##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936204.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 593835 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.787057010785823 31.0 31.0 34.0 30.0 34.0 2 31.901634292353936 33.0 31.0 34.0 30.0 34.0 3 31.782616383338805 33.0 31.0 34.0 30.0 34.0 4 35.56381991630672 37.0 35.0 37.0 33.0 37.0 5 31.05465154462098 37.0 35.0 37.0 0.0 37.0 6 33.31001372435104 37.0 35.0 37.0 17.0 37.0 7 29.702999991580153 35.0 32.0 37.0 0.0 37.0 8 32.722045686091256 35.0 35.0 37.0 17.0 37.0 9 36.56972728114712 39.0 35.0 39.0 32.0 39.0 10 36.73336027684458 38.0 35.0 39.0 33.0 39.0 11 36.796839189337106 39.0 37.0 39.0 33.0 39.0 12 36.89648471376729 39.0 35.0 39.0 33.0 39.0 13 36.747556139331635 39.0 35.0 39.0 33.0 39.0 14 38.0236260914227 40.0 37.0 41.0 33.0 41.0 15 38.07843424520279 40.0 37.0 41.0 33.0 41.0 16 38.12757584177423 40.0 37.0 41.0 33.0 41.0 17 38.07610194751067 40.0 37.0 41.0 33.0 41.0 18 37.97331918798993 40.0 37.0 41.0 33.0 41.0 19 37.86105904838886 40.0 37.0 41.0 33.0 41.0 20 37.832855927993464 40.0 36.0 41.0 33.0 41.0 21 37.76605454377058 39.0 36.0 41.0 33.0 41.0 22 37.76972559717767 39.0 36.0 41.0 33.0 41.0 23 37.706069867892595 39.0 36.0 41.0 33.0 41.0 24 37.671981274259686 39.0 36.0 41.0 33.0 41.0 25 37.57716369025066 39.0 36.0 41.0 33.0 41.0 26 37.398937415275284 39.0 36.0 41.0 32.0 41.0 27 37.393974757297904 39.0 36.0 41.0 32.0 41.0 28 37.28547660545438 39.0 36.0 41.0 32.0 41.0 29 37.298187206884066 39.0 36.0 41.0 32.0 41.0 30 37.13762577146851 39.0 36.0 41.0 32.0 41.0 31 37.0631623262354 39.0 35.0 41.0 31.0 41.0 32 36.96207027204527 39.0 35.0 41.0 31.0 41.0 33 36.80130002441756 39.0 35.0 41.0 31.0 41.0 34 36.66685695521483 39.0 35.0 41.0 30.0 41.0 35 36.515466417439185 39.0 35.0 40.0 30.0 41.0 36 36.41242432662271 39.0 35.0 40.0 30.0 41.0 37 36.25352833699597 39.0 35.0 40.0 30.0 41.0 38 36.187925939023465 39.0 35.0 40.0 30.0 41.0 39 36.17136241548578 39.0 35.0 40.0 30.0 41.0 40 36.03579445468859 39.0 35.0 40.0 29.0 41.0 41 35.98720856803658 39.0 35.0 40.0 28.0 41.0 42 35.93128057457038 39.0 35.0 40.0 28.0 41.0 43 35.7509392339623 38.0 35.0 40.0 27.0 41.0 44 35.609965731221635 38.0 35.0 40.0 27.0 41.0 45 35.50002273358761 38.0 34.0 40.0 26.0 41.0 46 35.39079373900157 38.0 34.0 40.0 26.0 41.0 47 35.17891333451211 38.0 34.0 40.0 26.0 41.0 48 35.088583529094784 38.0 34.0 40.0 25.0 41.0 49 34.92921939596016 38.0 34.0 40.0 24.0 41.0 50 34.74646997903458 38.0 34.0 40.0 24.0 41.0 51 32.67613562689973 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 11.0 10 10.0 11 12.0 12 4.0 13 5.0 14 3.0 15 24.0 16 46.0 17 110.0 18 252.0 19 418.0 20 716.0 21 1201.0 22 1867.0 23 2683.0 24 3887.0 25 5281.0 26 6502.0 27 7519.0 28 8807.0 29 10367.0 30 13018.0 31 16211.0 32 20992.0 33 29184.0 34 41328.0 35 50130.0 36 59276.0 37 91742.0 38 114480.0 39 107731.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.58870730084956 20.3386462569569 25.40992026404641 10.662726178147128 2 31.618210445662516 26.704219185463973 26.007561022843046 15.670009346030463 3 30.659189842296257 26.489681477178006 27.423442538752347 15.427686141773389 4 26.311180715181827 26.45347613394293 29.023213518906765 18.212129631968477 5 21.79191189471823 39.80853267321731 22.170636624651628 16.228918807412835 6 25.257015837732705 37.761162612510205 24.308772638864333 12.673048910892756 7 72.7282831089444 17.702392078607694 6.8434834592100495 2.7258413532378523 8 87.2136199449342 4.021319053272373 6.269249875807254 2.4958111259861746 9 81.62755647612552 6.041408808844208 7.3114585701415375 5.019576144888731 10 37.061978495710086 36.27606995209106 14.944218511876194 11.71773304032265 11 25.6594845369505 26.196839189337105 30.579369690233822 17.564306583478576 12 25.21457980752229 24.54419156836495 31.365446630798115 18.875781993314643 13 21.89732838246314 26.81435078767671 34.41174737090269 16.876573458957456 14 20.46982747732956 29.771737940673752 30.147936716427964 19.610497865568718 15 18.849512069851052 28.094672762636087 35.700657590071316 17.355157577441545 16 22.364629905613512 27.521786354795523 31.4735574696675 18.640026269923464 17 22.487222881776926 26.169558884201837 30.421076561671175 20.922141672350065 18 22.712706391506057 27.134810174543432 31.20075441831485 18.951729015635657 19 21.94060639739995 29.63634679666911 29.031633366170738 19.391413439760203 20 23.467966691084225 29.029780999772665 29.830171680685712 17.6720806284574 21 22.380964409305616 28.76977611626125 30.846615642392244 18.00264383204089 22 21.84849326833211 25.653759040810996 29.874460077294195 22.623287613562688 23 20.030143053205016 28.525768942551384 30.85402510798454 20.590062896259063 24 21.159244571303475 26.642080712655876 31.72598449064134 20.47269022539931 25 19.934998779122147 29.159951838473653 30.08899778558017 20.816051596824035 26 19.989727786337955 30.190204349693094 29.436122828731886 20.383945035237062 27 20.793318009211312 28.92436451202775 29.799018245809023 20.483299232951914 28 18.553470240049847 28.112354441890425 32.35461028736939 20.979565030690342 29 21.546725942391404 26.052017816396813 31.535022354694487 20.8662338865173 30 21.174568693323902 27.451733225559288 31.84672510040668 19.52697298071013 31 22.111024106022718 27.693888032871083 28.46043092778297 21.73465693332323 32 22.813407764783147 28.912913519748752 28.108481312148996 20.165197403319105 33 21.650458460683524 27.210925593809726 29.26856786817887 21.870048077327876 34 21.231150066937783 28.57847718642384 29.131492754721428 21.058879991916946 35 20.75071358205562 28.213055815167515 30.00833564879133 21.027894953985534 36 22.326403799035084 27.35642055453114 29.445216263776974 20.871959382656797 37 21.389948386336272 28.143844670657675 30.48439381309623 19.981813129909824 38 20.701373277088752 28.176008487206044 29.268399471233593 21.85421876447161 39 22.5520557057095 28.24926115840259 28.947098099640474 20.251585036247445 40 21.506310675524347 28.159000395732818 30.21243274646998 20.122256182272853 41 20.59107327793074 28.868119932304424 28.722119780747178 21.81868700901766 42 21.88907693214445 27.66458696439247 29.281534432965383 21.164801670497695 43 22.957555549942324 26.193302853486237 28.794530467217328 22.05461112935411 44 21.246979379794052 27.024678572330696 29.37718389788409 22.35115814999116 45 21.440972660755932 27.253866814855975 28.273678715468105 23.031481808919988 46 22.215261815150672 29.099665732063617 27.73228253639479 20.952789916390916 47 20.044625190499044 27.7747185666052 31.01501258767166 21.165643655224095 48 22.3737233406586 26.481261629914034 29.23219412799852 21.912820901428848 49 21.830643192132495 25.305177364082613 30.834154268441573 22.03002517534332 50 20.912879840359697 26.134363922638443 30.051950457618698 22.900805779383163 51 20.192982899290207 26.170232471982956 29.20642939537077 24.430355233356067 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 152.0 1 432.0 2 712.0 3 2106.0 4 3500.0 5 2801.5 6 2103.0 7 1753.0 8 1403.0 9 1471.5 10 1540.0 11 1498.0 12 1456.0 13 1513.5 14 1571.0 15 1541.0 16 1511.0 17 1698.0 18 1885.0 19 1908.0 20 1931.0 21 2245.5 22 2560.0 23 3020.0 24 3480.0 25 4229.5 26 6317.0 27 7655.0 28 8833.5 29 10012.0 30 11928.5 31 13845.0 32 15875.5 33 17906.0 34 19869.5 35 21833.0 36 24267.0 37 26701.0 38 29018.0 39 31335.0 40 33655.5 41 35976.0 42 39044.0 43 42112.0 44 46285.0 45 50458.0 46 56248.0 47 62038.0 48 58800.5 49 55563.0 50 52849.0 51 50135.0 52 43991.5 53 37848.0 54 33583.5 55 29319.0 56 25542.0 57 21765.0 58 19205.0 59 16645.0 60 14488.0 61 12331.0 62 10578.0 63 8825.0 64 7023.5 65 5222.0 66 4107.5 67 2993.0 68 2397.0 69 1801.0 70 1420.5 71 1040.0 72 848.0 73 656.0 74 572.0 75 374.5 76 261.0 77 191.5 78 122.0 79 89.5 80 57.0 81 54.0 82 51.0 83 42.0 84 33.0 85 22.5 86 12.0 87 7.5 88 3.0 89 6.0 90 9.0 91 5.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 593835.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.441774544799465 #Duplication Level Percentage of deduplicated Percentage of total 1 74.72813659367627 29.474103156807573 2 9.191451914556511 7.250543483066066 3 3.7866441862601214 4.480558988275419 4 2.3221154137437487 3.663534104635386 5 1.6054992447073115 3.1661869620795797 6 1.1548269915195328 2.7329055502657473 7 0.8850465671650444 2.4435465014640676 8 0.706778194802155 2.230126897005356 9 0.5397802580266514 1.9160902116738783 >10 4.982287225195916 37.582005132984015 >50 0.07417228085467621 1.8570779805747666 >100 0.020627794077896715 1.6535056735865195 >500 8.777784713998602E-4 0.18124167087992946 >1k 0.0017555569427997204 1.3685736867017404 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG 2373 0.3996059511480462 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC 2166 0.36474778347520775 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 1804 0.30378808928406037 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1563 0.26320442547172196 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08992396877920635 0.0 2 0.0 0.0 0.0 0.38461862301817845 0.0 3 0.0 0.0 0.0 0.5344919043168557 0.0 4 0.0 0.0 0.0 0.8295233524463866 0.0 5 0.0 0.0 0.0 1.827948841008024 0.0 6 0.0 0.0 0.0 2.2329434944050113 0.0 7 0.0 0.0 0.0 2.700413414500661 0.0 8 0.0 0.0 0.0 3.468471881920062 0.0 9 0.0 0.0 0.0 3.7045643992017987 0.0 10 0.0 0.0 0.0 4.989938282519555 0.0 11 0.0 0.0 0.0 5.946769725597178 0.0 12 0.0 0.0 0.0 7.166132006365404 0.0 13 0.0 0.0 0.0 7.482381469600141 0.0 14 0.0 0.0 0.0 7.613562689972804 0.0 15 0.0 0.0 0.0 7.890407268012158 0.0 16 0.0 0.0 0.0 8.421194439532867 0.0 17 0.0 0.0 0.0 9.132839930283664 0.0 18 0.0 0.0 0.0 9.852231680517315 0.0 19 0.0 0.0 0.0 10.328626638712773 0.0 20 0.0 0.0 0.0 10.756186482777203 0.0 21 0.0 0.0 0.0 11.360563119385015 0.0 22 0.0 0.0 0.0 12.006028610641003 0.0 23 0.0 0.0 0.0 12.664965857519345 0.0 24 0.0 0.0 0.0 13.16224203692945 0.0 25 0.0 0.0 0.0 13.59788493436729 0.0 26 0.0 0.0 0.0 14.022582030361969 0.0 27 0.0 0.0 0.0 14.44660553857553 0.0 28 0.0 0.0 0.0 14.906834390024166 0.0 29 0.0 0.0 0.0 15.373293928448138 0.0 30 0.0 0.0 0.0 15.912669344178097 0.0 31 0.0 0.0 0.0 16.453223538525013 0.0 32 0.0 0.0 0.0 16.936185977586366 0.0 33 0.0 0.0 0.0 17.426726279185296 0.0 34 0.0 0.0 0.0 17.87567253530021 0.0 35 0.0 0.0 0.0 18.36335008882939 0.0 36 0.0 0.0 0.0 18.874098023861848 0.0 37 0.0 0.0 0.0 19.36665908880413 0.0 38 0.0 0.0 0.0 19.858546565965295 0.0 39 0.0 0.0 0.0 20.361885035405457 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGCG 30 2.1637225E-6 45.000004 1 TCGTGCC 30 2.1637225E-6 45.000004 22 CGTCTCA 20 7.030529E-4 45.0 40 ACGGCCC 20 7.030529E-4 45.0 26 CGCTATT 20 7.030529E-4 45.0 35 TCCACCG 20 7.030529E-4 45.0 31 GCGATTA 40 6.8048394E-9 45.0 9 GCTAGCG 20 7.030529E-4 45.0 1 AACCTTC 20 7.030529E-4 45.0 23 CACCGGA 25 3.8885206E-5 45.0 31 CGCCGGT 20 7.030529E-4 45.0 28 CATCCGG 20 7.030529E-4 45.0 2 TACGGCT 315 0.0 44.285713 7 AGGCGAT 205 0.0 41.707317 7 CGTTATT 130 0.0 41.538464 1 ACACGAC 120 0.0 41.250004 26 GGAACGC 55 6.002665E-11 40.909092 8 CGAATAT 55 6.002665E-11 40.909092 14 CGTTTTA 105 0.0 40.714287 1 ATTACGG 50 1.0804797E-9 40.5 2 >>END_MODULE