SRR2936208.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936208.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76848
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	179	0.23292733708099103	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	84	0.10930668332292316	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGATGG	20	6.9921993E-4	45.000004	2
AGGTACA	20	6.9921993E-4	45.000004	7
GGTACAT	20	6.9921993E-4	45.000004	8
GGCCGGT	20	6.9921993E-4	45.000004	9
AGGCGAT	55	1.8189894E-12	45.000004	7
AACGGGA	20	6.9921993E-4	45.000004	4
GCGGGAC	20	6.9921993E-4	45.000004	5
TGGGATA	35	1.1922384E-7	45.000004	6
CGGTAGT	20	6.9921993E-4	45.000004	12
CGCCGGT	20	6.9921993E-4	45.000004	28
TAATGGG	55	1.8189894E-12	45.000004	3
ATGGGGT	25	3.85679E-5	45.0	5
ATCAACG	25	3.85679E-5	45.0	15
AACATAC	25	3.85679E-5	45.0	16
CATACGA	25	3.85679E-5	45.0	18
ACATACG	25	3.85679E-5	45.0	17
TCAACGC	25	3.85679E-5	45.0	16
AACGCAA	30	2.1390588E-6	44.999996	18
GGCGATC	30	2.1390588E-6	44.999996	8
CGCAAGC	30	2.1390588E-6	44.999996	20