##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936209.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 385836 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5681688593081 31.0 31.0 34.0 30.0 34.0 2 31.70028198509211 31.0 31.0 34.0 30.0 34.0 3 31.664738386257373 31.0 31.0 34.0 30.0 34.0 4 35.43904404980354 37.0 35.0 37.0 33.0 37.0 5 31.064752900195938 35.0 35.0 37.0 0.0 37.0 6 33.25595330658622 36.0 35.0 37.0 17.0 37.0 7 29.606138359302918 35.0 32.0 37.0 0.0 37.0 8 32.62629977503395 35.0 33.0 37.0 17.0 37.0 9 36.38986771581708 39.0 35.0 39.0 32.0 39.0 10 36.581944142070725 38.0 35.0 39.0 32.0 39.0 11 36.67300096414021 38.0 35.0 39.0 32.0 39.0 12 36.740480411366484 39.0 35.0 39.0 33.0 39.0 13 36.53003348572969 39.0 35.0 39.0 32.0 39.0 14 37.599959568314 39.0 36.0 41.0 33.0 41.0 15 37.69864139167937 39.0 36.0 41.0 33.0 41.0 16 37.776000684228535 39.0 36.0 41.0 33.0 41.0 17 37.760242693787 39.0 36.0 41.0 33.0 41.0 18 37.69414207072435 39.0 36.0 41.0 33.0 41.0 19 37.63174509377041 39.0 36.0 41.0 33.0 41.0 20 37.56284794575934 39.0 36.0 41.0 32.0 41.0 21 37.46650908676225 39.0 36.0 40.0 32.0 41.0 22 37.432103277039985 39.0 36.0 40.0 32.0 41.0 23 37.31509242268736 39.0 35.0 40.0 32.0 41.0 24 37.21219378181404 39.0 35.0 40.0 32.0 41.0 25 36.95266382608155 39.0 35.0 40.0 31.0 41.0 26 36.56374729159539 39.0 35.0 40.0 31.0 41.0 27 36.49915767320831 38.0 35.0 40.0 30.0 41.0 28 36.23499362423413 38.0 35.0 40.0 30.0 41.0 29 36.195339470655924 38.0 35.0 40.0 30.0 41.0 30 35.97125721809266 38.0 35.0 40.0 29.0 41.0 31 35.742864844130665 38.0 34.0 40.0 28.0 41.0 32 35.686750329155394 38.0 34.0 40.0 28.0 41.0 33 35.50809411252449 38.0 34.0 40.0 27.0 41.0 34 35.512979607916314 38.0 34.0 40.0 27.0 41.0 35 35.49605791061487 38.0 34.0 40.0 27.0 41.0 36 35.38922236390591 38.0 34.0 40.0 27.0 41.0 37 35.30211281477104 38.0 34.0 40.0 26.0 41.0 38 35.176147378679026 38.0 34.0 40.0 25.0 41.0 39 35.12059009527364 38.0 34.0 40.0 25.0 41.0 40 34.97153972153972 38.0 34.0 40.0 25.0 41.0 41 34.848837329849985 38.0 33.0 40.0 25.0 41.0 42 34.80492489036793 38.0 33.0 40.0 25.0 41.0 43 34.56063975367773 38.0 33.0 40.0 24.0 41.0 44 34.33128842306058 37.0 33.0 40.0 23.0 41.0 45 34.24199659959154 37.0 33.0 40.0 23.0 41.0 46 33.96193978788916 37.0 33.0 40.0 22.0 41.0 47 33.799277413201466 37.0 32.0 40.0 21.0 41.0 48 33.68048600959993 37.0 32.0 40.0 21.0 41.0 49 33.431688593081 37.0 32.0 40.0 19.0 41.0 50 33.182963746254885 37.0 31.0 40.0 18.0 41.0 51 30.407535844244705 34.0 26.0 38.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 7.0 10 7.0 11 6.0 12 5.0 13 2.0 14 3.0 15 10.0 16 26.0 17 48.0 18 111.0 19 264.0 20 528.0 21 981.0 22 1485.0 23 2221.0 24 3108.0 25 4248.0 26 5481.0 27 6590.0 28 7968.0 29 9639.0 30 11760.0 31 14418.0 32 17970.0 33 23781.0 34 31701.0 35 39036.0 36 42800.0 37 55867.0 38 59440.0 39 46312.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.13622368052748 22.320623269990357 26.53821831037021 11.004934739111954 2 28.678765071170137 25.761981774640002 28.276003276003276 17.283249878186588 3 29.877720067593483 25.897790771208495 28.244901979079195 15.979587182118829 4 26.453726453726457 25.94833037871013 28.746151214505645 18.851791953057777 5 20.30707347163043 39.22806581034429 23.259882437097627 17.204978280927648 6 24.38341678848008 34.752070828020194 26.38167511585233 14.482837267647394 7 69.7731678744337 17.702339854238588 7.816533449444842 4.7079588218828725 8 80.94319866471766 3.258897562695031 9.189914886117418 6.6079888864699 9 75.50954291460621 5.649291408785079 11.172104210078894 7.669061466529821 10 36.77624690282918 33.440114452772676 17.3895126426772 12.394126001720938 11 24.36682943012057 24.196290651986853 31.33922184555096 20.097658072341616 12 23.195606423454525 22.51604308566334 34.07069324790844 20.2176572429737 13 20.099990669610925 26.98244850143584 35.93417928860967 16.983381540343565 14 17.762987383240546 30.745705429249732 31.384577903565248 20.106729283944475 15 14.773116038938824 28.18684622482091 38.9525601550918 18.087477581148466 16 18.149420997522263 28.744336972185074 32.99225577706591 20.11398625322676 17 17.702599031712957 27.526462020132907 29.279797634228018 25.491141313926125 18 18.676069625436714 27.56611617371111 33.31285831285831 20.444955887993864 19 18.858271389916958 29.204376989187114 28.81120476057185 23.126146860324077 20 19.69074943758488 31.039094330233567 30.065364559035444 19.204791673146104 21 19.08168237282161 29.834437429374137 31.960729429083862 19.12315076872039 22 17.831151058999158 26.731305528773884 28.778807576275934 26.658735835951024 23 16.145201588239562 28.892327310048827 30.431841507790875 24.530629593920732 24 19.766429260100146 26.53536735815217 30.906913818306226 22.79128956344146 25 16.505458277610177 30.222685285976425 28.90321276397226 24.36864367244114 26 16.88722669735328 29.069604702516095 30.73300573300573 23.31016286712489 27 20.19718222249868 27.30071843995895 29.703293627344262 22.798805710198113 28 14.930177588405435 26.758519163582456 32.87303413885692 25.438269109155186 29 17.077203786064548 23.889424522335915 32.923832923832926 26.109538767766615 30 19.45437958096186 25.757316580101392 30.25249069552867 24.53581314340808 31 18.40185985755606 26.055889030572576 29.75201899252532 25.790232119346047 32 18.09447537295639 25.61632403404555 29.898454265542874 26.39074632745519 33 17.616292932748628 24.361905058107588 30.325578743300262 27.696223265843518 34 15.438424615639807 22.874485532713383 33.0430545620419 28.644035289604908 35 14.771301796618253 22.904290942265625 33.075451746337826 29.248955514778302 36 18.189075151100468 22.267751065219418 32.858001845343615 26.685171938336495 37 15.649654257249193 24.122943426740896 34.1201961455126 26.10720617049731 38 16.12576327766201 25.379694999948164 31.335075005961084 27.159466716428742 39 17.842295690396956 23.502213375631097 30.929980613524915 27.72551032044703 40 19.03710384723043 22.427404389429707 32.91268829243513 25.62280347090474 41 16.145979120662666 23.57348718108212 30.395556661379448 29.88497703687577 42 18.355207912169938 22.33798816077297 33.05601343576027 26.250790491296822 43 20.28296996651427 22.209695310961134 31.022247794399693 26.4850869281249 44 18.04419494292912 23.89771820151567 29.907266299671363 28.150820555883847 45 18.845053338724224 22.516561440612072 29.553489047159932 29.084896173503765 46 22.03500969323754 22.91750899345836 29.887568811619445 25.159912501684655 47 15.522398117334827 23.252625467815342 34.55172664033424 26.673249774515597 48 17.011631885049606 22.056521423610032 32.33575923449341 28.596087456846952 49 18.615162918960387 19.69074943758488 34.8044246778424 26.88966296561233 50 17.84281404534569 20.494199608123658 33.271649094433904 28.391337252096744 51 16.831503540364302 20.56754683336962 30.34916389346769 32.251785732798396 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 151.0 1 298.0 2 445.0 3 787.5 4 1130.0 5 886.5 6 643.0 7 665.0 8 687.0 9 885.0 10 1083.0 11 1291.5 12 1500.0 13 1528.5 14 1557.0 15 1479.5 16 1402.0 17 1337.5 18 1273.0 19 1245.0 20 1217.0 21 1277.5 22 1338.0 23 1654.5 24 1971.0 25 2134.0 26 2876.0 27 3455.0 28 4324.0 29 5193.0 30 5854.5 31 6516.0 32 7378.0 33 8240.0 34 9042.0 35 9844.0 36 11032.5 37 12221.0 38 13751.5 39 15282.0 40 17996.0 41 20710.0 42 24459.5 43 28209.0 44 33379.0 45 38549.0 46 44785.0 47 51021.0 48 51709.0 49 52397.0 50 47960.0 51 43523.0 52 34805.5 53 26088.0 54 20968.0 55 15848.0 56 13091.5 57 10335.0 58 9076.5 59 7818.0 60 6479.5 61 5141.0 62 4483.5 63 3826.0 64 2901.5 65 1977.0 66 1600.0 67 1223.0 68 913.0 69 603.0 70 490.0 71 377.0 72 299.0 73 221.0 74 213.0 75 170.5 76 136.0 77 101.0 78 66.0 79 56.0 80 46.0 81 39.0 82 32.0 83 26.5 84 21.0 85 15.5 86 10.0 87 7.0 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 385836.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.803137005122466 #Duplication Level Percentage of deduplicated Percentage of total 1 76.00344888519398 34.811963821503625 2 10.163363639116831 9.310278743906965 3 4.046747432217107 5.560611811889031 4 2.205647647728647 4.041023255757652 5 1.4073615575394787 3.223078711786164 6 0.9559326032375001 2.627082719625036 7 0.7004359753065129 2.245751545819655 8 0.5707790169042393 2.091477560873119 9 0.40511583824158726 1.6700018617732009 >10 3.441890197030243 28.78484317574535 >50 0.06317640476250203 1.9617583420386282 >100 0.031588202381251 2.148038832570677 >500 0.003948525297656375 1.2574579021074674 >1k 5.640750425223392E-4 0.2666317146034326 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 1032 0.26747115354710294 TruSeq Adapter, Index 16 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 916 0.23740656652049058 TruSeq Adapter, Index 16 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCG 791 0.2050093822245721 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTC 722 0.1871261364932251 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGCT 672 0.17416726277485772 TruSeq Adapter, Index 27 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGC 661 0.17131631055681687 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 586 0.1518779999792658 No Hit TCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 519 0.1345131091966535 TruSeq Adapter, Index 16 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3146414538819602 0.0 2 0.0 0.0 0.0 1.5796867062689848 0.0 3 0.0 0.0 0.0 2.2672845457655586 0.0 4 0.0 0.0 0.0 3.173368996153806 0.0 5 0.0 0.0 0.0 5.844452046983693 0.0 6 0.0 0.0 0.0 7.380337760084595 0.0 7 0.0 0.0 0.0 8.998901087508683 0.0 8 0.0 0.0 0.0 11.767434868700692 0.0 9 0.0 0.0 0.0 12.716542779833919 0.0 10 0.0 0.0 0.0 15.02270394675458 0.0 11 0.0 0.0 0.0 17.881431489026426 0.0 12 0.0 0.0 0.0 20.031567816377944 0.0 13 0.0 0.0 0.0 20.76192993914513 0.0 14 0.0 0.0 0.0 21.00529758757607 0.0 15 0.0 0.0 0.0 21.524170891259498 0.0 16 0.0 0.0 0.0 22.683471734104646 0.0 17 0.0 0.0 0.0 24.190588747550773 0.0 18 0.0 0.0 0.0 25.729325412869716 0.0 19 0.0 0.0 0.0 26.682061808644086 0.0 20 0.0 0.0 0.0 27.454151504784416 0.0 21 0.0 0.0 0.0 28.48360443297152 0.0 22 0.0 0.0 0.0 29.503208617132668 0.0 23 0.0 0.0 0.0 30.577240070910957 0.0 24 0.0 0.0 0.0 31.393130760219368 0.0 25 0.0 0.0 0.0 32.0540333198561 0.0 26 0.0 0.0 0.0 32.67683679076084 0.0 27 0.0 0.0 0.0 33.3201152821406 0.0 28 0.0 0.0 0.0 33.95535927181497 0.0 29 0.0 0.0 0.0 34.59967447309219 0.0 30 0.0 0.0 0.0 35.326926466166974 0.0 31 0.0 0.0 0.0 36.01063664354803 0.0 32 0.0 0.0 0.0 36.59145336360526 0.0 33 0.0 0.0 0.0 37.17123337376502 0.0 34 0.0 0.0 0.0 37.75205009382225 0.0 35 0.0 0.0 0.0 38.40154884458682 0.0 36 0.0 0.0 0.0 38.98210638716968 0.0 37 0.0 0.0 0.0 39.55074176593164 0.0 38 0.0 0.0 0.0 40.12067303206544 0.0 39 0.0 0.0 0.0 40.7655065882914 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATT 35 1.2091186E-7 45.000004 15 GGCGTCA 60 0.0 45.000004 36 ATTACGG 30 2.161738E-6 45.000004 2 AGGCGTC 60 0.0 45.000004 35 ATCCGGG 35 1.2091186E-7 45.000004 3 AACGCAT 35 1.2091186E-7 45.000004 14 TTAACGG 30 2.161738E-6 45.000004 2 ACGTCCG 30 2.161738E-6 45.000004 23 CGTCATA 60 0.0 45.000004 38 AGTACGG 30 2.161738E-6 45.000004 2 TCACGAC 20 7.027454E-4 45.0 25 ACAACGG 20 7.027454E-4 45.0 2 CGCGGGC 25 3.8859722E-5 45.0 4 CGTTGAG 20 7.027454E-4 45.0 2 ATTCGTG 20 7.027454E-4 45.0 1 GTTAGCG 20 7.027454E-4 45.0 1 GTCAGAT 20 7.027454E-4 45.0 10 GGGACGA 45 3.8380676E-10 45.0 7 GCACAAG 20 7.027454E-4 45.0 15 CTACGTA 20 7.027454E-4 45.0 36 >>END_MODULE