SRR2936202.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936202.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	828188
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5682	0.686076108323231	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1754	0.21178766173863905	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1185	0.14308345448134963	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTACG	30	2.1647647E-6	45.000004	1
ACACGAT	20	7.032145E-4	45.0	27
CCTACGC	20	7.032145E-4	45.0	32
CGTTTTT	2335	0.0	42.301926	1
CGGTTTT	625	0.0	41.760002	1
TTAACGG	105	0.0	40.714287	2
CGTTATT	565	0.0	40.619465	1
TGCGATC	35	6.246173E-6	38.57143	36
TACACGG	70	0.0	38.57143	2
CGTTTTA	340	0.0	37.72059	1
GACCGAT	460	0.0	37.663044	9
CGTTCGA	30	1.1396463E-4	37.500004	14
TATCGCG	30	1.1396463E-4	37.500004	1
CGCACGG	90	0.0	37.5	2
ACAACGA	55	2.746674E-9	36.81818	13
TTGTCGC	55	2.746674E-9	36.81818	39
CCTCGAT	110	0.0	36.81818	15
TAGGGCG	220	0.0	36.81818	5
TAATCGT	55	2.746674E-9	36.81818	21
CTAACGG	80	0.0	36.5625	2