##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936217.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 615363 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98161735430957 33.0 31.0 34.0 30.0 34.0 2 32.11646296576167 33.0 31.0 34.0 30.0 34.0 3 31.92444134600228 33.0 31.0 34.0 30.0 34.0 4 35.69842678224072 37.0 35.0 37.0 35.0 37.0 5 31.151530072493795 37.0 35.0 37.0 0.0 37.0 6 33.443424450283814 37.0 35.0 37.0 17.0 37.0 7 29.694814280351597 35.0 32.0 37.0 0.0 37.0 8 32.78562572010342 35.0 35.0 37.0 17.0 37.0 9 36.718068847168254 39.0 35.0 39.0 32.0 39.0 10 36.9272608200363 39.0 37.0 39.0 34.0 39.0 11 37.03367280775737 39.0 37.0 39.0 34.0 39.0 12 37.16126741451794 39.0 37.0 39.0 34.0 39.0 13 37.04801718660368 39.0 37.0 39.0 33.0 39.0 14 38.34824160698645 40.0 38.0 41.0 34.0 41.0 15 38.4282220412992 40.0 38.0 41.0 34.0 41.0 16 38.45314554173715 40.0 38.0 41.0 34.0 41.0 17 38.4264799801093 40.0 38.0 41.0 34.0 41.0 18 38.344718483236726 40.0 37.0 41.0 34.0 41.0 19 38.23036809167922 40.0 37.0 41.0 34.0 41.0 20 38.16997122023911 40.0 37.0 41.0 34.0 41.0 21 38.1032935031843 40.0 37.0 41.0 34.0 41.0 22 38.079358037451065 40.0 37.0 41.0 34.0 41.0 23 38.01011760538089 40.0 37.0 41.0 34.0 41.0 24 37.96258956095833 40.0 36.0 41.0 33.0 41.0 25 37.84911182505285 40.0 36.0 41.0 33.0 41.0 26 37.72929961664904 40.0 36.0 41.0 33.0 41.0 27 37.72340390956232 40.0 36.0 41.0 33.0 41.0 28 37.6546493695591 40.0 36.0 41.0 33.0 41.0 29 37.65093611413101 40.0 36.0 41.0 33.0 41.0 30 37.55848174167117 40.0 36.0 41.0 33.0 41.0 31 37.44298243475802 40.0 36.0 41.0 33.0 41.0 32 37.316834128798774 40.0 36.0 41.0 32.0 41.0 33 37.15896633369247 39.0 36.0 41.0 32.0 41.0 34 37.028074486116324 39.0 35.0 41.0 31.0 41.0 35 36.903853497854115 39.0 35.0 41.0 31.0 41.0 36 36.81806348447989 39.0 35.0 41.0 31.0 41.0 37 36.701173128706145 39.0 35.0 41.0 30.0 41.0 38 36.609246899797355 39.0 35.0 41.0 30.0 41.0 39 36.60291242729901 39.0 35.0 41.0 30.0 41.0 40 36.469264482914966 39.0 35.0 41.0 30.0 41.0 41 36.40110308874599 39.0 35.0 41.0 30.0 41.0 42 36.34244502838162 39.0 35.0 41.0 30.0 41.0 43 36.204155920976724 39.0 35.0 40.0 30.0 41.0 44 36.06467564673209 39.0 35.0 40.0 29.0 41.0 45 35.96135451757743 39.0 35.0 40.0 29.0 41.0 46 35.849105324824535 39.0 35.0 40.0 28.0 41.0 47 35.69973007801899 38.0 35.0 40.0 27.0 41.0 48 35.59788937586433 38.0 35.0 40.0 27.0 41.0 49 35.45381669031125 38.0 35.0 40.0 26.0 41.0 50 35.273168845055686 38.0 34.0 40.0 26.0 41.0 51 33.39854524890187 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 21.0 10 28.0 11 18.0 12 11.0 13 9.0 14 7.0 15 18.0 16 36.0 17 86.0 18 191.0 19 301.0 20 530.0 21 890.0 22 1481.0 23 2267.0 24 3603.0 25 4922.0 26 6066.0 27 6855.0 28 7772.0 29 8814.0 30 10976.0 31 13958.0 32 18616.0 33 26426.0 34 39409.0 35 50486.0 36 58756.0 37 96255.0 38 127300.0 39 129230.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.95972621038314 20.853869992183473 26.293748567918446 11.892655229514936 2 33.227704623124886 24.46182172148797 25.65770122675559 16.652772428631557 3 31.185007873401556 24.20538771424346 28.18450248064963 16.425101931705353 4 26.253772163747254 26.582846222473567 28.543965106774376 18.619416507004807 5 21.4419781494825 39.75052123705845 22.5163033851564 16.291197228302646 6 25.70060273367102 36.107143263407124 25.186597179225924 13.005656823695933 7 72.73056716117154 17.97638142039739 6.571243314921436 2.7218081035096358 8 88.09353178530395 3.4038445600401714 6.30115882820384 2.201464826452029 9 82.59547616610034 5.947383901859553 7.616480028861014 3.840659903179099 10 36.03889086604167 35.99436430204611 15.780116776601776 12.186628055310443 11 24.89554945617465 26.65808636528358 31.37237695474053 17.073987223801236 12 24.672754130488833 23.88330140096171 32.79413939414622 18.64980507440324 13 21.468466579888617 26.257672300739564 34.352731639698845 17.921129479672974 14 19.463146143008274 28.580366385369288 32.229269553093054 19.727217918529387 15 18.5393011929544 28.57419116846479 35.0350931076454 17.8514145309354 16 21.39728907977893 26.738851702166038 33.41897384145618 18.44488537659885 17 21.699712202391108 26.224683642012923 30.857071354631334 21.218532800964635 18 22.186741809306053 26.329987340805346 31.912383422467716 19.57088742742089 19 21.370313132248768 29.29620402916652 29.9462268612185 19.387255977366205 20 23.594853769238643 27.66204662938786 30.85934643454351 17.883753166829987 21 22.87722856265326 27.981045334217363 30.877547073840965 18.264179029288403 22 21.784702687681907 25.582298578237562 30.38547978997762 22.24751894410291 23 20.095455852886833 28.689895232570045 31.33613818185364 19.878510732689485 24 20.750191350471187 26.974322473076867 32.88368003926138 19.391806137190567 25 20.27843728010946 29.37566932038488 30.1763349437649 20.16955845574076 26 19.80749573828781 30.148708973402687 30.454382210175133 19.589413078134367 27 19.69471677692679 29.882037106553366 31.428603929713034 18.99464218680681 28 17.99913221951921 28.528852075929166 33.740572637613894 19.731443066937725 29 19.312340845972216 26.516056376480222 33.12630106132478 21.045301716222784 30 20.530808644653646 27.509941286687695 32.449139776034635 19.510110292624027 31 21.460503800195983 27.59200666923426 30.39360507537827 20.553884455191486 32 21.048876841799068 29.00190619195499 29.782746118957427 20.16647084728851 33 21.783077630601774 28.01224643015586 29.413208138935882 20.791467800306485 34 19.44787060645505 27.825364865940916 30.903222975707024 21.823541551897012 35 19.375718072097282 27.939768884382065 31.077104083280926 21.60740896023973 36 21.57555784146918 27.656033918191376 30.432281433885365 20.33612680645408 37 19.707067210735776 28.211640933887804 31.735902223565603 20.345389631810818 38 20.603611201843464 28.045885111714547 30.01967944124037 21.33082424520161 39 21.59668358351087 27.59216917494227 29.24322716835429 21.56792007319257 40 21.317498777144547 27.551867759355048 30.523934653204694 20.60669881029571 41 19.445920537958898 27.79627634420659 30.712603780207782 22.045199337626734 42 20.41835469470865 27.612969905567937 31.03566512773761 20.933010271985804 43 21.206507378571672 27.583881383833607 30.062255936739778 21.14735530085494 44 20.26689937484054 28.08797409008991 29.678092442997063 21.967034092072485 45 20.55924714355592 27.762962674063928 29.040582550462084 22.63720763191807 46 21.007112874839727 28.41997325156046 29.224864023348818 21.34804985025099 47 20.018103135872646 27.40918774771964 31.4069906705473 21.16571844586041 48 20.690064238506377 26.830667427193376 30.716991434324132 21.76227689997611 49 20.695751938286833 26.467304664076323 30.814494859131926 22.022448538504914 50 19.727542929945415 27.073450954964795 30.559198391843513 22.63980772324628 51 19.885335972426034 26.602834424559163 29.383144582953474 24.12868502006133 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 167.0 1 462.5 2 758.0 3 3314.5 4 5871.0 5 4473.5 6 3076.0 7 2490.0 8 1904.0 9 1845.5 10 1787.0 11 1780.0 12 1773.0 13 1851.5 14 1930.0 15 1919.0 16 1908.0 17 1891.0 18 1874.0 19 2122.5 20 2371.0 21 2777.0 22 3183.0 23 3879.5 24 4576.0 25 5484.0 26 7623.5 27 8855.0 28 10492.0 29 12129.0 30 13886.5 31 15644.0 32 17973.5 33 20303.0 34 22877.5 35 25452.0 36 27494.0 37 29536.0 38 31281.5 39 33027.0 40 35132.0 41 37237.0 42 40619.5 43 44002.0 44 46784.0 45 49566.0 46 52751.0 47 55936.0 48 54993.5 49 54051.0 50 50619.0 51 47187.0 52 42745.5 53 38304.0 54 33524.5 55 28745.0 56 25243.0 57 21741.0 58 19815.0 59 17889.0 60 15980.5 61 14072.0 62 12148.0 63 10224.0 64 8168.5 65 6113.0 66 4696.5 67 3280.0 68 2475.5 69 1671.0 70 1365.0 71 1059.0 72 857.5 73 656.0 74 556.5 75 398.5 76 340.0 77 245.5 78 151.0 79 119.5 80 88.0 81 58.5 82 29.0 83 24.0 84 19.0 85 16.5 86 14.0 87 9.0 88 4.0 89 4.5 90 5.0 91 4.5 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 615363.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.794664227908505 #Duplication Level Percentage of deduplicated Percentage of total 1 73.75787099685544 27.87653968491543 2 8.840738039089414 6.6826545142856535 3 3.950169875856455 4.478860323035812 4 2.4621988409234126 3.722319138201836 5 1.7491282988657768 3.305385837358241 6 1.2979498715009041 2.9433347746820195 7 0.9970583120997073 2.6378438885017554 8 0.7522279104714892 2.274416103930492 9 0.5926087488490802 2.0157703813144754 >10 5.518860088934886 40.4512539456914 >50 0.06255547177439233 1.5516943458079782 >100 0.015971609810595977 0.9752165888636853 >500 0.002218279140360552 0.6125285761896565 >1k 4.436558280721104E-4 0.47218189722148174 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2816 0.45761607376459096 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 861 0.13991741459918777 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG 807 0.13114210636648613 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGC 775 0.12594192371007032 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06288970900102867 0.0 2 0.0 0.0 0.0 0.269434463885544 0.0 3 0.0 0.0 0.0 0.4059392586164589 0.0 4 0.0 0.0 0.0 0.6043587281003245 0.0 5 0.0 0.0 0.0 1.2235054756298316 0.0 6 0.0 0.0 0.0 1.6089690150366531 0.0 7 0.0 0.0 0.0 1.967456606913318 0.0 8 0.0 0.0 0.0 2.5926160656393056 0.0 9 0.0 0.0 0.0 2.8352370877027058 0.0 10 0.0 0.0 0.0 3.6112018434647517 0.0 11 0.0 0.0 0.0 4.475244692969841 0.0 12 0.0 0.0 0.0 5.2512094487318866 0.0 13 0.0 0.0 0.0 5.542744688907198 0.0 14 0.0 0.0 0.0 5.658773764428475 0.0 15 0.0 0.0 0.0 5.881731595822303 0.0 16 0.0 0.0 0.0 6.323422110201621 0.0 17 0.0 0.0 0.0 6.906655096260256 0.0 18 0.0 0.0 0.0 7.5050011131640995 0.0 19 0.0 0.0 0.0 7.8847769527904665 0.0 20 0.0 0.0 0.0 8.24586463599534 0.0 21 0.0 0.0 0.0 8.709493420956411 0.0 22 0.0 0.0 0.0 9.213098610088679 0.0 23 0.0 0.0 0.0 9.739292092634754 0.0 24 0.0 0.0 0.0 10.132230894610172 0.0 25 0.0 0.0 0.0 10.499656300427553 0.0 26 0.0 0.0 0.0 10.83441805893432 0.0 27 0.0 0.0 0.0 11.167879771776983 0.0 28 0.0 0.0 0.0 11.524904812281532 0.0 29 0.0 0.0 0.0 11.914430994388677 0.0 30 0.0 0.0 0.0 12.343608569250994 0.0 31 0.0 0.0 0.0 12.762548284508494 0.0 32 0.0 0.0 0.0 13.155812097899938 0.0 33 0.0 0.0 0.0 13.540950625890735 0.0 34 0.0 0.0 0.0 13.938602093398531 0.0 35 0.0 0.0 0.0 14.366154611180718 0.0 36 0.0 0.0 0.0 14.778756603825709 0.0 37 0.0 0.0 0.0 15.193796182090896 0.0 38 0.0 0.0 0.0 15.609323277480122 0.0 39 0.0 0.0 0.0 16.01900016738088 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCGT 85 0.0 45.000004 21 CGAACGG 20 7.030729E-4 45.0 2 CGACGTT 35 1.2107012E-7 45.0 27 CAACCGG 35 1.2107012E-7 45.0 2 ACGGGCC 50 2.1827873E-11 45.0 5 TGTTGCG 25 3.8886858E-5 45.0 1 TTGCGCG 20 7.030729E-4 45.0 1 ACGTCGG 20 7.030729E-4 45.0 2 TTGCACG 40 6.8066583E-9 45.0 1 CGCGTGG 20 7.030729E-4 45.0 2 TTCGCTT 20 7.030729E-4 45.0 23 GCGTATG 20 7.030729E-4 45.0 1 TCGCGTG 20 7.030729E-4 45.0 1 ATCGATA 20 7.030729E-4 45.0 14 CGAAGTT 20 7.030729E-4 45.0 13 TCACGTA 20 7.030729E-4 45.0 30 GCGCGAC 30 2.1638516E-6 44.999996 9 TACGGGT 55 1.8189894E-12 44.999996 4 AGTTCGG 30 2.1638516E-6 44.999996 2 TATACGG 30 2.1638516E-6 44.999996 2 >>END_MODULE