 41.0 45 34.50298671989043 38.0 33.0 40.0 23.0 41.0 46 34.40310201344617 37.0 33.0 40.0 23.0 41.0 47 34.263726496483464 37.0 33.0 40.0 23.0 41.0 48 34.147593148178316 37.0 33.0 40.0 22.0 41.0 49 33.99337338822298 37.0 33.0 40.0 22.0 41.0 50 33.827124509132545 36.0 33.0 40.0 21.0 41.0 51 32.02829357629855 35.0 30.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 17.0 9 25.0 10 27.0 11 21.0 12 23.0 13 23.0 14 26.0 15 53.0 16 90.0 17 182.0 18 408.0 19 697.0 20 1127.0 21 1798.0 22 2752.0 23 4073.0 24 5497.0 25 7642.0 26 9406.0 27 10582.0 28 11352.0 29 12369.0 30 14752.0 31 17929.0 32 22793.0 33 32861.0 34 46771.0 35 54401.0 36 62872.0 37 95068.0 38 113089.0 39 103560.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.71317367258212 20.995446774389965 24.054442597568556 15.236936955459363 2 36.12483967237019 23.564326370909967 23.868138333288524 16.44269562343132 3 32.925245809340204 23.51340109663308 27.272224058554578 16.28912903547214 4 28.796344767269915 25.71457490838986 27.195045382010726 18.2940349423295 5 21.773401507830947 38.248992960608824 23.606869534824508 16.37073599673572 6 27.151078840864844 33.98803414207519 25.865769200963467 12.9951178160965 7 70.50540962424424 18.906087151806343 7.769583693790438 2.818919530158991 8 85.34996892293046 3.804845492401538 8.580750562629389 2.264435022038624 9 79.49783251278272 6.217786205576791 10.365032998628813 3.919348283011676 10 43.315741445107456 27.006685128396533 16.995756754320347 12.681816672175664 11 31.311294182024646 25.23616200563341 26.4259472180092 17.026596594332744 12 29.542827048595683 22.17605911127489 29.526537286948106 18.754576553181327 13 24.4880981940506 23.492050438162956 31.548681873607265 20.47116949417918 14 21.35967319258768 24.692273750235252 31.650374269135327 22.297678788041733 15 20.611767534030577 26.171795305701888 32.53666382518397 20.67977333508356 16 25.169105122734653 25.304167806686394 30.080231029939945 19.446496040639 17 24.674402458330633 25.267159998671513 29.0598277080938 20.998609834904055 18 24.555155076949355 24.683733486847203 30.083394090454043 20.6777173457494 19 24.057921964134056 26.548199506878866 28.106164963094994 21.287713565892087 20 25.93788698068477 25.811206407095376 29.236326484780147 19.01458012743971 21 26.207379736485432 25.8599175390124 29.243443370936852 18.689259353565323 22 26.03182987795331 23.49821840616544 29.75459395001415 20.715357765867097 23 24.734816914149793 25.076269296646046 29.89882950945676 20.290084279747397 24 23.86070514108041 24.56322088126029 31.083237518958594 20.492836458700708 25 23.50486083324503 26.150760953283175 29.224465007852295 21.119913205619493 26 22.88822218602275 26.44413481596523 28.495537712379743 22.17210528563227 27 22.97520635016029 26.000515578863798 29.74431400334335 21.27996406763256 28 21.515453922906726 27.489210009821303 29.623959550782146 21.371376516489825 29 23.410443476899378 25.420252127553578 29.178126171320844 21.991178224226196 30 23.699230901836 25.41345154744828 28.854861386780623 22.032456163935098 31 24.64387892436964 25.40791619154862 27.979642542531302 21.968562341550438 32 24.49458246810449 25.74272614696528 28.022976471574367 21.739714913355865 33 23.662064940795418 26.24185709608903 27.703507359651052 22.392570603464502 34 22.410125589317712 25.585047580337783 30.233006852770604 21.7718199775739 35 23.412499466233538 26.054287607603367 28.498384466842424 22.034828459320668 36 23.430370758138157 27.912901965683957 26.941209775754828 21.715517500423058 37 23.017275054997715 27.55626689272006 27.941211357285084 21.485246694997144 38 23.191401536298493 27.20374379842448 28.454734231747953 21.150120433529075 39 23.283446597258575 27.26668870265491 27.37866104485378 22.07120365523273 40 24.616202144871334 25.85454033613844 28.656695645572743 20.87256187341748 41 21.798389685892275 25.675669264066524 29.067260900301918 23.458680149739287 42 21.910836487168254 25.811680866172495 28.285194188192612 23.992288458466643 43 22.181752620200253 26.325994505763887 28.41551228137321 23.07674059266265 44 22.60623534119143 26.367114292447084 28.567655492101046 22.458994874260437 45 22.71978921364734 25.943738642635843 27.392894817167196 23.943577326549622 46 21.706819084009304 27.576668633035954 27.625063458901565 23.091448824053177 47 22.3171316102034 25.801559072527397 29.572876123479556 22.308433193789647 48 21.704604941649443 26.06504201335128 30.185244639007813 22.04510840599147 49 22.54518827326945 26.70856667494334 28.432434655123608 22.3138103966636 50 21.851845408580434 25.9764763189567 30.00115451708764 22.17052375537523 51 22.02359959449564 25.640242986308692 28.480829480989218 23.85532793820645 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 348.0 1 900.5 2 1453.0 3 5894.5 4 10336.0 5 7628.5 6 4921.0 7 3785.5 8 2650.0 9 2521.5 10 2393.0 11 2413.5 12 2434.0 13 2349.0 14 2264.0 15 2245.5 16 2227.0 17 2143.5 18 2060.0 19 2209.0 20 2358.0 21 2496.0 22 2634.0 23 2925.0 24 3216.0 25 3785.5 26 5517.0 27 6679.0 28 8114.0 29 9549.0 30 11027.5 31 12506.0 32 14325.5 33 16145.0 34 18276.5 35 20408.0 36 20918.5 37 21429.0 38 21993.0 39 22557.0 40 25257.5 41 27958.0 42 29975.5 43 31993.0 44 33453.5 45 34914.0 46 37231.0 47 39548.0 48 41028.0 49 42508.0 50 41719.5 51 40931.0 52 39778.5 53 38626.0 54 38186.0 55 37746.0 56 36563.5 57 35381.0 58 34246.5 59 33112.0 60 31262.0 61 29412.0 62 27063.0 63 24714.0 64 22196.5 65 19679.0 66 16932.5 67 14186.0 68 12014.0 69 9842.0 70 8320.0 71 6798.0 72 5672.0 73 4546.0 74 3852.5 75 2602.5 76 2046.0 77 1553.5 78 1061.0 79 812.0 80 563.0 81 435.5 82 308.0 83 235.0 84 162.0 85 135.5 86 109.0 87 72.0 88 35.0 89 28.0 90 21.0 91 16.0 92 11.0 93 6.5 94 2.0 95 3.0 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 632299.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.47059261803751 #Duplication Level Percentage of deduplicated Percentage of total 1 71.12289123530063 25.938939920596393 2 8.500818640325663 6.200597871022735 3 4.428225928599131 4.845000715877093 4 2.8093025186978626 4.098277108010258 5 2.030553515766974 3.702774503133055 6 1.5335796478144537 3.355833514965262 7 1.2467342093384177 3.182839481622677 8 0.9924288503014059 2.8955574641383923 9 0.8500077976548507 2.7900259299382784 >10 6.435452387106615 39.78155322203409 >50 0.032886348148829715 0.7838717746277502 >100 0.014415933427483823 0.833325851859381 >500 0.0013514937588266086 0.30756821661686934 >1k 9.00995839217739E-4 0.43276425350899245 >5k 4.504979196088695E-4 0.8510701720488157 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5180 0.8192326731498863 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1550 0.24513718984214747 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1084 0.1714378798637986 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 677 0.10706959840202183 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 636 0.10058532434813276 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009647334567981287 0.0 2 0.0 0.0 0.0 0.06294490423043528 0.0 3 0.0 0.0 0.0 0.13537899000314724 0.0 4 0.0 0.0 0.0 0.2119250544441791 0.0 5 0.0 0.0 0.0 0.46987263936840007 0.0 6 0.0 0.0 0.0 0.7475893525056975 0.0 7 0.0 0.0 0.0 0.9476529300220308 0.0 8 0.0 0.0 0.0 1.2508322802977705 0.0 9 0.0 0.0 0.0 1.4339734840637104 0.0 10 0.0 0.0 0.0 1.7521773717813882 0.0 11 0.0 0.0 0.0 2.14218273316896 0.0 12 0.0 0.0 0.0 2.4009210832217036 0.0 13 0.0 0.0 0.0 2.5369326853276695 0.0 14 0.0 0.0 0.0 2.6215445540796365 0.0 15 0.0 0.0 0.0 2.7227624905305876 0.0 16 0.0 0.0 0.0 2.906061847322232 0.0 17 0.0 0.0 0.0 3.0918916525251503 0.0 18 0.0 0.0 0.0 3.310775440100332 0.0 19 0.0 0.0 0.0 3.4543783874401193 0.0 20 0.0 0.0 0.0 3.610000964733457 0.0 21 0.0 0.0 0.0 3.7814388445972553 0.0 22 0.0 0.0 0.0 3.972487699648426 0.0 23 0.0 0.0 0.0 4.1752398786017375 0.0 24 0.0 0.0 0.0 4.337030423897555 0.0 25 0.0 0.0 0.0 4.485219808982776 0.0 26 0.0 0.0 0.0 4.633409194067997 0.0 27 0.0 0.0 0.0 4.798046493826496 0.0 28 0.0 0.0 0.0 4.960153345173723 0.0 29 0.0 0.0 0.0 5.134754285551614 0.0 30 0.0 0.0 0.0 5.410256856329047 0.0 31 0.0 0.0 0.0 5.62265636985034 0.0 32 0.0 0.0 0.0 5.826990079060698 0.0 33 0.0 0.0 0.0 6.028318880782668 0.0 34 0.0 0.0 0.0 6.226326468964841 0.0 35 0.0 0.0 0.0 6.439833053666066 0.0 36 0.0 0.0 0.0 6.635626499488375 0.0 37 0.0 0.0 0.0 6.840592820801551 0.0 38 0.0 0.0 0.0 7.081934338026788 0.0 39 0.0 0.0 0.0 7.421805190265998 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTACG 20 7.0308766E-4 45.0 23 CGTACGT 20 7.0308766E-4 45.0 24 CCAACGG 35 1.2107739E-7 45.0 2 TACGGGT 75 0.0 42.000004 4 CGTTATT 455 0.0 41.53846 1 CGAATAT 115 0.0 41.086956 14 CGTTTTT 1715 0.0 40.670555 1 TCGCAAC 50 1.0804797E-9 40.5 16 AAGGCGA 50 1.0804797E-9 40.5 6 CGGTTTT 420 0.0 39.642857 1 TCGTCCC 260 0.0 38.94231 38 CGTTTTA 245 0.0 38.57143 1 CGGGTAT 70 0.0 38.571426 6 TACGAAT 125 0.0 37.800003 12 CGTTGAT 280 0.0 37.767857 25 ACACGCG 330 0.0 37.5 36 AACCGAC 30 1.1393411E-4 37.499996 41 ACTACGG 30 1.1393411E-4 37.499996 2 TCGTTGA 285 0.0 37.105263 24 AATCGTT 285 0.0 37.105263 22 >>END_MODULE