##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936214.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 635795 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.833636628158448 31.0 31.0 34.0 30.0 34.0 2 31.936186978507223 33.0 31.0 34.0 30.0 34.0 3 31.321981141720208 33.0 31.0 34.0 28.0 34.0 4 35.368477260752286 37.0 35.0 37.0 33.0 37.0 5 31.138079097822413 37.0 35.0 37.0 0.0 37.0 6 33.39349318569665 37.0 35.0 37.0 17.0 37.0 7 29.53818762336917 35.0 32.0 37.0 0.0 37.0 8 32.65263017167483 35.0 35.0 37.0 17.0 37.0 9 36.60203367437617 39.0 35.0 39.0 32.0 39.0 10 36.96606610621348 39.0 37.0 39.0 34.0 39.0 11 37.04439953129546 39.0 37.0 39.0 34.0 39.0 12 37.08549768400192 39.0 37.0 39.0 34.0 39.0 13 36.99078161986175 39.0 37.0 39.0 33.0 39.0 14 38.31062685299507 40.0 38.0 41.0 34.0 41.0 15 38.3923670365448 40.0 38.0 41.0 34.0 41.0 16 38.423137961135275 40.0 38.0 41.0 34.0 41.0 17 38.38572810418452 40.0 38.0 41.0 34.0 41.0 18 38.20922152580627 40.0 37.0 41.0 34.0 41.0 19 38.014150787596634 40.0 37.0 41.0 34.0 41.0 20 37.78257614482656 39.0 35.0 41.0 34.0 41.0 21 37.65564844014187 39.0 35.0 41.0 33.0 41.0 22 37.575504683113266 39.0 35.0 41.0 33.0 41.0 23 37.49551191814972 39.0 35.0 41.0 33.0 41.0 24 37.4097421338639 39.0 35.0 41.0 33.0 41.0 25 37.27068473328667 39.0 35.0 41.0 33.0 41.0 26 37.11992072916585 39.0 35.0 41.0 33.0 41.0 27 37.057063990751736 39.0 35.0 41.0 32.0 41.0 28 36.939150197783874 39.0 35.0 41.0 32.0 41.0 29 36.87231418932203 39.0 35.0 41.0 32.0 41.0 30 36.676098427952404 39.0 35.0 41.0 31.0 41.0 31 36.47449885576326 39.0 35.0 40.0 31.0 41.0 32 36.23774487059508 39.0 35.0 40.0 30.0 41.0 33 35.87415125944683 38.0 35.0 40.0 29.0 41.0 34 35.53182708262884 38.0 35.0 40.0 25.0 41.0 35 35.20289244174616 38.0 34.0 40.0 24.0 41.0 36 34.96654582058682 38.0 34.0 40.0 23.0 41.0 37 34.787978829654215 38.0 34.0 40.0 22.0 41.0 38 34.61448108273893 38.0 34.0 40.0 21.0 41.0 39 34.556923222107756 38.0 34.0 40.0 21.0 41.0 40 34.402552709599796 38.0 34.0 40.0 20.0 41.0 41 34.28370308039541 38.0 33.0 40.0 19.0 41.0 42 34.19694712918472 38.0 33.0 40.0 18.0 41.0 43 34.0588664585283 38.0 33.0 40.0 18.0 41.0 44 33.826573030615215 38.0 33.0 40.0 18.0 41.0 45 33.74603449224986 37.0 33.0 40.0 18.0 41.0 46 33.681848709096485 37.0 33.0 40.0 18.0 41.0 47 33.59887227801414 37.0 33.0 40.0 18.0 41.0 48 33.491946303446866 37.0 33.0 40.0 18.0 41.0 49 33.37607562185925 37.0 32.0 40.0 17.0 41.0 50 33.2196415511289 37.0 32.0 40.0 17.0 41.0 51 31.561712501671135 35.0 29.0 39.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 15.0 9 31.0 10 26.0 11 23.0 12 19.0 13 9.0 14 22.0 15 42.0 16 99.0 17 168.0 18 367.0 19 700.0 20 1189.0 21 1902.0 22 3134.0 23 4787.0 24 7377.0 25 10963.0 26 13694.0 27 14297.0 28 13730.0 29 13562.0 30 14783.0 31 17201.0 32 21730.0 33 30161.0 34 43611.0 35 52436.0 36 59694.0 37 92223.0 38 111846.0 39 105938.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.52265274184289 18.871963447337585 20.074709615520725 20.530674195298797 2 40.3158250694013 22.26708294340157 21.723511509212877 15.693580477984256 3 30.86671018174097 22.74365164872325 31.00889437633199 15.380743793203786 4 26.60794753025739 24.74366737706336 32.07779237018221 16.570592722497032 5 20.224128846562177 37.87635951839823 26.584984153697338 15.314527481342258 6 25.416368483552088 32.56977484881133 29.78271298138551 12.231143686251071 7 67.30188189589413 18.012095093544303 12.29562988070054 2.39039312986104 8 81.9245196958139 2.8399090901941664 13.418633364527874 1.816937849464057 9 76.23259069354116 5.338355916608341 15.010498667023175 3.4185547228273263 10 39.07045509952107 28.80676947758318 20.80906581523919 11.313709607656557 11 26.625248704377984 24.135924315227392 32.890161136844426 16.3486658435502 12 24.567667251236642 22.484134036914412 35.07765867929128 17.870540032557663 13 22.414142923426574 22.15666999583199 36.67833185224797 18.75085522849346 14 20.393994919746145 23.540292075275836 36.49509668997082 19.570616315007193 15 20.237340652254264 24.330483882383472 36.600004718502035 18.83217074686023 16 24.162033359809374 23.70135027799841 34.63553503880968 17.501081323382536 17 24.309722473438768 23.11468319190934 34.042733900077856 18.532860434574037 18 23.673825682806566 23.429879127706258 34.55673605486045 18.339559134626725 19 23.165013880260148 24.653701271636297 33.40951092726429 18.771773920839262 20 24.290848465307214 24.727939036953735 33.312467068787896 17.668745428951155 21 25.17541031307261 23.511351929474124 33.96975440196919 17.34348335548408 22 24.334887817614167 22.13685228729386 34.38765639868196 19.140603496410005 23 22.65620207771373 23.31946618013668 34.74799267059351 19.276339071556084 24 21.66814775202699 23.465425176354014 35.464733129389195 19.401693942229805 25 21.90643210468783 24.722591401316464 34.218734025904574 19.15224246809113 26 21.64502709206584 25.36682421220676 33.54870673723448 19.43944195849291 27 21.11718399798677 24.720232150300017 34.45686109516432 19.705722756548887 28 20.455492729574782 25.431624973458426 34.12184745082928 19.991034846137513 29 21.664530233801777 23.993897404037465 34.48344198994959 19.858130372211168 30 21.970918299137303 24.2829842952524 34.10108604188457 19.64501136372573 31 22.576616676759016 25.048325324986827 32.860277290636134 19.51478070761802 32 22.488223405342918 24.811771089738045 33.16273327094425 19.537272233974786 33 22.278092781478307 25.234077021681518 32.49459338308732 19.99323681375286 34 22.15415346141445 25.218820531775176 32.70378030654535 19.92324570026502 35 22.188441242853436 26.144276063825604 32.337624548793244 19.329658144527716 36 22.98083501757642 26.922357049048827 30.369065500672388 19.727742432702364 37 22.934750981055213 26.642078028295284 30.809301740340832 19.613869250308667 38 22.694736510982313 26.61235146548809 30.822670829434017 19.87024119409558 39 22.96699407827995 26.626821538388945 29.822033831659578 20.584150551671527 40 23.523777318160725 26.31964705604794 30.18394293758208 19.97263268820925 41 22.094385768997867 26.150881966671648 30.544279209493624 21.210453054836858 42 22.151794210398005 26.385076950903986 30.511564262065605 20.951564576632407 43 22.088251716355114 25.71693706304705 30.84358952177982 21.351221698818016 44 21.93002461485227 26.400333440810325 30.749219481122058 20.920422463215342 45 21.80168135955772 26.008383205278427 30.422541857045115 21.76739357811873 46 22.232008744957103 26.246038424334888 30.61033823795406 20.911614592753956 47 21.794918173310577 26.197752420198334 31.373949150276424 20.63338025621466 48 21.730589262262207 26.030717448234103 31.389048356781668 20.849644932722025 49 22.204955999968544 25.953019448092547 31.146045502087937 20.695979049850973 50 21.427032298146415 26.381144865876582 31.601852798464915 20.589970037512092 51 21.708255019306538 25.805959468067535 30.99851367185964 21.487271840766283 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 221.0 1 608.0 2 995.0 3 10805.5 4 20616.0 5 15511.5 6 10407.0 7 8127.5 8 5848.0 9 5639.5 10 5431.0 11 5291.0 12 5151.0 13 4970.0 14 4789.0 15 4557.0 16 4325.0 17 4065.0 18 3805.0 19 3735.5 20 3666.0 21 3639.0 22 3612.0 23 3882.0 24 4152.0 25 4806.5 26 6432.0 27 7403.0 28 8671.0 29 9939.0 30 11197.0 31 12455.0 32 13734.5 33 15014.0 34 17144.5 35 19275.0 36 20374.0 37 21473.0 38 23359.5 39 25246.0 40 26896.0 41 28546.0 42 30136.0 43 31726.0 44 33641.0 45 35556.0 46 37789.0 47 40022.0 48 40799.0 49 41576.0 50 40991.0 51 40406.0 52 38786.0 53 37166.0 54 35455.5 55 33745.0 56 31811.5 57 29878.0 58 29005.0 59 28132.0 60 26420.5 61 24709.0 62 22782.0 63 20855.0 64 18603.0 65 16351.0 66 14377.5 67 12404.0 68 10657.0 69 8910.0 70 7409.0 71 5908.0 72 4956.5 73 4005.0 74 3403.0 75 2290.0 76 1779.0 77 1348.5 78 918.0 79 694.0 80 470.0 81 401.0 82 332.0 83 248.0 84 164.0 85 117.0 86 70.0 87 53.0 88 36.0 89 31.5 90 27.0 91 18.0 92 9.0 93 8.5 94 8.0 95 4.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 635795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.57646820510546 #Duplication Level Percentage of deduplicated Percentage of total 1 70.26120141708691 30.617350096041985 2 9.9130773353772 8.639537986396322 3 5.17228086470937 6.761691979466495 4 3.319594868698044 5.786248809986063 5 2.2555339733046615 4.914410223662289 6 1.756358796831632 4.592154796013454 7 1.3757517225958926 4.196528083847328 8 1.122317102246198 3.9125292417662028 9 0.9046318473246294 3.5478594839040785 >10 3.8939602072020336 23.454952975877667 >50 0.01748114203827846 0.5304811687788213 >100 0.006322965902186715 0.4805611350028591 >500 0.0 0.0 >1k 0.0011158175121505813 0.9872168206753424 >5k 3.7193917071686047E-4 1.5784771985810475 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9739 1.5317830432765278 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2823 0.444011041294757 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1921 0.30214141350592566 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1347 0.21186074127666937 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.572834010962653E-4 0.0 0.0 0.016200190312915325 0.0 2 1.572834010962653E-4 0.0 0.0 0.060554109422062144 0.0 3 1.572834010962653E-4 0.0 0.0 0.13589285854717323 0.0 4 1.572834010962653E-4 0.0 0.0 0.1967615347714279 0.0 5 1.572834010962653E-4 0.0 0.0 0.39541047035601096 0.0 6 1.572834010962653E-4 0.0 0.0 0.7288512806800934 0.0 7 1.572834010962653E-4 0.0 0.0 0.9506208762258275 0.0 8 1.572834010962653E-4 0.0 0.0 1.23436013180349 0.0 9 1.572834010962653E-4 0.0 0.0 1.4404013872395978 0.0 10 1.572834010962653E-4 0.0 0.0 1.6863926265541567 0.0 11 1.572834010962653E-4 0.0 0.0 1.996083643312703 0.0 12 1.572834010962653E-4 0.0 0.0 2.2093599351992386 0.0 13 1.572834010962653E-4 0.0 0.0 2.3521732633946475 0.0 14 1.572834010962653E-4 0.0 0.0 2.4621143607609373 0.0 15 1.572834010962653E-4 0.0 0.0 2.5726845917316115 0.0 16 1.572834010962653E-4 0.0 0.0 2.7244630737895075 0.0 17 1.572834010962653E-4 0.0 0.0 2.881903758286869 0.0 18 1.572834010962653E-4 0.0 0.0 3.0417036938006747 0.0 19 1.572834010962653E-4 0.0 0.0 3.1706760826996123 0.0 20 1.572834010962653E-4 0.0 0.0 3.303265989823764 0.0 21 1.572834010962653E-4 0.0 0.0 3.4583474233046814 0.0 22 1.572834010962653E-4 0.0 0.0 3.6046209863242082 0.0 23 1.572834010962653E-4 0.0 0.0 3.7689821404698054 0.0 24 1.572834010962653E-4 0.0 0.0 3.91619940389591 0.0 25 1.572834010962653E-4 0.0 0.0 4.053193246250757 0.0 26 1.572834010962653E-4 0.0 0.0 4.1882996877924485 0.0 27 1.572834010962653E-4 0.0 0.0 4.330641165784569 0.0 28 1.572834010962653E-4 0.0 0.0 4.493272202518107 0.0 29 1.572834010962653E-4 0.0 0.0 4.640804032746404 0.0 30 1.572834010962653E-4 0.0 0.0 4.849047255797859 0.0 31 1.572834010962653E-4 0.0 0.0 5.039517454525437 0.0 32 1.572834010962653E-4 0.0 0.0 5.227471118835473 0.0 33 1.572834010962653E-4 0.0 0.0 5.405987779079735 0.0 34 1.572834010962653E-4 0.0 0.0 5.585133572928381 0.0 35 1.572834010962653E-4 0.0 0.0 5.7729299538373215 0.0 36 1.572834010962653E-4 0.0 0.0 5.947986379257465 0.0 37 1.572834010962653E-4 0.0 0.0 6.130749691331325 0.0 38 1.572834010962653E-4 0.0 0.0 6.316029537822726 0.0 39 1.572834010962653E-4 0.0 0.0 6.554785740686857 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATACG 30 2.1639644E-6 45.000004 1 GTAAGCG 20 7.030906E-4 45.0 1 GCTAACG 25 3.888832E-5 45.0 1 CGTTATT 800 0.0 44.4375 1 CGTTTTT 3975 0.0 43.132076 1 CGTTTTA 515 0.0 41.504852 1 CTACGAA 55 6.002665E-11 40.909092 11 TACGAAT 55 6.002665E-11 40.909092 12 AGGCGAT 210 0.0 40.714287 7 CGGTTTT 875 0.0 40.62857 1 ACTACGG 50 1.0804797E-9 40.5 2 ATAGCGG 45 1.925946E-8 40.000004 2 CCATACG 30 1.13934795E-4 37.500004 2 CGAATAT 60 1.546141E-10 37.500004 14 TTAACGG 30 1.13934795E-4 37.500004 2 GCTACGA 60 1.546141E-10 37.500004 10 TCCGAAC 55 2.744855E-9 36.81818 17 GTTACGG 55 2.744855E-9 36.81818 2 GACGGGT 55 2.744855E-9 36.81818 4 AACGGGA 295 0.0 36.61017 4 >>END_MODULE