##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936213.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 669773 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93346402437841 31.0 31.0 34.0 30.0 34.0 2 32.07390712972903 33.0 31.0 34.0 30.0 34.0 3 31.955665576247476 33.0 31.0 34.0 30.0 34.0 4 35.70385488814867 37.0 35.0 37.0 35.0 37.0 5 31.191318551210635 37.0 35.0 37.0 0.0 37.0 6 33.409295388138965 37.0 35.0 37.0 17.0 37.0 7 29.5739944727542 35.0 32.0 37.0 0.0 37.0 8 32.62309618333376 35.0 33.0 37.0 17.0 37.0 9 36.5341989002244 39.0 35.0 39.0 32.0 39.0 10 36.81849223542902 38.0 37.0 39.0 33.0 39.0 11 36.91253305224307 39.0 37.0 39.0 33.0 39.0 12 36.95730045851356 39.0 37.0 39.0 33.0 39.0 13 36.81438935281058 39.0 37.0 39.0 33.0 39.0 14 38.047856512579635 40.0 37.0 41.0 33.0 41.0 15 38.13786461980402 40.0 37.0 41.0 33.0 41.0 16 38.18125842636236 40.0 37.0 41.0 33.0 41.0 17 38.147860543796185 40.0 37.0 41.0 33.0 41.0 18 38.0395581786665 40.0 37.0 41.0 33.0 41.0 19 37.963829536275725 40.0 37.0 41.0 33.0 41.0 20 37.91179250283305 40.0 36.0 41.0 33.0 41.0 21 37.82746691789606 40.0 36.0 41.0 33.0 41.0 22 37.82665768850043 40.0 36.0 41.0 33.0 41.0 23 37.79904982732956 40.0 36.0 41.0 33.0 41.0 24 37.72571005400337 40.0 36.0 41.0 33.0 41.0 25 37.61310772455742 39.0 36.0 41.0 33.0 41.0 26 37.452938532905925 39.0 36.0 41.0 33.0 41.0 27 37.44412509910074 39.0 36.0 41.0 33.0 41.0 28 37.347885029704095 39.0 36.0 41.0 32.0 41.0 29 37.302065028002026 39.0 36.0 41.0 32.0 41.0 30 37.161280015766536 39.0 35.0 41.0 32.0 41.0 31 37.06790957533373 39.0 35.0 41.0 31.0 41.0 32 36.95798875141279 39.0 35.0 41.0 31.0 41.0 33 36.82376417084594 39.0 35.0 41.0 31.0 41.0 34 36.68522618857434 39.0 35.0 41.0 30.0 41.0 35 36.57593692191235 39.0 35.0 41.0 30.0 41.0 36 36.472719861803924 39.0 35.0 41.0 30.0 41.0 37 36.36597921982523 39.0 35.0 40.0 30.0 41.0 38 36.25230488538654 39.0 35.0 40.0 30.0 41.0 39 36.21668834067662 39.0 35.0 40.0 30.0 41.0 40 36.09831689243968 39.0 35.0 40.0 29.0 41.0 41 36.00127804494956 39.0 35.0 40.0 29.0 41.0 42 35.95381718880875 39.0 35.0 40.0 29.0 41.0 43 35.823399868313594 39.0 35.0 40.0 28.0 41.0 44 35.67689650075474 38.0 35.0 40.0 27.0 41.0 45 35.547573580899794 38.0 35.0 40.0 27.0 41.0 46 35.42798530248308 38.0 34.0 40.0 26.0 41.0 47 35.27778814613309 38.0 34.0 40.0 26.0 41.0 48 35.17373348880889 38.0 34.0 40.0 26.0 41.0 49 35.01286853904233 38.0 34.0 40.0 24.0 41.0 50 34.88129709618035 38.0 34.0 40.0 24.0 41.0 51 32.84321404416123 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 14.0 10 27.0 11 21.0 12 12.0 13 14.0 14 20.0 15 28.0 16 79.0 17 161.0 18 285.0 19 521.0 20 894.0 21 1315.0 22 2027.0 23 2977.0 24 4193.0 25 5893.0 26 7034.0 27 8178.0 28 9476.0 29 11197.0 30 13636.0 31 17844.0 32 23134.0 33 32529.0 34 46794.0 35 56086.0 36 65554.0 37 103710.0 38 129581.0 39 126518.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.792598387811985 19.96273364259234 24.333020291949662 11.911647677646009 2 33.42565316905877 24.230448226488676 25.230936451603753 17.1129621528488 3 31.900658879948878 24.915755039393943 26.565866345761926 16.617719734895257 4 28.30645606795138 25.554329601223102 27.957979793153797 18.18123453767172 5 22.231562036690043 39.225677953575314 21.847551334556634 16.69520867517801 6 26.701733273810678 35.4494731797191 24.72569064444222 13.123102902028 7 71.7892479989489 18.370104498091145 6.712871375824346 3.127776127135612 8 85.75039602969962 4.187388861599377 7.145405980832312 2.916809127868696 9 80.07235287179387 5.886024070841913 8.63829984188673 5.403323215477482 10 40.22527035279117 29.30530194558455 16.543664793892855 13.925762907731427 11 28.134009582351034 27.12127840327992 26.725323355823537 18.019388658545505 12 26.624692246477537 24.277628390514398 29.907147645545578 19.190531717462484 13 23.658314085518526 25.25064462138665 31.542627128892924 19.5484141642019 14 20.50411109435585 27.72073523417636 30.949888992240655 20.82526467922714 15 20.32524452314441 27.360463918372346 33.71082441364462 18.603467144838625 16 23.794479622200356 27.057077547168966 29.971199197339992 19.177243633290683 17 23.891378123632933 25.624204021362463 28.563856709661334 21.920561145343274 18 23.1321656740418 26.18349799111042 30.43135510090732 20.252981233940453 19 23.34820902007098 27.674600200366395 28.374538836292295 20.60265194327033 20 24.41678001352697 28.214633913281066 28.931742545608735 18.43684352758323 21 24.412300884030856 27.19458682269963 29.85937026425371 18.5337420290158 22 23.10753046181318 24.66507309192816 30.110052211719495 22.117344234539164 23 22.25739168345096 26.642011547195843 29.806217927566504 21.294378841786695 24 22.081361894253725 26.024936806948023 30.45151118363983 21.442190115158418 25 22.160493182018385 28.071600378038532 28.823944829068953 20.943961610874133 26 20.92723952742198 28.210453392418028 28.480096988084025 22.382210092075972 27 22.145114837415065 27.387338695349023 29.159133019694732 21.308413447541184 28 19.98244181237524 27.16592039392451 31.01782245626503 21.83381533743522 29 22.095695108641287 25.989551683928735 30.106170299489527 21.80858290794045 30 22.68917976687624 26.54078322058369 29.422804442699242 21.347232569840827 31 22.542413623720275 26.34773273930123 29.558223457798388 21.55163017918011 32 23.339101456762215 27.352998702545488 28.106089675158596 21.201810165533697 33 22.635728821555958 26.449558283179524 27.976792137037478 22.93792075822704 34 20.94187135044261 25.62748871632628 31.4463258447265 21.984314088504615 35 21.13044270222896 26.25232728103402 29.432061310324542 23.18516870641247 36 22.614228999974618 26.311750399015786 28.701515289508535 22.37250531150106 37 21.621803207952546 27.37300548096146 29.60331336139259 21.401877949693404 38 20.42736867565578 27.66997176655374 28.307202589534064 23.59545696825641 39 21.25914302308394 26.947637483147275 29.21064300890003 22.582576484868756 40 22.244551512228767 25.045649794781216 29.784120888719013 22.925677804271 41 20.23879732386943 25.830094673867116 29.569122672905596 24.361985329357857 42 20.855722759800706 25.41114676166403 30.172610720348537 23.56051975818673 43 21.48728001875262 25.61300619762218 29.093737729051483 23.805976054573712 44 21.313340489986906 26.026579154429935 28.780795881589732 23.87928447399343 45 21.12193235618635 25.880410228540118 28.28435902910389 24.713298386169644 46 22.39997730574389 26.308913617001583 28.279581290974704 23.011527786279828 47 20.19818654977134 25.86473327530372 30.737428949808365 23.19965122511657 48 20.99099247058332 25.872497099763653 29.484765734062137 23.651744695590896 49 21.09625201374197 25.155687076069057 30.50944125845622 23.23861965173275 50 20.343011736812322 25.823226675306408 30.02524735992642 23.808514227954845 51 20.607578985716057 25.246762709156684 28.70808467943617 25.43757362569109 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 242.0 1 591.5 2 941.0 3 2519.0 4 4097.0 5 3170.5 6 2244.0 7 1768.5 8 1293.0 9 1328.0 10 1363.0 11 1421.0 12 1479.0 13 1440.5 14 1402.0 15 1388.0 16 1374.0 17 1532.0 18 1690.0 19 1864.5 20 2039.0 21 2168.5 22 2298.0 23 2785.5 24 3273.0 25 4283.0 26 6403.5 27 7514.0 28 9243.5 29 10973.0 30 12621.5 31 14270.0 32 15602.0 33 16934.0 34 20123.0 35 23312.0 36 25628.5 37 27945.0 38 29454.5 39 30964.0 40 32948.5 41 34933.0 42 38513.5 43 42094.0 44 45971.0 45 49848.0 46 55177.0 47 60506.0 48 58808.5 49 57111.0 50 54539.5 51 51968.0 52 47792.0 53 43616.0 54 39672.5 55 35729.0 56 32723.0 57 29717.0 58 28131.5 59 26546.0 60 24228.5 61 21911.0 62 19263.0 63 16615.0 64 14492.0 65 12369.0 66 10719.5 67 9070.0 68 7900.5 69 6731.0 70 5274.5 71 3818.0 72 3158.0 73 2498.0 74 2107.5 75 1289.0 76 861.0 77 678.0 78 495.0 79 365.5 80 236.0 81 205.5 82 175.0 83 159.5 84 144.0 85 99.5 86 55.0 87 43.5 88 32.0 89 25.5 90 19.0 91 15.0 92 11.0 93 7.0 94 3.0 95 2.5 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 669773.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.84627510715184 #Duplication Level Percentage of deduplicated Percentage of total 1 73.48099895225197 27.07501102543012 2 8.409139098943028 6.196909053079234 3 3.867948257166695 4.275584567513776 4 2.502400034719688 3.688164804297118 5 1.735238153893482 3.1968531197392758 6 1.3647194624916534 3.0170897255431104 7 0.9716245529826824 2.5060521906044335 8 0.7778456291052562 2.292857123272629 9 0.6531366747145798 2.165908823919337 >10 6.182470267964423 42.25290984952319 >50 0.03631927720195618 0.8620691439020299 >100 0.015625735509097426 1.2394189025222073 >500 8.44634351843104E-4 0.1811278848130382 >1k 0.001689268703686208 1.0500437858405343 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1922 0.2869628963842974 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTC 1846 0.27561576832747814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCG 1793 0.2677026395510121 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGC 1187 0.17722422372953225 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.493043165370954E-4 0.0 0.0 0.08092293956310571 0.0 2 1.493043165370954E-4 0.0 0.0 0.37564966040733205 0.0 3 1.493043165370954E-4 0.0 0.0 0.5156971093191275 0.0 4 1.493043165370954E-4 0.0 0.0 0.7459243654193286 0.0 5 1.493043165370954E-4 0.0 0.0 1.6339864401819721 0.0 6 1.493043165370954E-4 0.0 0.0 2.0777188689302197 0.0 7 1.493043165370954E-4 0.0 0.0 2.528916513505322 0.0 8 1.493043165370954E-4 0.0 0.0 3.186303419218153 0.0 9 1.493043165370954E-4 0.0 0.0 3.3998085918661993 0.0 10 1.493043165370954E-4 0.0 0.0 4.320717616267004 0.0 11 1.493043165370954E-4 0.0 0.0 5.057982331327181 0.0 12 1.493043165370954E-4 0.0 0.0 5.839142515449264 0.0 13 1.493043165370954E-4 0.0 0.0 6.0719079449305955 0.0 14 1.493043165370954E-4 0.0 0.0 6.180900096002675 0.0 15 1.493043165370954E-4 0.0 0.0 6.38007205426316 0.0 16 1.493043165370954E-4 0.0 0.0 6.782447187330633 0.0 17 1.493043165370954E-4 0.0 0.0 7.278884039816475 0.0 18 1.493043165370954E-4 0.0 0.0 7.796223496617511 0.0 19 1.493043165370954E-4 0.0 0.0 8.12006455918647 0.0 20 1.493043165370954E-4 0.0 0.0 8.42748214693635 0.0 21 1.493043165370954E-4 0.0 0.0 8.833888496550324 0.0 22 1.493043165370954E-4 0.0 0.0 9.267318927457511 0.0 23 1.493043165370954E-4 0.0 0.0 9.734342829585547 0.0 24 1.493043165370954E-4 0.0 0.0 10.098943970569133 0.0 25 1.493043165370954E-4 0.0 0.0 10.432041900763393 0.0 26 1.493043165370954E-4 0.0 0.0 10.726320708658008 0.0 27 1.493043165370954E-4 0.0 0.0 11.041054207918204 0.0 28 1.493043165370954E-4 0.0 0.0 11.35892309782568 0.0 29 1.493043165370954E-4 0.0 0.0 11.700083461112945 0.0 30 1.493043165370954E-4 0.0 0.0 12.118434156049885 0.0 31 1.493043165370954E-4 0.0 0.0 12.463177822934039 0.0 32 1.493043165370954E-4 0.0 0.0 12.809265228667027 0.0 33 1.493043165370954E-4 0.0 0.0 13.146842288357398 0.0 34 1.493043165370954E-4 0.0 0.0 13.48038813150127 0.0 35 1.493043165370954E-4 0.0 0.0 13.841405968887967 0.0 36 1.493043165370954E-4 0.0 0.0 14.174205290449152 0.0 37 1.493043165370954E-4 0.0 0.0 14.516410783952175 0.0 38 1.493043165370954E-4 0.0 0.0 14.876084882490037 0.0 39 1.493043165370954E-4 0.0 0.0 15.295779316275812 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCACGG 65 0.0 45.000004 2 TAGCACG 35 1.2109194E-7 45.0 1 GTATGCG 35 1.2109194E-7 45.0 1 CGTTTAC 20 7.031176E-4 45.0 33 CGTTTTT 790 0.0 39.588608 1 TCACGCC 35 6.244385E-6 38.571426 32 ACCGATC 35 6.244385E-6 38.571426 10 CACCGCT 35 6.244385E-6 38.571426 40 TATACGG 35 6.244385E-6 38.571426 2 ACGGGAT 360 0.0 38.125 5 TCACGAC 30 1.1394133E-4 37.499996 25 GTCCGAA 30 1.1394133E-4 37.499996 9 ACGACAA 30 1.1394133E-4 37.499996 32 TACGGGA 290 0.0 37.24138 4 GCTTGCG 55 2.744855E-9 36.818184 1 TTTACGG 80 0.0 36.5625 2 ACGGGAG 310 0.0 36.29032 5 ATTTACG 25 0.0021064822 36.0 1 TAATACG 25 0.0021064822 36.0 4 CGAACTA 25 0.0021064822 36.0 39 >>END_MODULE